Description Usage Arguments Details Value Author(s) References See Also Examples
These functions use the output from read_spectro
to calculate pigment concentrations.
1 2 | ritchie_2008(ws)
beer_eshel_1985(ws)
|
ws |
The output from |
Details to follow!
A list, with the following components:
A dataframe. The data used for the calculation
A dataframe. Calculated concentration(s)
Daniel Pritchard
Ritchie, R. J. 2008. Universal chlorophyll equations for estimating chlorophylls a, b, c, and d and total chlorophylls in natural assemblages of photosynthetic organisms using acetone, methanol, or ethanol solvents. Photosynthetica, 46: 115–126.
Beer, S. and Eshel, A. 1985. Determining phycoerythrin and phycocyanin concentrations in aqueous crude extracts of red algae. Australian Journal of Marine and Freshwater Research, 36: 785–792.
1 2 3 4 5 6 7 | fpath <- system.file("extdata", "test_spectro.xml", package="seaweedR")
dat <- read_spectro(file = fpath)
head(dat)
concPyco <- beer_eshel_1985(dat)
str(concPyco)
print(concPyco$data)
print(concPyco$conc)
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