Man pages for dmenne/d13cbreath
Reads and Evaluates Gastric Emptying 13C Breath Test Data
| AddAllBreathTestRecords | Reads and saves multiple 13C Breath test records |
| AddRecord | Reads BreathID or IRIS records and writes parameters to... |
| AddSimulatedBreathTestRecord | Adds simulated breath test record to the database |
| BreathTestData | Data structure for saving into database |
| BreathTestPopulationFit | Breathtest population fit |
| BreathTestRecordToDatabase | Computes fit and writes a 13C record and extracted parameters... |
| ComputeAndSaveParameterizedFit | Reads 13C data from database, computes parameterized fit... |
| ComputeAndSaveWNFit | Compute and save Wagner-Nelson fit |
| CreateEmptyBreathTestDatabase | Create an empty SQLite database for breath test data |
| CreateSimulatedBreathTestDatabase | Creates a database with simulated breath tests |
| CumExpBeta | Cumulative Exponential Beta function |
| DecisionPlot | DecisionPlot: 2D contour plot of breath-test variables |
| DeviceType | Guess device type of a text file |
| DOBToPDR | Convert DOB to PDR |
| ExpBeta | Exponential beta function to fit 13C breath test PDR |
| ExtractID | Extracts an ID from string IRIS CSV file |
| GetPopulationData | Read Population data from database |
| MarkedRecords | Reads Setting table |
| OpenSqliteConnection | Opens sqlite database connection |
| Plot13CRecord | Plot a 13C record and fit results |
| ReadBreathId | Read BreathID file |
| ReadIris | Read 13C data from IRIS/Wagner Analysen in composite format |
| ReadIrisCSV | Read 13C data from IRIS/Wagner Analysen in CSV Format |
| RebuildFitDatabase | Recompute all fit parameters |
| RebuildPopulationFitDatabase | Recompute population fit and store results in database |
| RunShiny | Runs Shiny app to display data |
| SaveBreathTestParameters | Saves Breath Test Parameters to Database |
| SavePopulationFit | Save population fit to breath test data |
| SimulateBreathId | Simulated BreathID record for testing |
| Summary13CRecord | Summary data from a 13C Record |
| t50BluckCoward | Self-corrected t_50 |
| t50Maes | t50 as determined from an uncorrected fit to the beta... |
| t50MaesScintigraphy | t50 from Maes with scintigrapic correction |
| tLagBluckCoward | Lag phase for BluckCoward self-correcting fit |
| tLagMaes | So-called lag time from Maes/Ghoos fit |
| UnzipBreathID | Unpacks a BreathID zip-File |
