SimBCarray: SimBCarray.R Simulate Array Data

Description Usage Arguments Details Value

Description

The functions simulates array data under a block diagonal covariance matrix and a simple linear model for the sample specific means.

Usage

1
SimBCarray(SimBCdes)

Arguments

SimBCdes

A SimBCdes class object which contains:

  • N: number of samples

  • Pblock: number of feature blocks

  • BlockCovDF: Pblock length DF

    • p - number of features in block

    • rho - correlation

    • scale - scaling factor for covariance matrix

  • DesignMat: N x Q design matrix [Non-Full Rank for convenience]
    N samples and Q covariate design columns

  • BlockBetaMat: Q x Pblock matrix of model coefficients
    valid per block.

  • DesignDF: design dataframe with Q rows and columns:

    • name - variable name

    • type - factor of numeric

  • SampleNames: N length character vector for the sample names

  • FeatNames: P length character vector for the feature names

Details

add some details here

Value

A list containing:


dpgaile/Schmidt525 documentation built on May 15, 2019, 1:46 p.m.