write_cls: write GSEA phenotype data input file

Description Usage Arguments Details Value Examples

Description

only support continuous phenotype for now

Usage

1
write_cls(phenotype, path)

Arguments

phenotype

tibble. usually the return value of make_phenotype

path

string. path to output file

Details

Although GSEA doesn't require every variable in a .cls file to be the same length, I do. Since they should be used with the same expression data (such as GSE008.txt + GSE008.chip + GSE008.cls, on the other hand, let GSE006.txt and GSE007.txt use different variable in the same .cls file is definitely insane)

Value

logical scalar

Examples

1
`NULL`

dongzhuoer/qGSEA documentation built on Aug. 8, 2020, 9:40 a.m.