TestCNV: Computes the Bayes Factor in favour of a CNV defined by...
In drramki-chop/edm: Scalable workflow to identify copy Number variants from exome sequencing data
Description
Usage
Arguments
Value
Description
Test what evidence supports the presence of a CNV in an ExomeDepth object.
Usage
1
Arguments
x
ExomeDepth object containing the likelihood information.
chromosome
Chromosome data (factor)
start
Start of the putative CNV
end
End of the putative CNV
type
character, Should be either 'deletion' or 'duplication'
Value
A Bayes factor assessing the evidence in favoor of the CNV.
drramki-chop/edm documentation built on June 6, 2020, 8:48 a.m.
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Description Usage Arguments Value
Description
Test what evidence supports the presence of a CNV in an ExomeDepth object.
Usage
1 |
Arguments
x |
ExomeDepth object containing the likelihood information. |
chromosome |
Chromosome data ( |
start |
Start of the putative CNV |
end |
End of the putative CNV |
type |
|
Value
A Bayes factor assessing the evidence in favoor of the CNV.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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