API for drostlab/homologr
Homology inference across multiple species
| Global functions | |
|---|---|
| check_annotation_file_completeness | Man page Source code |
| codon_aln | Man page Source code |
| diamond_best_hits | Man page Source code |
| diamond_reciprocal_best_hits | Man page Source code |
| dnds | Man page Source code |
| dnds_across_multiple_species | Man page Source code |
| dnds_across_multiple_species_plot | Man page Source code |
| extract_features | Man page Source code |
| filter_best_hits | Man page Source code |
| import_cds | Man page Source code |
| import_dnds_across_multiple_species | Man page Source code |
| import_dnds_tbl | Man page Source code |
| import_proteome | Man page Source code |
| internal_dnds | Man page Source code |
| internal_import_dnds_across_multiple_species | Man page Source code |
| is_codon_aln_tool | Source code |
| is_dna_sequence | Source code |
| is_dnds_estimator | Source code |
| is_ortho_detection_method | Source code |
| is_pairwise_aln_tool | Source code |
| pairwise_aln | Man page Source code |
| select_best_splice_variants | Man page Source code |
| substitutionrate | Man page Source code |
| transl | Man page Source code |
| transl_cds_to_aa | Man page Source code |
