| ctmc.sim | Simulation of a CTMC path. | 
| int.states.sim | Simulation of internal node states on a phylogenetic tree. | 
| joint.postmean.moments.phylojumps | Joint moments of the posterior mean of labeled substitution... | 
| joint.post.moments.phylojumps | Joint posterior moments of labeled substitution counts on a... | 
| joint.prior.moments.phylojumps | Joint prior moments of labeled substitution counts on a... | 
| moments.ctmcjumps | Restricted factorial moments of labeled substitution counts... | 
| phylojumps.sim | Simulation of substitution counts on a phylogenetic tree. | 
| phylomoments | phylomoments: Efficient computations of phylogenetic... | 
| postmean.moments.phylojumps | Moments of the posterior mean of labeled substitution counts... | 
| post.moments.phylojumps | Posterior moments of labeled substitution counts on a... | 
| prior.moments.phylojumps | Prior moments of labeled substitution counts on a... | 
| tips.sim | Simulation of terminal node states on a phylogenetic tree. | 
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