MbkmeansParam: Mini-batch k-means clustering

In drisso/mbkmeans: Mini-batch K-means Clustering for Single-Cell RNA-seq

Mini-batch k-means clustering

Description

Run the mini-batch k-means mbkmeans function with the specified number of centers within clusterRows from the bluster Bioconductor package.

Usage

MbkmeansParam(centers, ...)

Arguments

centers	An integer scalar specifying the number of centers. Alternatively, a function that takes the number of observations and returns the number of centers. Note, the mbkmeans function uses the argument clusters argument to represent this argument. However, we use centers to match
...	Further arguments to pass to mbkmeans.

Details

This function is deprecated. Please use the MbkmeansParam function in the bluster Bioconductor package.

drisso/mbkmeans documentation built on April 6, 2022, 4:33 a.m.