relCutoff: Relative intensity cutoff
In dutchjes/MSMSsim: Functions for processing HRMS2 spectra from output from RMassBank, mainly for calculating spectral similarity
Description
Usage
Arguments
Value
Description
Relative intensity cutoff
Usage
1
relCutoff(alignment, b = 0.01, replace.na = 0)
Arguments
alignment
merged fragment table, for example output from simTable()
b
relative intensity cutoff, default is 0.05. all intensities below this value will be replaced with 0.
Value
data frame with fragment m/z values, intensity in MSMS spectrum 1, and intensity in MSMS spectrum 2
dutchjes/MSMSsim documentation built on June 29, 2019, 12:12 a.m.
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Description Usage Arguments Value
Description
Relative intensity cutoff
Usage
1 | relCutoff(alignment, b = 0.01, replace.na = 0)
|
Arguments
alignment |
merged fragment table, for example output from simTable() |
b |
relative intensity cutoff, default is 0.05. all intensities below this value will be replaced with 0. |
Value
data frame with fragment m/z values, intensity in MSMS spectrum 1, and intensity in MSMS spectrum 2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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