ExportSvTSdistRegionbyCell: Export Sv and TS distribution by region-cell from a folder of...

In dmwarn/openacoustics: Tools For Processing Echosounder Data With Reproducibility

Export Sv and TS distribution by region-cell from a folder of EV files.

Description

This function runs region-by cell exports of Sv and TS frequency distribution for EV files identified in a single folder selected by the user and exports them to the output directory selected by the user. Can of course be used to process multiple folders of data with additional code. The function also exports

Usage

ExportSvTSdistRegionbyCell(
  lake,
  year,
  dat.dir,
  exp.dir,
  SvacoVarName,
  TSacoVarName,
  regionClassName
)

Arguments

lake	Two letter abbreviation for the lake from which data were collected. This must match the characters identifying the lake or survey in the EchoNet2Fish directory. For example, if the EchoNet2Fish processing folder is MI2019, the correct value for this parameter would be "MI".
year	Four digit year in which the data were collected. Used in directing output.
dat.dir	Parent directory in which one or more folders containing the EV files of interest are located.
exp.dir	Output directory for the Sv and TS files. Currently the intent is for the exported csv files to go to the Sv and TS directories in the EchoNet2Fish directories if the lake-year being processed. The Sv and TS directorys MUST exist already. The function does not create them. The function use the
SvacoVarName	The name of the Sv variable from which to export integration results.
TSacoVarName	The name of the single targets variable from which to export the single target frequency distribution.
regionClassName	The name of the class of the region(s) from which exports should be made.

Value

This function generates csv files of Sv and TS frequency distribution data with the result being one of these files for each EV file processed. The exported csv files are saved in an Sv and TS subfolder of the year-lake specific EchoNet2Fish subfolder.

References

http://support.echoview.com/WebHelp/Echoview.htm/

dmwarn/openacoustics documentation built on Jan. 29, 2023, 9:45 p.m.