GalaxyConfig-class: Class '"GalaxyConfig"'

Description Usage Arguments Methods See Also Examples

Description

Represents information about the configuration of Galaxy.

Usage

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GalaxyConfig(galaxyHome, toolDir, sectionName, sectionId)

Arguments

galaxyHome

Required. The full path to your Galaxy distribution.

toolDir

Required. The directory where the files associated with your function will reside.

sectionName

Required A friendly name for the section of Galaxy tools that will contain your function. Multiple tools can be in a single section; section names are headings in the left-hand side of the Galaxy window. If multiple tools are to reside in the same section, they must have identical values for sectionName and sectionId.

sectionId

An internal identifier for the section of Galaxy tools that will contain your function. If multiple tools are to reside in the same section, they must have identical values for sectionName and sectionId.

Methods

No methods defined with class "GalaxyConfig" in the signature.

See Also

link{galaxy}, GalaxyOutput

Examples

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GalaxyConfig(galaxyHome=getwd(), toolDir="mytool", sectionName="Test Section",
    sectionId="testSectionId")

dtenenba/RGalaxy_refactor documentation built on May 13, 2017, 8:41 a.m.