Plot AA data by mean
1 2 | AAplotByMean(AAdat, SampleIndices, clrs = 1, pchs = 3, MeanSubset = NA,
useMat = "log", cex = 0.5, ...)
|
AAdat |
An Autoantigen Array object |
SampleIndices |
The indices of the samples to be selected. |
clrs |
colors for the samples. If length 1 then they are all that color |
pchs |
point type for the samples. If length 1 then they are all that point type |
MeanSubset |
subset index of samples by which to order the means of the features |
useMat |
which data matrix to use for the data points. Currently, "log", "raw", and "resid" are available |
cex |
the size of the plotted points |
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