Man pages for dutchjes/MSMSsim
Functions for processing HRMS2 spectra from output from RMassBank, mainly for calculating spectral similarity
| breakdown | Title |
| filterMerge | Merging of spectra |
| fragCountSim | Wrapper function |
| getCutoff | Function to get the Similarity Score Threshold for desired... |
| mergedCEdata | Merged CE data for comparison |
| mergedSpectra | Title |
| MSsim | Similarity score calculation |
| OrgMSSim | Calculates similarity score of two MSMS spectra using... |
| PandR | PandR function for looking at FPR vs. TPR. |
| PandRdat | Generation of PandR data for scenario evaluation |
| relCutoff | Relative intensity cutoff |
| ROC | ROC function for looking at FPR vs. TPR and graphing... |
| sameCEanalysis | Analysis of Single Collion Energies |
| sameCEdata | Producing the list for comparing MS/MS spectra from same CEs... |
| simTable | Builds the merged fragment table |
| simTableWeighting | Weighting of m/z and intensity |
| singleCESpectra | spectra from single CE function |
