Man pages for dlemas/microbes
tools for analyzing microbiome data
| cog_cv_ra | Cog Core/Variable and Relative Abundance |
| crop_counts | Subsetting Counts dataframes by Metadata |
| dissim_vector | Morisita-Horne Similarity Combination Function |
| diversity_table_compare | this function |
| gene2pathway | gene2pathway |
| group_compare | Compare the OTU abundance by study group |
| heatmap_black | Geom_tile Graph |
| heatmap_no_black | Geom_tile Graph |
| meta_group_sort | [text] |
| meta_ID_error | This function determines which participant names do not match... |
| meta_ID_match | This function determines which participant names match... |
| meta_otu_sort | [text] |
| microbes-package | This package analyzes data from next generation 16S... |
| moveme | moveme |
| normalize_counts | This function normalizes the raw otu counts by participant to... |
| otu_abundance_compare | This function compares the relative abundance for each bug by... |
| poison_regression_permute | poison_regression_permute |
| prevalence_crop | Subset dataset by minimum OTU prevalence |
| transpose_counts | transpose_counts |
| Vector_graph_data | Compile Vectors into a graphable format |
| wgs_function | [Compiled wgs analyisis |
