splitTips: Parse tip labels into a dataframe with multiple columns for...
In domingoscardoso/catGenes: Concatenating multiple DNA alignments and other phylogenetic features
splitTips R Documentation
Parse tip labels into a dataframe with multiple columns for each content
Description
This function is designed to split tip labels into a dataframe
object. Each column in the dataframe corresponds to the genus, species,
infraspecific name, and associated voucher and GenBank information, whenever
available. If doubtful particles such as 'aff.' or 'cf.' are provided, they
will also be separated into a distinct column.
Usage
splitTips(tiplabels = NULL)
Arguments
tiplabels
A vector of tip labels from a phylogeny.
Value
A dataframe.
Author(s)
Domingos Cardoso
Examples
## Not run:
library(catGenes)
data(Harpalyce_bayes_tree)
df <- splitTips(tiplabels = Harpalyce_bayes_tree@phylo$tip.label)
## End(Not run)
domingoscardoso/catGenes documentation built on March 14, 2024, 9:21 p.m.
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| splitTips | R Documentation |
Parse tip labels into a dataframe with multiple columns for each content
Description
This function is designed to split tip labels into a dataframe object. Each column in the dataframe corresponds to the genus, species, infraspecific name, and associated voucher and GenBank information, whenever available. If doubtful particles such as 'aff.' or 'cf.' are provided, they will also be separated into a distinct column.
Usage
splitTips(tiplabels = NULL)
Arguments
tiplabels |
A vector of tip labels from a phylogeny. |
Value
A dataframe.
Author(s)
Domingos Cardoso
Examples
## Not run:
library(catGenes)
data(Harpalyce_bayes_tree)
df <- splitTips(tiplabels = Harpalyce_bayes_tree@phylo$tip.label)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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