PoissonRDP: Poisson Recursive Dyadic Partitioning
In dpwynne/mmnst: Multiscale Modeling of Neural Spike Trains
PoissonRDP R Documentation
Poisson Recursive Dyadic Partitioning
Description
Calculates the piecewise constant intensity function using penalized likelihood recursive dyadic partitioning method in a Poisson model.
Usage
PoissonRDP(sig, gamma)
Arguments
sig
a numeric vector determining the raw data, e.g., the heights (counts) of the histograms to be smoothed.
gamma
a scalar determining the penalty factor in the penalized likelihood method.
Value
A numeric vector of estimated c(t), the smoothed histogram of data.
Source
This code is based on MATLAB code from Kolaczyk and Nowak (2005). Drs. Kolaczyk and Nowak have agreed to allow our translation in the package.
References
Kolaczyk, E.D. and Nowak, R.D. (2004). Multiscale likelihood analysis and complexity penalized estimation, The Annals of Statistics, 32(2), 500-527. doi: 10.1214/009053604000000076.
Kolaczyk, E.D. and Nowak, R.D. (2005). Multiscale generalized linear models for nonparametric function estimation. Biometrika, 92(1), 119–133. doi: 10.1093/biomet/92.1.119.
dpwynne/mmnst documentation built on Aug. 1, 2023, 8:08 a.m.
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| PoissonRDP | R Documentation |
Poisson Recursive Dyadic Partitioning
Description
Calculates the piecewise constant intensity function using penalized likelihood recursive dyadic partitioning method in a Poisson model.
Usage
PoissonRDP(sig, gamma)
Arguments
sig |
a numeric vector determining the raw data, e.g., the heights (counts) of the histograms to be smoothed. |
gamma |
a scalar determining the penalty factor in the penalized likelihood method. |
Value
A numeric vector of estimated c(t), the smoothed histogram of data.
Source
This code is based on MATLAB code from Kolaczyk and Nowak (2005). Drs. Kolaczyk and Nowak have agreed to allow our translation in the package.
References
Kolaczyk, E.D. and Nowak, R.D. (2004). Multiscale likelihood analysis and complexity penalized estimation, The Annals of Statistics, 32(2), 500-527. doi: 10.1214/009053604000000076.
Kolaczyk, E.D. and Nowak, R.D. (2005). Multiscale generalized linear models for nonparametric function estimation. Biometrika, 92(1), 119–133. doi: 10.1093/biomet/92.1.119.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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