dmuijen/mapfuser: Construct Consensus Genetic Maps and Estimate Recombination Rates

Construct consensus genetic maps with LPmerge, see Endelman and Plomion (2014) <doi:10.1093/bioinformatics/btu091> and model the relationship between physical distance and genetic distance using thin-plate regression splines, see Wood (2003) <doi:10.1111/1467-9868.00374>. Perform quality control on input data and visualise intermediate steps.

Getting started

Package details

AuthorDennis van Muijen, Ram Kumar Basnet, Nathalie J. Dek
MaintainerDennis van Muijen <[email protected]>
LicenseGPL-3
Version0.1.2.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("dmuijen/mapfuser")
dmuijen/mapfuser documentation built on Nov. 18, 2017, 12:53 p.m.