revdep/README.md
In duthedd/ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics
Setup
Platform
|setting |value |
|:--------|:----------------------------|
|version |R version 3.3.1 (2016-06-21) |
|system |x86_64, darwin13.4.0 |
|ui |X11 |
|language |(EN) |
|collate |en_US.UTF-8 |
|tz |America/Mexico_City |
|date |2016-11-07 |
Packages
|package | |version |date |source |
|:-------------|:--|:----------|:----------|:------------------------------|
|covr | |2.2.1 |2016-08-10 |cran (@2.2.1) |
|digest | |0.6.10 |2016-08-02 |cran (@0.6.10) |
|ggplot2 | |2.1.0 |2016-03-01 |cran (@2.1.0) |
|ggplot2movies | |0.0.1 |2015-08-25 |cran (@0.0.1) |
|gtable | |0.2.0 |2016-02-26 |cran (@0.2.0) |
|hexbin | |1.27.1 |2015-08-19 |cran (@1.27.1) |
|Hmisc | |4.0-0 |2016-11-01 |cran (@4.0-0) |
|knitr | |1.14.15 |2016-11-07 |Github (yihui/knitr@8cbc61a) |
|lazyeval | |0.2.0 |2016-06-12 |cran (@0.2.0) |
|mapproj | |1.2-4 |2015-08-03 |cran (@1.2-4) |
|maps | |3.1.1 |2016-07-27 |cran (@3.1.1) |
|maptools | |0.8-39 |2016-01-30 |cran (@0.8-39) |
|multcomp | |1.4-6 |2016-07-14 |cran (@1.4-6) |
|plyr | |1.8.4 |2016-06-08 |cran (@1.8.4) |
|quantreg | |5.29 |2016-09-04 |cran (@5.29) |
|reshape2 | |1.4.2 |2016-10-22 |cran (@1.4.2) |
|rmarkdown | |1.1 |2016-10-16 |cran (@1.1) |
|scales | |0.4.0.9003 |2016-10-25 |Github (hadley/scales@d58d83a) |
|svglite | |1.2.0 |2016-11-04 |cran (@1.2.0) |
|testthat | |1.0.2 |2016-04-23 |cran (@1.0.2) |
|tibble | |1.2 |2016-08-26 |cran (@1.2) |
Check results
967 packages
|package |version | errors| warnings| notes|
|:-----------------------|:-------------|------:|--------:|-----:|
|abctools |1.0.4 | 0| 0| 0|
|abd |0.2-8 | 0| 0| 0|
|ABHgenotypeR |1.0.1 | 0| 0| 0|
|ACDm |1.0.4 | 0| 0| 0|
|ACSNMineR |0.16.8.25 | 0| 0| 0|
|adapr |1.0 | 0| 0| 1|
|AdaptGauss |1.2.4 | 0| 0| 0|
|adegenet |2.0.1 | 0| 0| 0|
|admixturegraph |1.0.1 | 0| 0| 0|
|advclust |0.4 | 0| 0| 0|
|AFM |1.2.2 | 0| 0| 0|
|aimPlot |1.0.0 | 0| 0| 0|
|alakazam |0.2.5 | 0| 0| 0|
|AlignStat |1.3.1 | 0| 0| 0|
|alm |0.4.0 | 0| 0| 2|
|alphahull |2.1 | 0| 0| 0|
|ameco |0.2.3 | 0| 0| 1|
|AmpliconDuo |1.1 | 0| 0| 0|
|AmyloGram |1.0 | 0| 0| 0|
|ANOM |0.4.3 | 0| 0| 0|
|antitrust |0.95.1 | 0| 0| 0|
|aop |1.0.0 | 1| 0| 0|
|aoristic |0.6 | 0| 0| 2|
|apsimr |1.2 | 0| 0| 1|
|archetypes |2.2-0 | 0| 0| 2|
|archivist |2.1 | 1| 0| 2|
|ARPobservation |1.1 | 0| 0| 1|
|ARTool |0.10.4 | 0| 0| 0|
|asremlPlus |2.0-12 | 0| 0| 1|
|asVPC |1.0.2 | 0| 0| 1|
|automap |1.0-14 | 0| 0| 2|
|BACA |1.3 | 1| 0| 0|
|BacArena |1.5.1 | 0| 0| 2|
|BACCT |1.0 | 1| 0| 0|
|backShift |0.1.3 | 1| 0| 0|
|bamdit |3.0.0 | 1| 0| 0|
|bayesAB |0.7.0 | 0| 0| 0|
|bayesbio |1.0.0 | 0| 0| 0|
|BBEST |0.1-6 | 0| 0| 0|
|bbmle |1.0.18 | 0| 0| 0|
|BCEA |2.2-3 | 1| 0| 1|
|BCellMA |0.1 | 0| 0| 0|
|Bclim |3.1.0 | 0| 0| 0|
|bcp |4.0.0 | 0| 0| 1|
|bcrm |0.4.6 | 1| 0| 1|
|bde |1.0.1 | 0| 0| 1|
|bdscale |2.0.0 | 0| 0| 0|
|bdvis |0.2.6 | 0| 0| 0|
|benchmark |0.3-6 | 0| 0| 4|
|benchmarkme |0.3.0 | 0| 0| 0|
|benchmarkmeData |0.3.0 | 0| 0| 0|
|bife |0.1 | 0| 0| 0|
|binom |1.1-1 | 0| 0| 3|
|biogas |1.4.0 | 0| 0| 0|
|biogram |1.3 | 0| 1| 0|
|Biograph |2.0.6 | 0| 0| 0|
|bioinactivation |1.1.3 | 0| 0| 0|
|biomod2 |3.3-7 | 0| 0| 0|
|BioPET |0.2.0 | 1| 0| 0|
|bioplots |0.0.1 | 0| 0| 0|
|BioStatR |2.0.0 | 0| 0| 1|
|BlandAltmanLeh |0.3.1 | 0| 1| 0|
|blkbox |1.0 | 0| 0| 2|
|blockseg |0.2 | 0| 0| 0|
|blscrapeR |1.0.2 | 0| 0| 0|
|bmlm |1.2.1 | 0| 0| 1|
|bmmix |0.1-2 | 0| 0| 2|
|bodenmiller |0.1 | 0| 0| 1|
|bootnet |0.3 | 0| 0| 0|
|braidReports |0.5.3 | 0| 0| 0|
|brainGraph |0.72.0 | 1| 0| 0|
|breakpoint |1.2 | 0| 0| 0|
|bridgedist |0.1.0 | 0| 0| 0|
|brms |1.1.0 | 1| 0| 0|
|broman |0.64-3 | 0| 0| 0|
|broom |0.4.1 | 0| 0| 0|
|brotli |0.8 | 0| 0| 0|
|bsam |1.1.0 | 1| 0| 0|
|BTSPAS |2014.0901 | 1| 0| 1|
|burnr |0.1.1 | 0| 0| 0|
|CALF |0.1.3 | 0| 0| 0|
|capm |0.9.1 | 0| 0| 0|
|caret |6.0-72 | 0| 0| 1|
|caretEnsemble |2.0.0 | 0| 0| 0|
|cate |1.0.4 | 1| 0| 0|
|catenary |1.1.1 | 0| 0| 0|
|Causata |4.2-0 | 0| 0| 5|
|cda |2.0.0 | 0| 0| 0|
|cdom |0.1.0 | 0| 0| 0|
|ChainLadder |0.2.3 | 0| 0| 0|
|ChannelAttributionApp |1.1 | 0| 0| 1|
|ChaosGame |0.2 | 0| 0| 0|
|checkmate |1.8.2 | 0| 0| 0|
|choroplethr |3.5.2 | 0| 1| 0|
|choroplethrAdmin1 |1.1.0 | 0| 0| 1|
|choroplethrMaps |1.0 | 0| 0| 0|
|chron |2.3-47 | 0| 0| 0|
|CINOEDV |2.0 | 0| 0| 1|
|cjoint |2.0.4 | 0| 0| 0|
|classify |1.3 | 1| 0| 0|
|classyfire |0.1-2 | 0| 0| 1|
|clhs |0.5-6 | 0| 0| 0|
|clifro |3.0-0 | 0| 1| 0|
|ClimClass |2.1.0 | 0| 0| 0|
|climwin |1.0.0 | 0| 0| 0|
|clusterfly |0.4 | 1| 0| 0|
|clusternomics |0.1.0 | 0| 0| 0|
|ClusterR |1.0.3 | 0| 0| 0|
|clustrd |1.0.2 | 1| 0| 0|
|cmaesr |1.0.2 | 0| 0| 0|
|cobalt |1.3.0 | 0| 0| 0|
|cocoreg |0.1.0 | 0| 0| 0|
|codingMatrices |0.2.1 | 0| 0| 0|
|codyn |1.1.0 | 0| 0| 0|
|coefplot |1.2.4 | 0| 0| 0|
|cofeatureR |1.0.1 | 0| 0| 0|
|CollapsABEL |0.10.8 | 1| 0| 0|
|coloc |2.3-1 | 0| 1| 2|
|colormap |0.1.3 | 0| 0| 0|
|colorplaner |0.1.3 | 0| 0| 0|
|CommT |0.1.1 | 0| 0| 1|
|complmrob |0.6.1 | 0| 0| 0|
|confidence |1.1-0 | 0| 0| 1|
|conformal |0.2 | 0| 0| 0|
|Conigrave |0.1.0 | 0| 0| 0|
|contoureR |1.0.5 | 0| 0| 0|
|cooccur |1.3 | 0| 0| 0|
|CopulaDTA |0.0.4 | 0| 1| 0|
|corkscrew |1.1 | 0| 0| 0|
|corrr |0.2.1 | 1| 0| 0|
|cosinor |1.1 | 0| 0| 1|
|CosmoPhotoz |0.1 | 0| 0| 1|
|countytimezones |1.0.0 | 0| 0| 0|
|countyweather |0.1.0 | 0| 0| 0|
|covmat |1.0 | 0| 0| 0|
|cowplot |0.7.0 | 0| 0| 0|
|cplm |0.7-4 | 0| 0| 0|
|crawl |2.0.1 | 0| 0| 0|
|cricketr |0.0.13 | 0| 0| 0|
|crmPack |0.2.0 | 1| 0| 0|
|Crossover |0.1-16 | 1| 0| 0|
|CRTgeeDR |1.2 | 0| 0| 0|
|csp |0.1.0 | 0| 0| 1|
|cutoffR |1.0 | 0| 0| 1|
|cvxclustr |1.1.1 | 0| 0| 2|
|Cyclops |1.2.2 | 0| 0| 0|
|cystiSim |0.1.0 | 0| 0| 0|
|dae |2.7-20 | 0| 0| 0|
|dams |0.2 | 0| 0| 0|
|darch |0.12.0 | 0| 0| 2|
|darksky |1.0.0 | 0| 0| 0|
|data.table |1.9.6 | 1| 0| 0|
|DataExplorer |0.2.6 | 0| 0| 0|
|dcmr |1.0 | 0| 0| 1|
|ddpcr |1.5 | 0| 1| 0|
|Deducer |0.7-9 | 1| 0| 0|
|DeLorean |1.2.4 | 0| 0| 0|
|demi |1.1.2 | 1| 0| 0|
|dendextend |1.3.0 | 0| 0| 2|
|DengueRT |1.0.1 | 0| 0| 0|
|DepthProc |1.0.7 | 0| 0| 0|
|DescribeDisplay |0.2.5 | 0| 0| 0|
|detzrcr |0.1.2 | 0| 0| 0|
|dfexplore |0.2.1 | 0| 0| 1|
|DFIT |1.0-2 | 0| 0| 1|
|dfpk |1.0 | 0| 0| 0|
|dggridR |0.1.11 | 0| 0| 0|
|diagis |0.1.0 | 0| 0| 0|
|DiallelAnalysisR |0.1.1 | 0| 0| 0|
|dielectric |0.2.3 | 0| 0| 3|
|diffeR |0.0-4 | 0| 0| 0|
|difNLR |0.1.0 | 0| 0| 0|
|directlabels |2015.12.16 | 0| 0| 0|
|disclapmix |1.6.2 | 0| 0| 0|
|diveRsity |1.9.89 | 0| 0| 1|
|DiversityOccupancy |1.0.5 | 1| 0| 0|
|dlstats |0.0.9 | 0| 0| 0|
|dMod |0.3.2 | 0| 0| 0|
|doBy |4.5-15 | 0| 0| 0|
|DoTC |0.2 | 0| 0| 0|
|dotwhisker |0.2.2 | 0| 0| 0|
|dpcR |0.3 | 0| 0| 0|
|dplyr |0.5.0 | 0| 0| 1|
|DrBats |0.1.4 | 0| 0| 0|
|drLumi |0.1.2 | 0| 0| 0|
|dslice |1.1.5 | 0| 0| 0|
|dsm |2.2.13 | 0| 0| 0|
|DstarM |0.1.0 | 0| 0| 0|
|DTR |1.7 | 0| 0| 0|
|DTRlearn |1.2 | 0| 0| 0|
|dtwclust |2.3.0 | 0| 0| 0|
|dtwSat |0.2.1 | 0| 0| 0|
|DVHmetrics |0.3.6 | 0| 0| 0|
|DynNom |3.0.1 | 1| 0| 0|
|dynr |0.1.7 | 1| 0| 0|
|dynsim |1.2.1 | 0| 0| 0|
|dynsurv |0.3-3 | 0| 0| 0|
|earlywarnings |1.0.59 | 0| 0| 2|
|earthtones |0.1.0 | 0| 0| 0|
|EasyHTMLReport |0.1.1 | 0| 0| 3|
|ecb |0.2 | 1| 1| 0|
|ecoengine |1.10.0 | 0| 0| 0|
|EcoGenetics |1.2.0-3 | 0| 0| 0|
|ecr |1.0.1 | 0| 0| 0|
|edarf |1.0.0 | 0| 0| 0|
|edeaR |0.4.4 | 0| 0| 0|
|edfReader |1.1.1 | 0| 0| 0|
|edgar |1.0.6 | 0| 0| 0|
|eechidna |0.1 | 1| 0| 0|
|EEM |1.1.1 | 0| 0| 0|
|eemR |0.1.4 | 0| 0| 0|
|eeptools |1.0.0 | 0| 0| 0|
|EFDR |0.1.1 | 0| 0| 1|
|EffectLiteR |0.4-2 | 0| 0| 0|
|ega |1.0.1 | 0| 0| 0|
|egcm |1.0.8 | 0| 0| 0|
|eiCompare |1.7 | 0| 0| 0|
|emil |2.2.6 | 0| 0| 0|
|emojifont |0.3.4 | 0| 1| 1|
|EmpiricalCalibration |1.2.0 | 0| 0| 0|
|emuR |0.1.9 | 0| 0| 0|
|enigma |0.2.0 | 0| 0| 0|
|enpls |5.0 | 0| 0| 0|
|EpiDynamics |0.3.0 | 0| 0| 0|
|episensr |0.7.2 | 0| 0| 0|
|episheet |0.2.0 | 0| 0| 0|
|ESGtoolkit |0.1 | 0| 0| 2|
|etl |0.3.3.1 | 0| 0| 0|
|etm |0.6-2 | 0| 0| 2|
|eurostat |2.2.1 | 0| 0| 0|
|evaluate |0.10 | 0| 0| 0|
|evolqg |0.2-4 | 0| 0| 0|
|Evomorph |0.9 | 0| 0| 0|
|explor |0.2.1 | 0| 0| 0|
|exploreR |0.1 | 0| 0| 0|
|exreport |0.4.1 | 0| 0| 0|
|ExtDist |0.6-3 | 0| 0| 1|
|extracat |1.7-4 | 0| 0| 0|
|eyelinker |0.1 | 0| 0| 0|
|eyetrackingR |0.1.6 | 0| 0| 0|
|ez |4.4-0 | 0| 0| 0|
|ezsim |0.5.5 | 0| 0| 2|
|factoextra |1.0.3 | 1| 0| 1|
|FAOSTAT |2.0 | 0| 0| 1|
|fbroc |0.4.0 | 0| 0| 0|
|fermicatsR |1.4 | 0| 0| 0|
|FField |0.1.0 | 0| 0| 2|
|Fgmutils |0.9.4 | 1| 0| 0|
|fheatmap |1.0.1 | 1| 0| 1|
|FinCal |0.6.3 | 0| 0| 0|
|findviews |0.1.2 | 0| 0| 0|
|fishmove |0.3-3 | 0| 0| 1|
|fitbitScraper |0.1.7 | 0| 1| 0|
|fitcoach |1.0 | 0| 0| 0|
|flowr |0.9.10 | 0| 0| 0|
|forcats |0.1.1 | 0| 0| 0|
|forecast |7.3 | 0| 0| 0|
|forestmodel |0.4.0 | 0| 0| 0|
|fractional |0.1.3 | 0| 0| 0|
|frailtySurv |1.2.2.1 | 0| 0| 0|
|FREddyPro |1.0 | 0| 0| 0|
|freqparcoord |1.0.1 | 0| 0| 0|
|FreqProf |0.0.1 | 0| 0| 0|
|freqweights |1.0.2 | 0| 0| 1|
|frontiles |1.2 | 0| 0| 1|
|fSRM |0.6.4 | 0| 0| 0|
|funModeling |1.4 | 1| 0| 0|
|funrar |1.0.1 | 0| 0| 0|
|futureheatwaves |1.0.1 | 0| 0| 0|
|fuzzyforest |1.0.2 | 1| 0| 0|
|fuzzyjoin |0.1.2 | 0| 0| 0|
|G2Sd |2.1.5 | 1| 0| 0|
|gapfill |0.9.3 | 2| 0| 2|
|gapmap |0.0.4 | 0| 0| 0|
|gapminder |0.2.0 | 0| 0| 0|
|gcerisk |16.1.3 | 0| 0| 0|
|gcookbook |1.0 | 0| 0| 0|
|GDAdata |0.93 | 0| 0| 0|
|GenCAT |1.0.3 | 1| 1| 3|
|gender |0.5.1 | 0| 0| 1|
|geneSLOPE |0.37.0 | 0| 0| 0|
|genomeplot |1.0 | 0| 0| 0|
|geoknife |1.4.0 | 0| 0| 0|
|geomnet |0.1.2.1 | 1| 0| 0|
|GERGM |0.10.0 | 0| 0| 0|
|GetHFData |1.2.0 | 0| 0| 0|
|GetTDData |1.2.4 | 0| 0| 0|
|gettingtothebottom |3.2 | 0| 0| 1|
|gfcanalysis |1.4 | 0| 0| 0|
|GGally |1.2.0 | 2| 0| 1|
|ggalt |0.1.1 | 1| 0| 0|
|ggbeeswarm |0.5.0 | 0| 0| 0|
|ggcorrplot |0.1.1 | 0| 0| 0|
|ggdendro |0.1-20 | 0| 0| 0|
|ggdmc |0.1.3.5 | 0| 0| 0|
|ggenealogy |0.2.0 | 0| 1| 0|
|ggExtra |0.5 | 1| 1| 0|
|ggfortify |0.2.0 | 1| 0| 1|
|ggghost |0.2.1 | 0| 0| 0|
|ggiraph |0.3.2 | 0| 0| 0|
|gglogo |0.1.2 | 0| 0| 0|
|ggloop |0.1.0 | 0| 0| 0|
|ggmap |2.6.1 | 0| 0| 0|
|ggmcmc |1.1 | 0| 0| 0|
|ggnetwork |0.5.1 | 2| 1| 0|
|ggparallel |0.1.2 | 0| 0| 0|
|ggpmisc |0.2.12 | 1| 1| 0|
|ggpolypath |0.1.0 | 0| 0| 0|
|ggpubr |0.1.0 | 1| 0| 0|
|ggRandomForests |2.0.1 | 0| 0| 0|
|ggraptR |0.1 | 0| 0| 0|
|ggrepel |0.6.3 | 0| 0| 0|
|ggROC |1.0 | 0| 0| 3|
|ggsci |1.5 | 0| 0| 0|
|ggseas |0.5.1 | 0| 0| 0|
|ggsn |0.3.1 | 0| 0| 0|
|ggspectra |0.1.10 | 0| 0| 0|
|ggswissmaps |0.1.1 | 0| 0| 0|
|ggtern |2.1.4 | 1| 0| 0|
|ggThemeAssist |0.1.5 | 0| 0| 0|
|ggthemes |3.2.0 | 0| 0| 0|
|githubinstall |0.1.0 | 0| 0| 0|
|gitter |1.1.1 | 1| 0| 0|
|glinternet |1.0.0 | 0| 0| 1|
|glycanr |0.3.0 | 2| 0| 1|
|gmum.r |0.2.1 | 0| 0| 0|
|gmwm |2.0.0 | 0| 0| 1|
|gogamer |0.4.3 | 0| 0| 0|
|googlesheets |0.2.1 | 0| 0| 0|
|GOplot |1.0.2 | 0| 0| 0|
|gpmap |0.1.1 | 0| 0| 3|
|granovaGG |1.4.0 | 0| 0| 0|
|Greg |1.2 | 2| 1| 0|
|greport |0.7-1 | 1| 0| 0|
|gridDebug |0.5-0 | 1| 0| 0|
|gridExtra |2.2.1 | 0| 0| 0|
|gridsampler |0.5 | 0| 0| 0|
|growcurves |0.2.4.0 | 0| 0| 0|
|growfunctions |0.13 | 0| 0| 0|
|growthcurver |0.2.1 | 0| 0| 0|
|gsDesign |3.0-1 | 0| 0| 1|
|GSE |4.0 | 0| 0| 0|
|gtrendsR |1.3.5 | 0| 0| 0|
|gunsales |0.1.1 | 0| 0| 0|
|gutenbergr |0.1.2 | 0| 0| 0|
|gwdegree |0.1.1 | 0| 0| 0|
|gWQS |1.0.0 | 0| 0| 0|
|h2o |3.10.0.8 | 0| 0| 1|
|hazus |0.1 | 0| 0| 1|
|hBayesDM |0.2.3.1 | 0| 0| 0|
|hdm |0.2.0 | 0| 0| 0|
|hdnom |4.2 | 1| 1| 0|
|hdr |0.1 | 0| 0| 0|
|heatmaply |0.6.0 | 1| 1| 0|
|heemod |0.5.1 | 0| 0| 0|
|heuristica |1.0.1 | 0| 0| 0|
|hierarchicalDS |2.9 | 0| 0| 1|
|hierarchicalSets |1.0.2 | 0| 0| 1|
|highcharter |0.4.0 | 0| 0| 0|
|HighDimOut |1.0.0 | 0| 0| 1|
|HistData |0.7-8 | 0| 0| 1|
|HistDAWass |0.1.4 | 0| 0| 0|
|historydata |0.1 | 0| 0| 0|
|HiveR |0.2.55 | 0| 0| 0|
|HLMdiag |0.3.1 | 0| 0| 0|
|Hmisc |4.0-0 | 1| 0| 0|
|HRM |0.3.5 | 0| 0| 0|
|HTSSIP |1.0.3 | 1| 0| 0|
|httk |1.4 | 0| 0| 0|
|HWxtest |1.1.7 | 0| 0| 0|
|hybridModels |0.2.6 | 0| 0| 0|
|hyfo |1.3.6 | 0| 0| 0|
|hyperSpec |0.98-20150304 | 1| 1| 1|
|IAPWS95 |1.0.0 | 1| 0| 0|
|IAT |0.3 | 0| 0| 0|
|ibmdbR |1.48.0 | 1| 0| 0|
|icarus |0.2.2 | 0| 0| 0|
|icd9 |1.3.1 | 0| 0| 0|
|idm |1.7.1 | 1| 0| 0|
|ie2miscdata |1.0.1 | 0| 1| 1|
|ifaTools |0.13 | 0| 0| 0|
|IGM.MEA |0.3.4 | 0| 0| 0|
|imageData |0.1-26 | 1| 0| 0|
|imager |0.31 | 0| 1| 1|
|IMP |1.1 | 0| 0| 0|
|imputeTestbench |3.0.0 | 0| 0| 0|
|incidence |1.0.0 | 0| 0| 0|
|inctools |1.0.7 | 0| 0| 0|
|IncucyteDRC |0.5.4 | 0| 0| 0|
|iNEXT |2.0.9 | 0| 1| 0|
|Information |0.0.9 | 0| 0| 0|
|InformationValue |1.2.3 | 0| 0| 0|
|InSilicoVA |1.1.2 | 1| 0| 0|
|IntClust |0.0.2 | 1| 0| 0|
|IntegratedJM |1.4 | 0| 0| 0|
|IntegratedMRF |1.1.5 | 0| 0| 0|
|interplot |0.1.4 | 0| 0| 0|
|intsvy |1.9 | 0| 0| 0|
|IPtoCountry |0.0.1 | 0| 0| 0|
|ITEMAN |1.0 | 0| 0| 0|
|iWISA |1.0-2 | 0| 0| 0|
|JacobiEigen |0.2-2 | 0| 0| 0|
|JWileymisc |0.2.1 | 0| 0| 0|
|kamila |0.1.1.1 | 0| 0| 0|
|kdetrees |0.1.5 | 0| 0| 1|
|kfigr |1.2 | 0| 0| 0|
|Kmisc |0.5.0 | 0| 0| 1|
|knitrBootstrap |1.0.0 | 0| 0| 0|
|kobe |1.3.2 | 0| 0| 1|
|KSD |1.0.0 | 0| 0| 0|
|Lahman |5.0-0 | 0| 0| 1|
|LambertW |0.6.4 | 0| 0| 0|
|LANDD |1.1.0 | 1| 0| 0|
|largeVis |0.1.9.1 | 0| 1| 0|
|latex2exp |0.4.0 | 0| 0| 0|
|lda |1.4.2 | 0| 0| 0|
|ldatuning |0.2.0 | 0| 0| 0|
|LDheatmap |0.99-2 | 1| 0| 0|
|LEAP |0.2 | 0| 0| 0|
|learningCurve |1.0 | 0| 0| 0|
|learnstats |0.1.1 | 0| 0| 1|
|LexisPlotR |0.3 | 0| 0| 0|
|likeLTD |6.1.1 | 0| 0| 0|
|likert |1.3.3 | 0| 0| 0|
|linear.tools |1.3.0 | 0| 0| 0|
|llama |0.9.1 | 1| 0| 0|
|lme4 |1.1-12 | 0| 0| 1|
|lmerTest |2.0-32 | 0| 0| 0|
|lmms |1.3.3 | 0| 0| 0|
|localgauss |0.35 | 1| 0| 0|
|LocFDRPois |1.0.0 | 0| 0| 1|
|logisticPCA |0.2 | 0| 0| 0|
|LOGIT |1.3 | 0| 0| 0|
|lsbclust |1.0.4 | 0| 0| 0|
|lsl |0.5.5 | 0| 0| 0|
|ltbayes |0.4 | 1| 0| 0|
|lvplot |0.2.0 | 0| 0| 0|
|MAc |1.1 | 0| 0| 4|
|macleish |0.3.0 | 0| 0| 0|
|MAd |0.8-2 | 0| 0| 4|
|maddison |0.1 | 0| 0| 0|
|magick |0.3 | 1| 0| 0|
|manhattanly |0.1.0 | 0| 1| 0|
|mapr |0.3.0 | 0| 0| 0|
|marked |1.1.11 | 0| 0| 0|
|marmap |0.9.5 | 0| 0| 0|
|matrixStats |0.51.0 | 0| 0| 0|
|MAVIS |1.1.2 | 0| 0| 0|
|MaxentVariableSelection |1.0-2 | 0| 0| 0|
|MCMC.OTU |1.0.10 | 0| 0| 0|
|MCMC.qpcr |1.2.2 | 0| 0| 0|
|mcprofile |0.2-3 | 0| 0| 0|
|mdsr |0.1.3 | 0| 0| 1|
|medicalrisk |1.2 | 0| 0| 0|
|medicare |0.1.0 | 0| 0| 0|
|MEGENA |1.3.5-2 | 0| 1| 1|
|MendelianRandomization |0.2.0 | 1| 0| 0|
|MergeGUI |0.2-1 | 1| 0| 0|
|merTools |0.2.1 | 0| 0| 0|
|metacoder |0.1.2 | 0| 0| 0|
|metagen |1.0 | 0| 0| 1|
|metaheur |0.2.0 | 0| 0| 0|
|MetaIntegrator |1.0.3 | 1| 0| 0|
|metaMix |0.2 | 1| 0| 0|
|metaplotr |0.0.3 | 0| 0| 0|
|meteogRam |1.0 | 0| 0| 1|
|Methplot |1.0 | 0| 0| 2|
|metricsgraphics |0.9.0 | 0| 0| 0|
|MGLM |0.0.7 | 0| 0| 0|
|mhtboot |1.3.3 | 0| 0| 0|
|microbenchmark |1.4-2.1 | 0| 0| 1|
|micromap |1.9.2 | 0| 0| 1|
|microplot |1.0-14 | 0| 0| 0|
|MiRAnorm |1.0.0 | 0| 0| 0|
|miscset |1.0.0 | 0| 0| 0|
|MissingDataGUI |0.2-5 | 1| 0| 0|
|mistat |1.0-4 | 0| 0| 1|
|mistral |2.1.0 | 0| 0| 0|
|MIXFIM |1.0 | 0| 0| 0|
|mixOmics |6.1.1 | 0| 0| 0|
|MixSIAR |3.1.7 | 2| 0| 0|
|mizer |0.2 | 0| 0| 1|
|mkin |0.9.44 | 0| 0| 0|
|mlmc |1.0.0 | 0| 0| 0|
|mlr |2.9 | 2| 0| 2|
|mlxR |3.1.0 | 0| 0| 0|
|Mobilize |2.16-4 | 0| 0| 1|
|modelr |0.1.0 | 0| 0| 0|
|Momocs |1.1.0 | 0| 0| 0|
|moonBook |0.1.3 | 0| 0| 2|
|morse |2.2.0 | 1| 0| 0|
|mosaic |0.14.4 | 0| 0| 2|
|mosaicData |0.14.0 | 0| 0| 0|
|mousetrap |2.0.0 | 0| 0| 0|
|moveHMM |1.2 | 0| 0| 0|
|mplot |0.7.9 | 0| 0| 1|
|mpoly |1.0.3 | 0| 0| 0|
|mrMLM |1.3 | 1| 0| 0|
|MRMR |0.1.4 | 0| 0| 0|
|MSCMT |1.0.0 | 0| 0| 0|
|MSG |0.3 | 0| 0| 0|
|MSGARCH |0.17 | 0| 0| 1|
|mtconnectR |1.0.1 | 1| 0| 0|
|MultiBD |0.2.0 | 0| 0| 0|
|multiDimBio |1.0.1 | 1| 0| 0|
|multilevelPSA |1.2.4 | 0| 0| 1|
|MultiMeta |0.1 | 0| 0| 1|
|multipanelfigure |0.8.3 | 0| 0| 0|
|munsell |0.4.3 | 0| 0| 0|
|musica |0.1.3 | 0| 0| 0|
|mvdalab |1.1 | 0| 0| 0|
|mvtboost |0.5.0 | 0| 0| 0|
|mwaved |1.1.4 | 1| 0| 0|
|myTAI |0.4.0 | 1| 0| 0|
|ncappc |0.2.1.1 | 0| 0| 0|
|NeatMap |0.3.6.2 | 0| 0| 2|
|netgen |1.3 | 0| 0| 0|
|networkreporting |0.1.1 | 0| 0| 0|
|NeuralNetTools |1.4.0 | 0| 0| 0|
|neuropsychology |0.2.4 | 0| 0| 0|
|NFP |0.99.1 | 1| 0| 0|
|nhstplot |1.0.0 | 0| 0| 0|
|nima |0.3.0 | 0| 0| 0|
|nimble |0.6-1 | 0| 0| 1|
|nlstimedist |1.0.1 | 0| 0| 0|
|NlsyLinks |2.0.6 | 0| 0| 1|
|nLTT |1.3.1 | 0| 0| 0|
|NMF |0.20.6 | 0| 0| 3|
|NNTbiomarker |0.29.11 | 0| 0| 0|
|NORRRM |1.0.0 | 0| 0| 1|
|nparACT |0.6 | 0| 0| 0|
|NPflow |0.10.1 | 0| 0| 0|
|npregfast |1.3.0 | 1| 0| 0|
|nullabor |0.3.1 | 0| 0| 1|
|nzelect |0.2.0 | 0| 0| 0|
|oapackage |2.0.23 | 0| 0| 0|
|oaPlots |0.0.25 | 0| 0| 0|
|oaxaca |0.1.3 | 0| 0| 0|
|obAnalytics |0.1.0 | 1| 1| 0|
|oddsratio |0.3.0 | 1| 1| 0|
|OECD |0.2.2 | 0| 0| 0|
|onlineCPD |1.0 | 1| 0| 0|
|OpasnetUtils |1.2.0 | 0| 0| 1|
|OpenStreetMap |0.3.3 | 1| 0| 0|
|openVA |1.0.1 | 1| 0| 0|
|optiRum |0.37.3 | 0| 0| 0|
|orderedLasso |1.7 | 0| 0| 2|
|orgR |0.9.0 | 0| 0| 0|
|OriGen |1.4.3 | 1| 0| 0|
|osmplotr |0.2.3 | 0| 0| 0|
|OutbreakTools |0.1-14 | 1| 1| 0|
|P2C2M |0.7.6 | 0| 0| 2|
|pa |1.2-1 | 0| 0| 2|
|packcircles |0.1.1 | 0| 0| 0|
|pagenum |1.0 | 0| 0| 0|
|PairedData |1.0.1 | 0| 0| 4|
|paleofire |1.1.9 | 0| 0| 0|
|palettetown |0.1.1 | 0| 0| 0|
|pAnalysis |2.0 | 0| 0| 0|
|pander |0.6.0 | 0| 1| 1|
|ParallelTree |0.1.1 | 0| 0| 0|
|ParamHelpers |1.9 | 1| 0| 0|
|partialAR |1.0.5 | 0| 0| 1|
|PASenseWear |1.0 | 0| 0| 0|
|PASWR2 |1.0.2 | 0| 0| 0|
|patPRO |1.1.0 | 0| 0| 1|
|pauwels2014 |1.0 | 0| 0| 2|
|PAWL |0.5 | 0| 0| 4|
|PBImisc |1.0 | 0| 0| 0|
|pcadapt |3.0.3 | 0| 0| 1|
|pcaPA |2.0.2 | 1| 0| 0|
|pcrcoal |1.2.0 | 0| 0| 0|
|pcrsim |1.0.1 | 1| 0| 0|
|PDQutils |0.1.5 | 0| 0| 0|
|PedCNV |0.1 | 0| 0| 3|
|pems.utils |0.2.17.8 | 0| 0| 0|
|peptider |0.2.2 | 0| 0| 0|
|pequod |0.0-5 | 0| 0| 0|
|performanceEstimation |1.1.0 | 0| 0| 0|
|permubiome |1.1 | 0| 0| 0|
|perry |0.2.0 | 0| 0| 1|
|perspectev |1.1 | 0| 0| 0|
|PGRdup |0.2.2.1 | 0| 1| 2|
|PhaseType |0.1.3 | 0| 0| 3|
|photobiologyInOut |0.4.12 | 0| 1| 0|
|photobiologyLamps |0.4.1 | 0| 1| 0|
|photobiologyLEDs |0.4.2 | 0| 1| 0|
|photobiologyPlants |0.4.0 | 0| 1| 0|
|Phxnlme |1.0.0 | 0| 0| 0|
|phylopath |0.2.0 | 0| 0| 0|
|phylosim |3.0.2 | 0| 0| 0|
|physiology |0.2.2 | 0| 0| 0|
|pid |0.36 | 0| 0| 0|
|pinbasic |0.1.0 | 0| 0| 0|
|pipe.design |0.4 | 0| 0| 0|
|pitchRx |1.8.2 | 0| 0| 1|
|PKgraph |1.7 | 1| 0| 0|
|PKreport |1.5 | 0| 0| 1|
|planar |1.6 | 0| 0| 0|
|PlasmaMutationDetector |1.5.2 | 1| 0| 0|
|platetools |0.0.2 | 0| 0| 0|
|playwith |0.9-54 | 1| 0| 1|
|plotluck |1.0.0 | 1| 1| 0|
|plotly |4.5.2 | 2| 0| 0|
|plotMElm |0.1.4 | 0| 0| 0|
|PlotPrjNetworks |1.0.0 | 0| 0| 0|
|plotROC |2.0.1 | 0| 0| 0|
|plspm |0.4.7 | 0| 0| 1|
|pmc |1.0.2 | 0| 0| 0|
|pogit |1.1.0 | 0| 0| 0|
|pointRes |1.1.2 | 0| 0| 0|
|pollstR |1.4.0 | 0| 0| 0|
|pomp |1.9 | 0| 0| 0|
|PopED |0.3.1 | 0| 0| 0|
|popEpi |0.4.0 | 0| 0| 0|
|PopGenReport |2.2.2 | 0| 0| 0|
|popgraph |1.4 | 0| 0| 2|
|poppr |2.2.1 | 0| 0| 0|
|popReconstruct |1.0-4 | 0| 0| 1|
|PortfolioEffectHFT |1.7 | 1| 0| 0|
|powerbydesign |1.0.3 | 0| 0| 0|
|PPtreeViz |1.3.0 | 0| 0| 0|
|prcbench |0.5.2 | 2| 1| 0|
|precintcon |2.3.0 | 0| 0| 0|
|precrec |0.5.2 | 0| 0| 0|
|predictionInterval |1.0.0 | 0| 0| 0|
|predictmeans |0.99 | 0| 0| 1|
|PredictTestbench |1.1.1 | 0| 1| 0|
|PReMiuM |3.1.3 | 0| 0| 0|
|preprocomb |0.3.0 | 0| 0| 0|
|preprosim |0.2.0 | 0| 0| 0|
|preproviz |0.2.0 | 0| 0| 0|
|preText |0.4.4 | 0| 0| 1|
|prevR |3.3 | 0| 0| 1|
|pRF |1.2 | 1| 0| 0|
|primerTree |1.0.3 | 0| 0| 0|
|prism |0.0.7 | 0| 0| 0|
|PRISMA |0.2-5 | 0| 0| 1|
|productplots |0.1.1 | 0| 0| 0|
|profileR |0.3-3 | 0| 0| 0|
|profr |0.3.1 | 0| 0| 2|
|profvis |0.3.2 | 0| 0| 0|
|ProgGUIinR |0.0-4 | 0| 0| 3|
|ProjectTemplate |0.7 | 0| 0| 2|
|proportion |1.2.3 | 0| 1| 1|
|propr |2.0.4 | 0| 0| 0|
|proteomics |0.2 | 0| 0| 1|
|PRROC |1.1 | 0| 0| 1|
|PSAboot |1.1.4 | 0| 0| 0|
|PSCBS |0.61.0 | 1| 0| 0|
|pscore |0.1-2 | 0| 0| 1|
|psd |1.0-1 | 0| 0| 1|
|pseval |1.3.0 | 0| 0| 1|
|PTXQC |0.80.14 | 0| 0| 1|
|pwr |1.2-0 | 0| 0| 0|
|pxweb |0.6.3 | 0| 0| 0|
|QCAtools |0.2.2 | 0| 0| 0|
|QCSimulator |0.0.1 | 0| 0| 0|
|qdap |2.2.5 | 1| 0| 0|
|qgraph |1.4.0 | 0| 0| 0|
|qicharts |0.5.1 | 0| 0| 0|
|quadrupen |0.2-4 | 0| 0| 1|
|QualInt |1.0.0 | 0| 0| 1|
|qualvar |0.1.0 | 0| 0| 0|
|quanteda |0.9.8.5 | 1| 0| 0|
|QuantumClone |0.16.8.19 | 0| 0| 0|
|quickpsy |0.1.4 | 1| 0| 0|
|quickReg |1.0.0 | 0| 0| 1|
|qwraps2 |0.2.2 | 0| 0| 0|
|R2admb |0.7.13 | 0| 0| 1|
|r2glmm |0.1.0 | 0| 0| 0|
|R6 |2.2.0 | 0| 0| 0|
|radiant.basics |0.6.0 | 0| 0| 0|
|radiant.data |0.6.0 | 0| 0| 0|
|radiant.model |0.6.0 | 1| 0| 0|
|radiant.multivariate |0.6.0 | 0| 0| 0|
|rags2ridges |2.1.1 | 0| 0| 1|
|ragtop |0.5 | 0| 0| 0|
|raincpc |0.4 | 0| 0| 1|
|rAltmetric |0.6 | 0| 0| 1|
|RAM |1.2.1.3 | 0| 0| 2|
|randomizeR |1.3 | 0| 0| 0|
|randomUniformForest |1.1.5 | 0| 0| 1|
|rangeMapper |0.3-0 | 0| 0| 0|
|rangemodelR |1.0.1 | 0| 0| 0|
|raptr |0.0.1 | 1| 0| 0|
|rasterVis |0.40 | 0| 0| 0|
|rattle |4.1.0 | 0| 0| 3|
|raw |0.1.2 | 0| 0| 0|
|rbefdata |0.3.5 | 0| 0| 1|
|rbison |0.5.0 | 0| 0| 0|
|rbokeh |0.5.0 | 0| 0| 0|
|rchess |0.1 | 0| 0| 0|
|rclinicaltrials |1.4.1 | 0| 0| 1|
|RcmdrPlugin.KMggplot2 |0.2-3 | 0| 0| 0|
|RcmdrPlugin.MA |0.0-2 | 0| 0| 0|
|RCMIP5 |1.2.0 | 0| 0| 0|
|rddtools |0.4.0 | 0| 0| 0|
|RDML |0.9-1 | 0| 0| 0|
|rdpla |0.1.0 | 0| 0| 0|
|RDS |0.7-7 | 0| 0| 0|
|reda |0.2.1 | 0| 0| 0|
|refund |0.1-16 | 0| 0| 0|
|refund.shiny |0.2.0 | 0| 0| 0|
|rem |1.1.2 | 0| 0| 0|
|repijson |0.1.0 | 0| 0| 0|
|replicationInterval |2.0.1 | 0| 0| 0|
|ReporteRs |0.8.7 | 1| 0| 0|
|reproducer |0.1.6 | 0| 0| 0|
|reval |2.0.0 | 0| 0| 0|
|rex |1.1.1 | 0| 0| 0|
|rfigshare |0.3.7 | 0| 0| 1|
|RFinfer |0.2.0 | 0| 0| 0|
|rfisheries |0.2 | 0| 0| 0|
|RFmarkerDetector |1.0.1 | 0| 0| 0|
|rfordummies |0.1.2 | 1| 0| 1|
|rfPermute |2.1.5 | 0| 0| 0|
|rgbif |0.9.5 | 0| 0| 0|
|RGraphics |2.0-14 | 0| 0| 3|
|RImagePalette |0.1.1 | 0| 0| 0|
|rinat |0.1.4 | 0| 0| 1|
|rivr |1.2 | 0| 0| 0|
|RJafroc |0.1.1 | 1| 0| 0|
|RmarineHeatWaves |0.13.1 | 0| 0| 0|
|rmcfs |1.1.2 | 1| 0| 0|
|rmetasim |3.0.5 | 0| 0| 0|
|rms |5.0-0 | 1| 0| 0|
|RndTexExams |1.4 | 0| 0| 0|
|rnoaa |0.6.5 | 0| 0| 0|
|rnpn |0.1.0 | 0| 0| 0|
|rnrfa |1.2 | 0| 0| 0|
|robCompositions |2.0.2 | 0| 1| 1|
|robmed |0.1.1 | 0| 0| 0|
|robustbase |0.92-6 | 0| 0| 1|
|RobustEM |1.0 | 0| 0| 1|
|robustHD |0.5.1 | 0| 0| 0|
|robustlmm |1.8 | 0| 0| 0|
|rollply |0.5.0 | 0| 0| 0|
|ropenaq |0.1.3 | 0| 0| 0|
|rorutadis |0.4.1 | 0| 0| 0|
|rotations |1.5 | 0| 0| 0|
|rpdo |0.2.0 | 0| 0| 0|
|rpf |0.53 | 0| 0| 0|
|rplexos |1.1.8 | 0| 0| 0|
|rplos |0.6.0 | 0| 0| 0|
|RPPanalyzer |1.4.3 | 1| 0| 0|
|rPref |1.1 | 0| 0| 2|
|rprev |0.2.2 | 0| 0| 0|
|rpsftm |1.0.1 | 0| 0| 0|
|rrepast |0.5.0 | 1| 0| 0|
|RSA |0.9.10 | 0| 1| 0|
|rSARP |1.0.0 | 0| 0| 0|
|RSDA |1.3 | 0| 0| 0|
|rSPACE |1.2.0 | 0| 0| 0|
|RSSL |0.6.1 | 0| 0| 0|
|rstan |2.12.1 | 1| 0| 0|
|rstanarm |2.12.1 | 1| 0| 1|
|RStoolbox |0.1.6 | 0| 0| 0|
|rsvd |0.6 | 0| 0| 0|
|rsvg |1.0 | 1| 0| 0|
|rtematres |0.2 | 0| 0| 0|
|rtf |0.4-11 | 0| 0| 2|
|rtide |0.0.2 | 0| 0| 0|
|rtimes |0.3.0 | 0| 0| 0|
|rtip |1.0.0 | 0| 0| 0|
|RtutoR |0.3 | 0| 0| 0|
|rvertnet |0.5.0 | 0| 0| 0|
|rWBclimate |0.1.3 | 0| 0| 1|
|rwirelesscom |1.4.3 | 0| 0| 0|
|rwty |1.0.1 | 0| 0| 0|
|ryouready |0.4 | 0| 0| 0|
|Rz |0.9-1 | 0| 1| 2|
|sadists |0.2.2 | 0| 0| 0|
|saeRobust |0.1.0 | 0| 0| 0|
|saeSim |0.8.0 | 0| 0| 0|
|SamplerCompare |1.2.7 | 0| 0| 0|
|sand |1.0.2 | 0| 0| 2|
|scanstatistics |0.1.0 | 0| 0| 0|
|scdhlm |0.3 | 0| 0| 0|
|SCGLR |2.0.3 | 0| 0| 0|
|SciencesPo |1.4.1 | 0| 0| 0|
|scmamp |0.2.55 | 1| 0| 0|
|SDaA |0.1-3 | 0| 0| 1|
|sdcMicro |4.6.1 | 0| 0| 0|
|SDEFSR |0.7.1.0 | 0| 0| 0|
|sdmvspecies |0.3.2 | 0| 0| 0|
|season |0.3-5 | 0| 0| 1|
|SEERaBomb |2016.1 | 1| 0| 0|
|seewave |2.0.5 | 1| 0| 0|
|selfea |1.0.1 | 0| 0| 1|
|SemiParBIVProbit |3.8 | 0| 0| 0|
|sensiPhy |0.5.0 | 0| 0| 0|
|sensitivity |1.12.2 | 0| 0| 0|
|SensMixed |2.0-10 | 0| 0| 0|
|SensusR |2.0.0 | 1| 0| 0|
|sentimentr |0.2.3 | 0| 0| 0|
|SeqFeatR |0.2.4 | 1| 0| 0|
|sgd |1.1 | 0| 0| 0|
|sglr |0.7 | 0| 0| 2|
|shazam |0.1.4 | 0| 0| 0|
|SHELF |1.2.1 | 0| 0| 0|
|shiny |0.14.2 | 0| 0| 1|
|ShinyItemAnalysis |0.2.0 | 0| 0| 0|
|shinystan |2.2.1 | 0| 0| 0|
|sidier |3.0.1 | 0| 0| 1|
|sigmoid |0.2.0 | 0| 0| 0|
|Sim.DiffProc |3.4 | 0| 0| 1|
|simcausal |0.5.1 | 0| 1| 0|
|SimDesign |1.4 | 0| 0| 1|
|simmer |3.5.0 | 0| 1| 0|
|simmr |0.3 | 1| 0| 0|
|simPH |1.3.9 | 0| 0| 0|
|simstudy |0.1.1 | 0| 0| 0|
|simTool |1.0.3 | 0| 0| 2|
|simulator |0.2.0 | 0| 0| 0|
|sitmo |1.0.0 | 0| 0| 0|
|SixSigma |0.9-3 | 0| 0| 0|
|sjPlot |2.1.1 | 1| 0| 0|
|sjstats |0.6.0 | 0| 0| 0|
|slackr |1.4.2 | 0| 0| 0|
|slim |0.1.0 | 0| 1| 1|
|SmarterPoland |1.7 | 0| 0| 1|
|SMFI5 |1.0 | 0| 0| 2|
|smoof |1.4 | 0| 0| 0|
|snht |1.0.4 | 0| 0| 0|
|snpEnrichment |1.7.0 | 1| 0| 0|
|soc.ca |0.7.3 | 1| 0| 0|
|Sofi |0.16.4.8 | 0| 0| 0|
|solarius |0.3.0.2 | 0| 0| 0|
|sorvi |0.7.26 | 0| 0| 1|
|sotkanet |0.9.21 | 0| 0| 0|
|sourceR |0.2.0 | 0| 0| 0|
|SpaDES |1.3.1 | 0| 0| 1|
|sparkTable |1.2.0 | 1| 0| 1|
|sparsediscrim |0.2.3 | 0| 0| 0|
|SparseFactorAnalysis |1.0 | 0| 0| 0|
|sparsereg |1.2 | 0| 0| 0|
|sparsevar |0.0.9 | 0| 0| 0|
|spatialClust |1.1.1 | 0| 0| 0|
|spbabel |0.4.5 | 0| 0| 0|
|spcosa |0.3-6 | 1| 0| 0|
|specmine |1.0 | 1| 0| 0|
|spef |1.0-1 | 0| 0| 0|
|spikeSlabGAM |1.1-11 | 0| 0| 0|
|SPOT |1.1.0 | 0| 0| 0|
|sprm |1.2.2 | 0| 0| 0|
|squid |0.1.1 | 0| 0| 0|
|srvyr |0.2.0 | 0| 0| 0|
|ss3sim |0.9.2 | 0| 0| 0|
|starma |1.3 | 0| 0| 0|
|starmie |0.1.2 | 1| 0| 0|
|statar |0.6.2 | 0| 0| 0|
|statcheck |1.2.2 | 0| 0| 0|
|statebins |1.2.2 | 0| 0| 0|
|StatRank |0.0.6 | 0| 0| 0|
|strataG |1.0.5 | 0| 0| 0|
|StroupGLMM |0.1.0 | 1| 0| 0|
|structSSI |1.1.1 | 1| 0| 0|
|strvalidator |1.8.0 | 1| 0| 0|
|subspaceMOA |0.5.1 | 1| 0| 0|
|SuperLearner |2.0-19 | 0| 0| 1|
|surveillance |1.12.1 | 0| 1| 2|
|survminer |0.2.2 | 1| 2| 1|
|survMisc |0.5.3 | 1| 0| 0|
|SurvRank |0.1 | 0| 0| 0|
|sValues |0.1.4 | 0| 0| 0|
|svdvis |0.1 | 0| 0| 0|
|swfscMisc |1.2 | 0| 0| 0|
|SWMPr |2.1.7 | 0| 0| 0|
|synthpop |1.3-0 | 0| 0| 0|
|tableone |0.7.3 | 0| 0| 0|
|tabplot |1.3 | 1| 1| 0|
|tadaatoolbox |0.10.0 | 0| 0| 0|
|taRifx |1.0.6 | 0| 0| 4|
|TcGSA |0.10.1 | 1| 0| 0|
|tcgsaseq |1.0.1 | 1| 0| 2|
|tcR |2.2.1.11 | 0| 0| 1|
|tdr |0.11 | 0| 0| 1|
|TELP |1.0 | 1| 0| 0|
|texmexseq |0.3 | 0| 0| 0|
|Thermimage |2.2.3 | 0| 0| 0|
|thief |0.2 | 0| 0| 0|
|tidyjson |0.2.1 | 0| 0| 1|
|tidytext |0.1.2 | 0| 0| 0|
|tidyverse |1.0.0 | 0| 0| 0|
|tigerstats |0.2.7 | 0| 0| 0|
|tigger |0.2.8 | 0| 0| 0|
|tigris |0.3.3 | 0| 0| 0|
|tikzDevice |0.10-1 | 0| 0| 0|
|timeit |0.2.1 | 0| 0| 2|
|timeline |0.9 | 0| 0| 2|
|timelineS |0.1.1 | 0| 0| 0|
|TimeProjection |0.2.0 | 0| 0| 2|
|TippingPoint |1.1.0 | 0| 0| 0|
|tmap |1.6-1 | 0| 0| 0|
|Tmisc |0.1.10 | 0| 0| 0|
|toaster |0.5.4 | 1| 0| 0|
|tourr |0.5.4 | 0| 0| 2|
|tourrGui |0.4 | 0| 0| 4|
|toxboot |0.1.1 | 0| 0| 1|
|trackeR |0.0.4 | 0| 1| 0|
|trapezoid |2.0-0 | 0| 0| 1|
|TreatmentSelection |1.2.0 | 0| 0| 0|
|treeclim |2.0.0 | 0| 0| 0|
|treecm |1.2.2 | 0| 0| 0|
|treemap |2.4-1 | 0| 0| 0|
|treescape |1.10.17 | 0| 0| 0|
|trelliscope |0.9.7 | 0| 0| 1|
|TriMatch |0.9.7 | 0| 0| 0|
|TripleR |1.5.3 | 0| 0| 0|
|TSMining |1.0 | 0| 0| 1|
|tspmeta |1.2 | 0| 0| 0|
|TSS.RESTREND |0.1.02 | 0| 0| 1|
|tufterhandout |1.2.1 | 0| 0| 1|
|tvm |0.3.0 | 0| 0| 0|
|tweet2r |1.0 | 0| 0| 0|
|ubeR |0.1.3 | 0| 0| 0|
|UBL |0.0.5 | 1| 0| 0|
|ukgasapi |0.13 | 0| 0| 1|
|unvotes |0.1.0 | 0| 0| 0|
|UpSetR |1.3.0 | 0| 1| 1|
|useful |1.2.1 | 0| 0| 0|
|userfriendlyscience |0.4-1 | 1| 0| 2|
|UsingR |2.0-5 | 1| 0| 0|
|varian |0.2.2 | 0| 0| 0|
|vcdExtra |0.7-0 | 0| 0| 1|
|vcfR |1.2.0 | 0| 0| 0|
|VDAP |2.0.0 | 0| 0| 0|
|vdg |1.2.0 | 0| 0| 0|
|vdmR |0.2.2 | 2| 1| 0|
|VetResearchLMM |0.1.0 | 0| 0| 0|
|vipor |0.4.4 | 0| 1| 0|
|viridis |0.3.4 | 0| 0| 0|
|viridisLite |0.1.3 | 0| 0| 0|
|visreg |2.3-0 | 0| 0| 0|
|vmsbase |2.1.3 | 1| 0| 0|
|voxel |1.2.1 | 0| 0| 0|
|vrcp |0.1.1 | 0| 0| 0|
|VRPM |1.1 | 0| 0| 0|
|VSE |0.99 | 0| 0| 0|
|vtreat |0.5.28 | 0| 0| 0|
|VWPre |0.9.0 | 0| 0| 0|
|waffle |0.6.0 | 0| 0| 0|
|wakefield |0.3.0 | 0| 0| 0|
|walkr |0.3.3 | 0| 0| 0|
|warbleR |1.1.2 | 0| 0| 1|
|waterfalls |0.1.0 | 0| 0| 0|
|Wats |0.10.3 | 0| 0| 0|
|wbstats |0.1 | 0| 0| 0|
|wesanderson |0.3.2 | 0| 0| 2|
|WHO |0.2 | 0| 0| 0|
|wikipediatrend |1.1.10 | 0| 0| 1|
|wordbankr |0.2.0 | 0| 0| 0|
|wppExplorer |2.0-0 | 0| 0| 0|
|wrswoR.benchmark |0.1-1 | 0| 0| 0|
|wrswoR |1.0-1 | 0| 0| 0|
|x.ent |1.1.2 | 1| 0| 0|
|xgboost |0.4-4 | 0| 0| 0|
|XGR |1.0.4 | 1| 0| 0|
|xkcd |0.0.5 | 0| 0| 0|
|XLConnect |0.2-12 | 1| 0| 0|
|xtractomatic |3.1.1 | 0| 1| 0|
|xxIRT |1.1.0 | 0| 0| 0|
|yorkr |0.0.5 | 0| 0| 0|
|zebu |0.1.0 | 0| 0| 0|
|zoo |1.7-13 | 0| 0| 0|
|zooaRch |1.2 | 0| 0| 0|
abctools (1.0.4)
Maintainer: Matt Nunes m.nunes@lancaster.ac.uk
Bug reports: https://github.com/dennisprangle/abctools/issues
0 errors | 0 warnings | 0 notes
abd (0.2-8)
Maintainer: Kevin M. Middleton middletonk@missouri.edu
0 errors | 0 warnings | 0 notes
ABHgenotypeR (1.0.1)
Maintainer: Stefan Reuscher reuscher.stefan@gmail.com
Bug reports: http://github.com/StefanReuscher/ABHgenotypeR/issues
0 errors | 0 warnings | 0 notes
ACDm (1.0.4)
Maintainer: Markus Belfrage markus.belfrage@gmail.com
0 errors | 0 warnings | 0 notes
ACSNMineR (0.16.8.25)
Maintainer: Paul Deveau paul.deveau@curie.fr
0 errors | 0 warnings | 0 notes
adapr (1.0)
Maintainer: Jonathan Gelfond gelfondjal@uthscsa.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘pkgKitten’
AdaptGauss (1.2.4)
Maintainer: Michael Thrun mthrun@mathematik.uni-marburg.de
0 errors | 0 warnings | 0 notes
adegenet (2.0.1)
Maintainer: Thibaut Jombart thibautjombart@gmail.com
0 errors | 0 warnings | 0 notes
admixturegraph (1.0.1)
Maintainer: Thomas Mailund mailund@birc.au.dk
Bug reports: https://github.com/mailund/admixture_graph/issues
0 errors | 0 warnings | 0 notes
advclust (0.4)
Maintainer: Achmad Fauzi Bagus F fauzi.pandya@gmail.com
0 errors | 0 warnings | 0 notes
AFM (1.2.2)
Maintainer: Mathieu Beauvais beauvais.escp@gmail.com
0 errors | 0 warnings | 0 notes
aimPlot (1.0.0)
Maintainer: Yusman Kamaleri ybkamaleri@gmail.com
0 errors | 0 warnings | 0 notes
alakazam (0.2.5)
Maintainer: Jason Vander Heiden jason.vanderheiden@yale.edu
Bug reports: https://bitbucket.org/kleinstein/alakazam/issues
0 errors | 0 warnings | 0 notes
AlignStat (1.3.1)
Maintainer: Thomas Shafee thomas.shafee@gmail.com
Bug reports: https://github.com/TS404/AlignStat/issues
0 errors | 0 warnings | 0 notes
alm (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: http://www.github.com/ropensci/alm/issues
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
alm_events : parse_events: no visible global function definition for
‘setNames’
alm_ids : getalm: no visible global function definition for ‘is’
alm_plot: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
is na.omit setNames
Consider adding
importFrom("methods", "is")
importFrom("stats", "na.omit", "setNames")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking files in ‘vignettes’ ... NOTE
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
alphahull (2.1)
Maintainer: Beatriz Pateiro-Lopez beatriz.pateiro@usc.es
0 errors | 0 warnings | 0 notes
ameco (0.2.3)
Maintainer: Eric Persson expersso5@gmail.com
Bug reports: http://github.com/expersso/ameco/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 15.3Mb
sub-directories of 1Mb or more:
data 15.2Mb
AmpliconDuo (1.1)
Maintainer: Anja Lange anja.lange@uni-due.de
0 errors | 0 warnings | 0 notes
AmyloGram (1.0)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com
Bug reports: https://github.com/michbur/AmyloGram/issues
0 errors | 0 warnings | 0 notes
ANOM (0.4.3)
Maintainer: Philip Pallmann p.pallmann@lancaster.ac.uk
0 errors | 0 warnings | 0 notes
antitrust (0.95.1)
Maintainer: Charles Taragin charles.taragin@usdoj.gov
0 errors | 0 warnings | 0 notes
aop (1.0.0)
Maintainer: Lyle D. Burgoon Lyle.D.Burgoon@usace.army.mil
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘Rgraphviz’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
aoristic (0.6)
Maintainer: George Kikuchi gkikuchi@csufresno.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
aoristic.all.graph: no visible global function definition for
‘aggregate’
aoristic.density: no visible global function definition for ‘as’
aoristic.density: no visible global function definition for
‘contourLines’
aoristic.density: no visible global function definition for ‘quantile’
aoristic.density: no visible global function definition for ‘aggregate’
aoristic.density: no visible global function definition for ‘slot’
aoristic.density : <anonymous>: no visible global function definition
... 27 lines ...
aggregate as browseURL colorRampPalette contourLines dev.off image
par png quantile slot
Consider adding
importFrom("grDevices", "colorRampPalette", "contourLines", "dev.off",
"png")
importFrom("graphics", "image", "par")
importFrom("methods", "as", "slot")
importFrom("stats", "aggregate", "quantile")
importFrom("utils", "browseURL")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
apsimr (1.2)
Maintainer: Bryan Stanfill bstanfill2003@gmail.com
Bug reports: https://github.com/stanfill/apsimr/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘APSIMBatch’
archetypes (2.2-0)
Maintainer: Manuel J. A. Eugster manuel@mjae.net
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘MASS’ ‘TSP’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
archetypes: no visible binding for global variable ‘history’
archmap: no visible global function definition for ‘chull’
archmap: no visible global function definition for ‘plot’
archmap: no visible global function definition for ‘points’
archmap: no visible global function definition for ‘polygon’
archmap: no visible global function definition for ‘text’
atypes_projection: no visible global function definition for ‘cmdscale’
atypes_projection: no visible global function definition for ‘dist’
barplot.archetypes : .below.default: no visible global function
... 80 lines ...
head history layout lines matlines matplot median mtext optim par
plot points polygon rgb rnorm sd solve_TSP symbols tail text
Consider adding
importFrom("grDevices", "chull", "gray", "rgb")
importFrom("graphics", "abline", "arrows", "axis", "box", "layout",
"lines", "matlines", "matplot", "mtext", "par", "plot",
"points", "polygon", "symbols", "text")
importFrom("stats", "cmdscale", "dist", "ecdf", "median", "optim",
"rnorm", "sd")
importFrom("utils", "combn", "head", "history", "tail")
to your NAMESPACE file.
archivist (2.1)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com
Bug reports: https://github.com/pbiecek/archivist/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘archivist-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aread
> ### Title: Read Artifacts Given as md5hashes from the Repository
> ### Aliases: aread
>
> ### ** Examples
>
> # read the object from local directory
> setLocalRepo(system.file("graphGallery", package = "archivist"))
> pl <- aread("f05f0ed0662fe01850ec1b928830ef32")
> # plot it
> pl
Error: ScalesList was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘archivist.github’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘archivist.github’
ARPobservation (1.1)
Maintainer: James E. Pustejovsky jepusto@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
E_logitnorm : <anonymous>: no visible global function definition for
‘integrate’
F_const : <anonymous>: no visible global function definition for
‘runif’
F_exp : <anonymous>: no visible global function definition for ‘rexp’
F_gam : <anonymous>: no visible global function definition for ‘rgamma’
F_gam_mix : <anonymous>: no visible global function definition for
‘rbinom’
F_gam_mix : <anonymous>: no visible global function definition for
... 41 lines ...
‘uniroot’
rweibull_eq: no visible global function definition for ‘runif’
smooth_cov: no visible global function definition for ‘dist’
Undefined global functions or variables:
aggregate dist integrate nobs pgamma qnorm quantile rbinom rexp
rgamma rnorm runif rweibull uniroot var
Consider adding
importFrom("stats", "aggregate", "dist", "integrate", "nobs", "pgamma",
"qnorm", "quantile", "rbinom", "rexp", "rgamma", "rnorm",
"runif", "rweibull", "uniroot", "var")
to your NAMESPACE file.
ARTool (0.10.4)
Maintainer: Matthew Kay mjskay@umich.edu
Bug reports: https://github.com/mjskay/ARTool/issues/new
0 errors | 0 warnings | 0 notes
asremlPlus (2.0-12)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘asreml’
asVPC (1.0.2)
Maintainer: Eun-Kyung Lee lee.eunk@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
VPC.graph : findQuantile: no visible global function definition for
‘quantile’
VPC.graph : findQuantileCI : <anonymous>: no visible global function
definition for ‘quantile’
asVPC.binW: no visible global function definition for ‘median’
asVPC.binW : <anonymous>: no visible global function definition for
‘quantile’
asVPC.binW: no visible global function definition for ‘quantile’
asVPC.distanceW: no visible global function definition for ‘median’
asVPC.distanceW : <anonymous>: no visible global function definition
for ‘quantile’
asVPC.distanceW: no visible global function definition for ‘quantile’
makeCOVbin: no visible global function definition for ‘quantile’
makeCOVbin: no visible global function definition for ‘median’
read_Simdata: no visible global function definition for ‘read.table’
Undefined global functions or variables:
median quantile read.table
Consider adding
importFrom("stats", "median", "quantile")
importFrom("utils", "read.table")
to your NAMESPACE file.
automap (1.0-14)
Maintainer: Paul Hiemstra paul@numbertheory.nl
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘gpclib’ ‘maptools’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
autoKrige: no visible global function definition for ‘as.formula’
autofitVariogram: no visible global function definition for
‘modifyList’
autofitVariogram: no visible global function definition for ‘is’
autofitVariogram: no visible global function definition for ‘median’
autokrige.vgm.panel: no visible global function definition for ‘grey’
compare.cv: no visible global function definition for ‘quantile’
create_new_data: no visible global function definition for ‘chull’
cv.compare.ggplot: no visible global function definition for ‘ggplot’
... 29 lines ...
geom_path geom_point ggplot grey is median modifyList qnorm quantile
scale_color_gradient2 scale_size_continuous scale_x_continuous
scale_y_continuous sd
Consider adding
importFrom("grDevices", "chull", "grey")
importFrom("methods", "is")
importFrom("stats", "IQR", "as.formula", "cor", "median", "qnorm",
"quantile", "sd")
importFrom("utils", "modifyList")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
BACA (1.3)
Maintainer: Vittorio Fortino vittorio.fortino@ttl.fi
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RDAVIDWebService’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
BacArena (1.5.1)
Maintainer: Johannes Zimmermann j.zimmermann@iem.uni-kiel.de
Bug reports: https://github.com/euba/BacArena/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sybilSBML’
checking R code for possible problems ... NOTE
plotCurves2,Eval: no visible global function definition for ‘matplot’
plotTotFlux,Eval: no visible global function definition for ‘matplot’
statPheno,Eval: no visible global function definition for ‘matplot’
statSpec,Eval: no visible global function definition for ‘matplot’
Undefined global functions or variables:
matplot
Consider adding
importFrom("graphics", "matplot")
to your NAMESPACE file.
BACCT (1.0)
Maintainer: Hongtao Zhang hongtao.zhang@abbvie.com
1 error | 0 warnings | 0 notes
checking whether package ‘BACCT’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/BACCT.Rcheck/00install.out’ for details.
backShift (0.1.3)
Maintainer: Christina Heinze heinze@stat.math.ethz.ch
Bug reports: https://github.com/christinaheinze/backShift/issues
1 error | 0 warnings | 0 notes
checking whether package ‘backShift’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/backShift.Rcheck/00install.out’ for details.
bamdit (3.0.0)
Maintainer: Pablo Emilio Verde pabloemilio.verde@hhu.de
1 error | 0 warnings | 0 notes
checking whether package ‘bamdit’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/bamdit.Rcheck/00install.out’ for details.
bayesAB (0.7.0)
Maintainer: Frank Portman frank1214@gmail.com
Bug reports: https://github.com/FrankPortman/bayesAB/issues
0 errors | 0 warnings | 0 notes
bayesbio (1.0.0)
Maintainer: Andrew McKenzie amckenz@gmail.com
0 errors | 0 warnings | 0 notes
BBEST (0.1-6)
Maintainer: Anton Gagin av.gagin@gmail.com
0 errors | 0 warnings | 0 notes
bbmle (1.0.18)
Maintainer: Ben Bolker bolker@mcmaster.ca
0 errors | 0 warnings | 0 notes
BCEA (2.2-3)
Maintainer: Gianluca Baio gianluca@stats.ucl.ac.uk
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘BCEA-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: evppi
> ### Title: Expected Value of Perfect Partial Information (EVPPI) for
> ### selected parameters
> ### Aliases: evppi evppi.default
> ### Keywords: Health economic evaluation Expected value of partial
... 12 lines ...
> #
> # Runs the health economic evaluation using BCEA
> m <- bcea(e,c,ref=2,interventions=treats)
> #
> # Computes the EVPPI for a bunch of parameters
> inp <- CreateInputs(vaccine)
Error in CreateInputs(vaccine) :
You need to install the package 'R2jags'. Please run in your R terminal:
install.packages('R2jags')
Execution halted
** found \donttest examples: check also with --run-donttest
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘INLA’
BCellMA (0.1)
Maintainer: Olena Ohlei olena.ohlei@student.uni-luebeck.de
0 errors | 0 warnings | 0 notes
Bclim (3.1.0)
Maintainer: Andrew Parnell Andrew.Parnell@ucd.ie
0 errors | 0 warnings | 0 notes
bcp (4.0.0)
Maintainer: John W. Emerson john.emerson@yale.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘DNAcopy’
bcrm (0.4.6)
Maintainer: Michael Sweeting mjs212@medschl.cam.ac.uk
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘bcrm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bcrm
> ### Title: Bayesian Continual Reassessment Method for Phase I
> ### Dose-Escalation Trials
> ### Aliases: bcrm
>
... 133 lines ...
> ## Using rjags (requires JAGS to be installed)
> TwoPLogistic.mean.bcrm<-bcrm(stop=list(nmax=18),data=data,sdose=sdose
+ ,dose=dose,ff="logit2",prior.alpha=list(4,mu,Sigma),target.tox=target.tox
+ ,constrain=FALSE,pointest="mean",method="rjags")
Error: .onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/hadley/R-revdep/rjags/libs/rjags.so':
dlopen(/Users/hadley/R-revdep/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: /Users/hadley/R-revdep/rjags/libs/rjags.so
Reason: image not found
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
bde (1.0.1)
Maintainer: Guzman Santafe guzman.santafe@unavarra.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
mise: no visible global function definition for ‘integrate’
density,BrVitale : density.vitale : <anonymous>: no visible global
function definition for ‘dbeta’
density,Chen99Kernel : <anonymous>: no visible global function
definition for ‘dbeta’
density,HirukawaJLNKernel : <anonymous>: no visible global function
definition for ‘dbeta’
density,MicroBetaChen99Kernel : <anonymous>: no visible global function
definition for ‘dbeta’
... 19 lines ...
‘dbeta’
setNormalizationConstants,MicroBetaChen99Kernel : <anonymous>: no
visible global function definition for ‘integrate’
show,BoundedDensity: no visible global function definition for ‘str’
show,KernelDensity: no visible global function definition for ‘str’
Undefined global functions or variables:
dbeta integrate runif str
Consider adding
importFrom("stats", "dbeta", "integrate", "runif")
importFrom("utils", "str")
to your NAMESPACE file.
bdscale (2.0.0)
Maintainer: Dave Mills dave.a.mills@gmail.com
0 errors | 0 warnings | 0 notes
bdvis (0.2.6)
Maintainer: Vijay Barve vijay.barve@gmail.com
0 errors | 0 warnings | 0 notes
benchmark (0.3-6)
Maintainer: Manuel J. A. Eugster manuel@mjae.net
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Rgraphviz’
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘multcomp’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
as.dataset: no visible global function definition for ‘terms’
as.dataset: no visible global function definition for ‘as.formula’
as.psychobench: no visible global function definition for ‘is’
as.psychobench: no visible global function definition for ‘reshape’
benchmark: no visible global function definition for ‘as.formula’
benchmark: no visible global function definition for ‘predict’
benchmark: no visible global function definition for ‘na.omit’
beplot0.AlgorithmPerformance : <anonymous>: no visible global function
definition for ‘legend’
... 81 lines ...
theme_text value
Consider adding
importFrom("grDevices", "col2rgb", "gray", "rgb")
importFrom("graphics", "abline", "axis", "barplot", "box", "layout",
"legend", "lines", "mtext", "par", "points", "rect",
"segments")
importFrom("methods", "is", "new")
importFrom("stats", "as.formula", "cancor", "lm", "median", "na.omit",
"predict", "reshape", "terms")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘graph’
benchmarkme (0.3.0)
Maintainer: Colin Gillespie csgillespie@gmail.com
Bug reports: https://github.com/csgillespie/benchmarkme/issues
0 errors | 0 warnings | 0 notes
benchmarkmeData (0.3.0)
Maintainer: Colin Gillespie csgillespie@gmail.com
Bug reports: https://github.com/csgillespie/benchmarkme-data/issues
0 errors | 0 warnings | 0 notes
bife (0.1)
Maintainer: Amrei Stammann amrei.stammann@hhu.de
0 errors | 0 warnings | 0 notes
binom (1.1-1)
Maintainer: Sundar Dorai-Raj sdorairaj@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘lattice’ ‘polynom’ ‘tcltk’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
binom.bayes: no visible global function definition for ‘qbeta’
binom.bayes: no visible global function definition for ‘pbeta’
binom.bayes.densityplot: no visible global function definition for
‘ggplot’
binom.bayes.densityplot: no visible global function definition for
‘aes_string’
binom.bayes.densityplot: no visible global function definition for
‘geom_polygon’
binom.bayes.densityplot: no visible global function definition for
... 167 lines ...
tkpack tkradiobutton tkscale tktoplevel tkwm.title trellis.par.get
trellis.par.set uniroot xlab xlim xyplot ylab ylim
Consider adding
importFrom("grDevices", "heat.colors")
importFrom("graphics", "abline", "axis", "box", "legend", "lines",
"plot")
importFrom("stats", "aggregate", "approx", "binomial", "dbeta",
"dbinom", "dnorm", "optim", "pbeta", "pnorm", "predict",
"qbeta", "qnorm", "rbinom", "reorder", "spline", "uniroot")
importFrom("utils", "find")
to your NAMESPACE file.
biogas (1.4.0)
Maintainer: Sasha D. Hafner saha@kbm.sdu.dk
0 errors | 0 warnings | 0 notes
biogram (1.3)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com
Bug reports: https://github.com/michbur/biogram/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: slam
Quitting from lines 15-40 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
formal argument "panel.grid.major" matched by multiple actual arguments
Execution halted
Biograph (2.0.6)
Maintainer: Frans Willekens willekens@nidi.nl
0 errors | 0 warnings | 0 notes
bioinactivation (1.1.3)
Maintainer: Alberto Garre garre.alberto@gmail.com
0 errors | 0 warnings | 0 notes
biomod2 (3.3-7)
Maintainer: Damien Georges damien.georges2@gmail.com
Bug reports: https://r-forge.r-project.org/R/?group_id=302
0 errors | 0 warnings | 0 notes
BioPET (0.2.0)
Maintainer: Jeremy Roth jhroth@uw.edu
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘BioPET-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: enrichment_analysis
> ### Title: Prognostic Enrichment with Real Data
> ### Aliases: enrichment_analysis
>
> ### ** Examples
>
> data(dcaData)
>
> ## using a single biomarker in the dataset
> analysis.single.marker <- enrichment_analysis(Cancer ~ Marker1,
+ data=dcaData,
+ reduction.under.treatment=0.3,
+ cost.screening=100,
+ cost.keeping=1000)
Warning in mean.default(response) :
argument is not numeric or logical: returning NA
Error: Unsupported use of matrix or array for column indexing
Execution halted
bioplots (0.0.1)
Maintainer: Jianqiang Sun wukong@bi.a.u-tokyo.ac.jp
0 errors | 0 warnings | 0 notes
BioStatR (2.0.0)
Maintainer: Frederic Bertrand frederic.bertrand@math.unistra.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
binom.ci : bc: no visible global function definition for ‘qf’
binom.ci : bc: no visible global function definition for ‘qnorm’
cvar: no visible global function definition for ‘sd’
eta2: no visible global function definition for ‘lm’
eta2: no visible global function definition for ‘as.formula’
gg_qqplot: no visible binding for global variable ‘qnorm’
gg_qqplot: no visible global function definition for ‘quantile’
panel.hist: no visible global function definition for ‘par’
panel.hist: no visible global function definition for ‘hist’
panel.hist: no visible global function definition for ‘rect’
plotcdf2: no visible global function definition for ‘colorRampPalette’
plotcdf2 : jet.colors: no visible global function definition for ‘gray’
plotcdf2: no visible global function definition for ‘persp’
poi.ci: no visible global function definition for ‘qchisq’
Undefined global functions or variables:
as.formula colorRampPalette gray hist lm par persp qchisq qf qnorm
quantile rect sd
Consider adding
importFrom("grDevices", "colorRampPalette", "gray")
importFrom("graphics", "hist", "par", "persp", "rect")
importFrom("stats", "as.formula", "lm", "qchisq", "qf", "qnorm",
"quantile", "sd")
to your NAMESPACE file.
BlandAltmanLeh (0.3.1)
Maintainer: Bernhard Lehnert bernhard.lehnert@uni-greifswald.de
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 171-174 (Intro.Rmd)
Error: processing vignette 'Intro.Rmd' failed with diagnostics:
Don't know how to add o to a plot
Execution halted
blkbox (1.0)
Maintainer: Boris Guennewig b.guennewig@garvan.org.au
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘bigrf’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
blockseg (0.2)
Maintainer: Julien Chiquet julien.chiquet@gmail.com
0 errors | 0 warnings | 0 notes
blscrapeR (1.0.2)
Maintainer: Kris Eberwein eberwein@knights.ucf.edu
Bug reports: https://github.com/keberwein/blscrapeR/issues
0 errors | 0 warnings | 0 notes
bmlm (1.2.1)
Maintainer: Matti Vuorre mv2521@columbia.edu
Bug reports: http://github.com/mvuorre/bmlm/issues/
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
bmmix (0.1-2)
Maintainer: Thibaut Jombart t.jombart@imperial.ac.uk
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
bmmix : LL.y: no visible global function definition for ‘dmultinom’
bmmix : LL.x : <anonymous>: no visible global function definition for
‘dmultinom’
bmmix : LPrior.alpha: no visible global function definition for ‘dexp’
bmmix : alpha.move: no visible global function definition for ‘rnorm’
bmmix : alpha.move: no visible global function definition for ‘runif’
bmmix : phi.move: no visible global function definition for ‘rnorm’
bmmix : phi.move: no visible global function definition for ‘runif’
bmmix: no visible global function definition for ‘read.table’
Undefined global functions or variables:
dexp dmultinom read.table rnorm runif
Consider adding
importFrom("stats", "dexp", "dmultinom", "rnorm", "runif")
importFrom("utils", "read.table")
to your NAMESPACE file.
bodenmiller (0.1)
Maintainer: Yann Abraham yann.abraham@gmail.com
Bug reports: https://github.com/yannabraham/bodenmiller/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.9Mb
sub-directories of 1Mb or more:
data 8.7Mb
bootnet (0.3)
Maintainer: Sacha Epskamp mail@sachaepskamp.com
0 errors | 0 warnings | 0 notes
braidReports (0.5.3)
Maintainer: Nathaniel R. Twarog nathaniel.twarog@stjude.org
0 errors | 0 warnings | 0 notes
brainGraph (0.72.0)
Maintainer: Christopher G. Watson cgwatson@bu.edu
Bug reports:
https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
1 error | 0 warnings | 0 notes
checking whether package ‘brainGraph’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/brainGraph.Rcheck/00install.out’ for details.
breakpoint (1.2)
Maintainer: Priyadarshana W.J.R.M. mjayawardana@swin.edu.au
0 errors | 0 warnings | 0 notes
bridgedist (0.1.0)
Maintainer: Bruce Swihart bruce.swihart@gmail.com
Bug reports: http://github.com/swihart/bridgedist/issues
0 errors | 0 warnings | 0 notes
brms (1.1.0)
Maintainer: Paul-Christian Buerkner paul.buerkner@gmail.com
Bug reports: https://github.com/paul-buerkner/brms/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
23: FUN(X[[i]], ...)
24: element_render(theme = theme, element = paste0("axis.title.", label, modify), label = labels[[label]][[i]],
expand_x = label == "y", expand_y = label == "x") at /Users/hadley/Documents/ggplot/ggplot2/R/layout.R:176
25: calc_element(element, theme) at /Users/hadley/Documents/ggplot/ggplot2/R/theme-elements.r:149
26: Reduce(combine_elements, parents, theme[[element]]) at /Users/hadley/Documents/ggplot/ggplot2/R/theme.r:538
27: f(init, x[[i]])
testthat results ================================================================
OK: 857 SKIPPED: 1 FAILED: 1
1. Error: plotting functions don't throw unexpected errors (@tests.plots.R#11)
Error: testthat unit tests failed
Execution halted
broman (0.64-3)
Maintainer: Karl W Broman kbroman@biostat.wisc.edu
0 errors | 0 warnings | 0 notes
broom (0.4.1)
Maintainer: David Robinson admiral.david@gmail.com
Bug reports: http://github.com/dgrtwo/broom/issues
0 errors | 0 warnings | 0 notes
brotli (0.8)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu
Bug reports: http://github.com/jeroenooms/brotli/issues
0 errors | 0 warnings | 0 notes
bsam (1.1.0)
Maintainer: Ian Jonsen ian.jonsen@mq.edu.au
Bug reports: https://github.com/ianjonsen/bsam/issues
1 error | 0 warnings | 0 notes
checking whether package ‘bsam’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/bsam.Rcheck/00install.out’ for details.
BTSPAS (2014.0901)
Maintainer: Carl J Schwarz cschwarz@stat.sfu.ca
1 error | 0 warnings | 1 note
checking whether package ‘BTSPAS’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/BTSPAS.Rcheck/00install.out’ for details.
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
burnr (0.1.1)
Maintainer: Steven Malevich malevich@email.arizona.edu
Bug reports: https://github.com/ltrr-arizona-edu/burnr/issues
0 errors | 0 warnings | 0 notes
CALF (0.1.3)
Maintainer: Stephanie Lane slane@unc.edu
0 errors | 0 warnings | 0 notes
capm (0.9.1)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
caret (6.0-72)
Maintainer: Max Kuhn mxkuhn@gmail.com
Bug reports: https://github.com/topepo/caret/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.0Mb
sub-directories of 1Mb or more:
data 1.5Mb
models 2.2Mb
caretEnsemble (2.0.0)
Maintainer: Zachary A. Deane-Mayer zach.mayer@gmail.com
Bug reports: https://github.com/zachmayer/caretEnsemble/issues
0 errors | 0 warnings | 0 notes
cate (1.0.4)
Maintainer: Qingyuan Zhao qyzhao@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘sva’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
catenary (1.1.1)
Maintainer: Jonathan Tuke simon.tuke@adelaide.edu.au
0 errors | 0 warnings | 0 notes
Causata (4.2-0)
Maintainer: Justin Hemann justinh@causata.com
0 errors | 0 warnings | 5 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking top-level files ... NOTE
Non-standard file/directory found at top level:
‘integration_tests’
checking R code for possible problems ... NOTE
BinaryCut: no visible global function definition for ‘quantile’
CleanNaFromContinuousFunction: no visible global function definition
for ‘median’
CleanNaFromContinuousFunction: no visible global function definition
for ‘na.omit’
GetMetadata.Connect: no visible global function definition for
‘dbGetQuery’
GetRawData.Connect: no visible global function definition for
‘dbGetQuery’
... 12 lines ...
‘contrasts’
predict.GlmnetModelDefinition: no visible global function definition
for ‘predict’
Undefined global functions or variables:
coef contrasts dbGetQuery median model.matrix na.omit predict
quantile read.csv sd terms.formula
Consider adding
importFrom("stats", "coef", "contrasts", "median", "model.matrix",
"na.omit", "predict", "quantile", "sd", "terms.formula")
importFrom("utils", "read.csv")
to your NAMESPACE file.
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
inst/doc/Makefile
Some ‘make’ programs ignore lines not ending in LF.
checking files in ‘vignettes’ ... NOTE
The following files look like leftovers/mistakes:
‘Causata-vignette.log’
Please remove them from your package.
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
cda (2.0.0)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
Bug reports: https://github.com/baptiste/cda/issues
0 errors | 0 warnings | 0 notes
cdom (0.1.0)
Maintainer: Philippe Massicotte pm@bios.au.dk
Bug reports: https://github.com/PMassicotte/cdom/issues
0 errors | 0 warnings | 0 notes
ChainLadder (0.2.3)
Maintainer: Markus Gesmann markus.gesmann@googlemail.com
Bug reports: https://github.com/mages/ChainLadder/issues
0 errors | 0 warnings | 0 notes
ChannelAttributionApp (1.1)
Maintainer: Davide Altomare davide.altomare@gmail.com
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Checking should be performed on sources prepared by ‘R CMD build’.
ChaosGame (0.2)
Maintainer: Manuela Schreyer manuelalarissa.schreyer@sbg.ac.at
0 errors | 0 warnings | 0 notes
checkmate (1.8.2)
Maintainer: Michel Lang michellang@gmail.com
Bug reports: https://github.com/mllg/checkmate/issues
0 errors | 0 warnings | 0 notes
choroplethr (3.5.2)
Maintainer: Ari Lamstein arilamstein@gmail.com
Bug reports: https://github.com/arilamstein/choroplethr/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
• KN = Know Nothing
• AM = Anti-Masonic
• N = Nullifier
... 8 lines ...
Taken from <URL:
http://en.wikipedia.org/wiki/List_of_United_States_presidential_election_results_by_state>
3/20/2014.
Loading required package: lattice
Quitting from lines 33-61 (h-creating-your-own-maps.Rmd)
Error: processing vignette 'h-creating-your-own-maps.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
choroplethrAdmin1 (1.1.0)
Maintainer: Ari Lamstein arilamstein@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 18.0Mb
sub-directories of 1Mb or more:
data 17.9Mb
choroplethrMaps (1.0)
Maintainer: Ari Lamstein arilamstein@gmail.com
Bug reports: https://github.com/trulia/choroplethrMaps/issues
0 errors | 0 warnings | 0 notes
chron (2.3-47)
Maintainer: Kurt Hornik Kurt.Hornik@R-project.org
0 errors | 0 warnings | 0 notes
CINOEDV (2.0)
Maintainer: Junliang Shang shangjunliang110@163.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
BatCINOEDV: no visible global function definition for ‘graphics.off’
CoInformation: no visible global function definition for ‘combn’
CombinationEntropy: no visible global function definition for ‘hist’
ConstructCompleteGraph: no visible global function definition for
‘dev.new’
ConstructCompleteGraph: no visible global function definition for ‘par’
ConstructCompleteGraph: no visible global function definition for
‘plot’
DegreeAnalysis: no visible global function definition for ‘dev.new’
... 19 lines ...
PlotTopEffects: no visible global function definition for ‘title’
Undefined global functions or variables:
barplot combn dev.new graphics.off hist install.packages layout lines
par plot rainbow runif title
Consider adding
importFrom("grDevices", "dev.new", "graphics.off", "rainbow")
importFrom("graphics", "barplot", "hist", "layout", "lines", "par",
"plot", "title")
importFrom("stats", "runif")
importFrom("utils", "combn", "install.packages")
to your NAMESPACE file.
cjoint (2.0.4)
Maintainer: Anton Strezhnev astrezhnev@fas.harvard.edu
0 errors | 0 warnings | 0 notes
classify (1.3)
Maintainer: Dr Chris Wheadon chris.wheadon@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘classify’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/classify.Rcheck/00install.out’ for details.
classyfire (0.1-2)
Maintainer: Eleni Chatzimichali ea.chatzimichali@gmail.com
Bug reports: https://github.com/eaHat/classyfire/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.boxRadial: no visible global function definition for ‘predict’
.radialSVM: no visible global function definition for ‘predict’
cfPredict: no visible global function definition for ‘predict’
getPerm5Num: no visible global function definition for ‘median’
getPerm5Num: no visible global function definition for ‘quantile’
ggClassPred: no visible global function definition for ‘ftable’
ggEnsHist: no visible global function definition for ‘sd’
ggPermHist: no visible global function definition for ‘sd’
Undefined global functions or variables:
ftable median predict quantile sd
Consider adding
importFrom("stats", "ftable", "median", "predict", "quantile", "sd")
to your NAMESPACE file.
clhs (0.5-6)
Maintainer: Pierre Roudier roudierp@landcareresearch.co.nz
0 errors | 0 warnings | 0 notes
clifro (3.0-0)
Maintainer: Blake Seers blake.seers@gmail.com
Bug reports: https://github.com/ropensci/clifro/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: ggplot2
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=Auckland&zoom=8&size=640x640&scale=2&maptype=hybrid&language=en-EN&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=Auckland&sensor=false
Quitting from lines 136-154 (cfStation.Rmd)
Error: processing vignette 'cfStation.Rmd' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ClimClass (2.1.0)
Maintainer: Emanuele Eccel emanuele.eccel@fmach.it
0 errors | 0 warnings | 0 notes
climwin (1.0.0)
Maintainer: Liam D. Bailey liam.bailey@anu.edu.au
Bug reports: https://github.com/LiamDBailey/climwin/issues
0 errors | 0 warnings | 0 notes
clusterfly (0.4)
Maintainer: Hadley Wickham h.wickham@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘rggobi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
clusternomics (0.1.0)
Maintainer: Evelina Gabasova egabasova@gmail.com
Bug reports: https://github.com/evelinag/clusternomics/issues
0 errors | 0 warnings | 0 notes
ClusterR (1.0.3)
Maintainer: Lampros Mouselimis mouselimislampros@gmail.com
Bug reports: https://github.com/mlampros/ClusterR/issues
0 errors | 0 warnings | 0 notes
clustrd (1.0.2)
Maintainer: Angelos Markos amarkos@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘clustrd-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cluspca
> ### Title: Joint dimension reduction and clustering of continuous data.
> ### Aliases: cluspca
>
> ### ** Examples
>
> data(macro)
> outRKM = cluspca(macro, 3, 2, method = "RKM", rotation = "varimax")
> plot(outRKM, cludesc = TRUE)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
cmaesr (1.0.2)
Maintainer: Jakob Bossek j.bossek@gmail.com
Bug reports: https://github.com/jakobbossek/cmaesr/issues
0 errors | 0 warnings | 0 notes
cobalt (1.3.0)
Maintainer: Noah Greifer noah@unc.edu
0 errors | 0 warnings | 0 notes
cocoreg (0.1.0)
Maintainer: Jussi Korpela jussi.korpela@iki.fi
0 errors | 0 warnings | 0 notes
codingMatrices (0.2.1)
Maintainer: Bill Venables Bill.Venables@gmail.com
0 errors | 0 warnings | 0 notes
codyn (1.1.0)
Maintainer: Matthew B. Jones jones@nceas.ucsb.edu
Bug reports: https://github.com/laurenmh/codyn/issues
0 errors | 0 warnings | 0 notes
coefplot (1.2.4)
Maintainer: Jared P. Lander packages@jaredlander.com
0 errors | 0 warnings | 0 notes
cofeatureR (1.0.1)
Maintainer: Fong Chun Chan fongchunchan@gmail.com
Bug reports: https://github.com/tinyheero/cofeatureR/issues
0 errors | 0 warnings | 0 notes
CollapsABEL (0.10.8)
Maintainer: Kaiyin Zhong kindlychung@gmail.com
Bug reports: https://bitbucket.org/kindlychung/collapsabel2/issues
1 error | 0 warnings | 0 notes
checking whether package ‘CollapsABEL’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/CollapsABEL.Rcheck/00install.out’ for details.
coloc (2.3-1)
Maintainer: Chris Wallace chris.wallace@cimr.cam.ac.uk
Bug reports: https://github.com/chr1swallace/coloc/issues
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: colorspace
Loading required package: MASS
Loading required package: BMA
Loading required package: survival
Loading required package: leaps
Loading required package: robustbase
Attaching package: ‘robustbase’
The following object is masked from ‘package:survival’:
heart
Loading required package: inline
Loading required package: rrcov
Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
Error: processing vignette 'vignette.Rnw' failed with diagnostics:
chunk 7
Error in library(snpStats) : there is no package called ‘snpStats’
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘snpStats’
checking R code for possible problems ... NOTE
approx.bf.p: no visible global function definition for ‘qnorm’
coeff.plot: no visible global function definition for ‘polygon’
coeff.plot: no visible global function definition for ‘abline’
coeff.plot: no visible global function definition for ‘arrows’
coeff.plot: no visible global function definition for ‘points’
coeff.plot: no visible global function definition for ‘segments’
coloc.abf.snpStats: no visible global function definition for
‘single.snp.tests’
coloc.abf.snpStats: no visible global function definition for
... 43 lines ...
cor glm impute.snps integrate lm object optimize pchisq pf points
polygon prcomp qnorm segments single.snp.tests snp.imputation var
vcov
Consider adding
importFrom("graphics", "abline", "arrows", "axis", "box", "points",
"polygon", "segments")
importFrom("stats", "as.formula", "coef", "coefficients", "cor", "glm",
"integrate", "lm", "optimize", "pchisq", "pf", "prcomp",
"qnorm", "var", "vcov")
importFrom("utils", "combn")
to your NAMESPACE file.
colormap (0.1.3)
Maintainer: Bhaskar Karambelkar bhaskarvk@gmail.com
Bug reports: https://github.com/bhaskarvk/colormap/issues
0 errors | 0 warnings | 0 notes
colorplaner (0.1.3)
Maintainer: William Murphy william.murphy.rd@gmail.com
Bug reports: https://github.com/wmurphyrd/colorplaner/issues
0 errors | 0 warnings | 0 notes
CommT (0.1.1)
Maintainer: Michael Gruenstaeudl mi.gruenstaeudl@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CommT.anova: no visible global function definition for ‘aov’
CommT.legendpos: no visible global function definition for ‘quantile’
CommT.plotcolors: no visible global function definition for ‘hcl’
Undefined global functions or variables:
aov hcl quantile
Consider adding
importFrom("grDevices", "hcl")
importFrom("stats", "aov", "quantile")
to your NAMESPACE file.
complmrob (0.6.1)
Maintainer: David Kepplinger david.kepplinger@gmail.com
0 errors | 0 warnings | 0 notes
confidence (1.1-0)
Maintainer: Dennis J. J. Walvoort dennis.Walvoort@wur.nl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
conf: no visible global function definition for ‘read.csv’
conf: no visible global function definition for ‘write.csv’
mya.conf_input : <anonymous>: no visible global function definition for
‘sd’
mya.conf_input : <anonymous>: no visible global function definition for
‘qt’
mya.conf_input : <anonymous>: no visible global function definition for
‘pt’
plot.mya: no visible global function definition for ‘dt’
plot.mya: no visible global function definition for ‘rgb’
write_html.conf_input: no visible global function definition for
‘browseURL’
Undefined global functions or variables:
browseURL dt pt qt read.csv rgb sd write.csv
Consider adding
importFrom("grDevices", "rgb")
importFrom("stats", "dt", "pt", "qt", "sd")
importFrom("utils", "browseURL", "read.csv", "write.csv")
to your NAMESPACE file.
conformal (0.2)
Maintainer: Isidro Cortes isidrolauscher@gmail.com
0 errors | 0 warnings | 0 notes
Conigrave (0.1.0)
Maintainer: James Conigrave james.conigrave@gmail.com
0 errors | 0 warnings | 0 notes
contoureR (1.0.5)
Maintainer: Nicholas Hamilton n.hamilton@unsw.edu.au
0 errors | 0 warnings | 0 notes
cooccur (1.3)
Maintainer: Daniel M. Griffith griffith.dan@gmail.com
0 errors | 0 warnings | 0 notes
CopulaDTA (0.0.4)
Maintainer: Victoria N Nyaga victoria.nyaga@outlook.com
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 291-292 (CopulaDTA_Vignette.Rmd)
Error: processing vignette 'CopulaDTA_Vignette.Rmd' failed with diagnostics:
index out of bounds ('unit' subsetting)
Execution halted
corkscrew (1.1)
Maintainer: Santhosh Sasanapuri santhosh458@gmail.com
0 errors | 0 warnings | 0 notes
corrr (0.2.1)
Maintainer: Simon Jackson drsimonjackson@gmail.com
Bug reports: https://github.com/drsimonj/corrr/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘corrr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: network_plot
> ### Title: Network plot of a correlation data frame
> ### Aliases: network_plot
>
> ### ** Examples
>
> x <- correlate(mtcars)
> network_plot(x)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
cosinor (1.1)
Maintainer: Michael Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cosinor.lm: no visible binding for global variable ‘na.omit’
cosinor.lm: no visible global function definition for ‘terms’
cosinor.lm: no visible global function definition for ‘as.formula’
cosinor.lm: no visible global function definition for ‘lm’
cosinor_analyzer: no visible binding for global variable ‘vitamind’
cosinor_analyzer : <anonymous>: no visible global function definition
for ‘as.formula’
ggplot.cosinor.lm: no visible global function definition for ‘predict’
predict.cosinor.lm: no visible global function definition for ‘fitted’
... 7 lines ...
summary.cosinor.lm: no visible global function definition for ‘pnorm’
test_cosinor: no visible global function definition for ‘pchisq’
test_cosinor: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
as.formula fitted lm na.omit pchisq pnorm predict qnorm rbinom rnorm
runif terms vcov vitamind
Consider adding
importFrom("stats", "as.formula", "fitted", "lm", "na.omit", "pchisq",
"pnorm", "predict", "qnorm", "rbinom", "rnorm", "runif",
"terms", "vcov")
to your NAMESPACE file.
CosmoPhotoz (0.1)
Maintainer: Rafael S. de Souza rafael.2706@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CosmoPhotoZestimator: no visible global function definition for
‘predict’
computeCombPCA: no visible global function definition for ‘prcomp’
computeDiagPhotoZ: no visible global function definition for ‘sd’
computeDiagPhotoZ: no visible global function definition for ‘median’
computeDiagPhotoZ: no visible global function definition for ‘mad’
glmPredictPhotoZ: no visible global function definition for ‘predict’
glmTrainPhotoZ: no visible global function definition for ‘glm’
glmTrainPhotoZ: no visible global function definition for ‘Gamma’
glmTrainPhotoZ: no visible global function definition for
‘inverse.gaussian’
plotDiagPhotoZ: no visible global function definition for ‘median’
plotDiagPhotoZ: no visible global function definition for ‘mad’
Undefined global functions or variables:
Gamma glm inverse.gaussian mad median prcomp predict sd
Consider adding
importFrom("stats", "Gamma", "glm", "inverse.gaussian", "mad",
"median", "prcomp", "predict", "sd")
to your NAMESPACE file.
countytimezones (1.0.0)
Maintainer: Brooke Anderson brooke.anderson@colostate.edu
Bug reports: https://github.com/geanders/countytimezones/issues
0 errors | 0 warnings | 0 notes
countyweather (0.1.0)
Maintainer: Rachel Severson rachel.severson@colostate.edu
0 errors | 0 warnings | 0 notes
covmat (1.0)
Maintainer: Rohit Arora emailrohitarora@gmail.com
0 errors | 0 warnings | 0 notes
cowplot (0.7.0)
Maintainer: Claus O. Wilke wilke@austin.utexas.edu
Bug reports: https://github.com/wilkelab/cowplot/issues
0 errors | 0 warnings | 0 notes
cplm (0.7-4)
Maintainer: Yanwei (Wayne) Zhang actuary_zhang@hotmail.com
0 errors | 0 warnings | 0 notes
crawl (2.0.1)
Maintainer: Devin S. Johnson devin.johnson@noaa.gov
0 errors | 0 warnings | 0 notes
cricketr (0.0.13)
Maintainer: Tinniam V Ganesh tvganesh.85@gmail.com
Bug reports: https://github.com/tvganesh/cricketr/issues
0 errors | 0 warnings | 0 notes
crmPack (0.2.0)
Maintainer: Daniel Sabanes Bove sabanesd@roche.com
1 error | 0 warnings | 0 notes
checking whether package ‘crmPack’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/crmPack.Rcheck/00install.out’ for details.
Crossover (0.1-16)
Maintainer: Kornelius Rohmeyer rohmeyer@small-projects.de
Bug reports: https://github.com/kornl/Crossover/issues
1 error | 0 warnings | 0 notes
checking whether package ‘Crossover’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Crossover.Rcheck/00install.out’ for details.
CRTgeeDR (1.2)
Maintainer: Melanie Prague mprague@hsph.harvard.edu
0 errors | 0 warnings | 0 notes
csp (0.1.0)
Maintainer: Eric Persson expersso5@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 11.0Mb
sub-directories of 1Mb or more:
data 10.9Mb
cutoffR (1.0)
Maintainer: Lingbing Feng fenglb88@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Cut: no visible global function definition for ‘cor’
MissSimulation: no visible global function definition for ‘rbinom’
cutoff: no visible global function definition for ‘cor’
Undefined global functions or variables:
cor rbinom
Consider adding
importFrom("stats", "cor", "rbinom")
to your NAMESPACE file.
cvxclustr (1.1.1)
Maintainer: Eric C. Chi ecchi1105@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
create_clustering_problem: no visible global function definition for
‘rnorm’
Undefined global functions or variables:
rnorm
Consider adding
importFrom("stats", "rnorm")
to your NAMESPACE file.
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
src/Makevars
Some ‘make’ programs ignore lines not ending in LF.
Cyclops (1.2.2)
Maintainer: Marc A. Suchard msuchard@ucla.edu
Bug reports: https://github.com/ohdsi/cyclops/issues
0 errors | 0 warnings | 0 notes
cystiSim (0.1.0)
Maintainer: Brecht Devleesschauwer brechtdv@gmail.com
Bug reports: https://github.com/brechtdv/cystiSim/issues
0 errors | 0 warnings | 0 notes
dae (2.7-20)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
0 errors | 0 warnings | 0 notes
dams (0.2)
Maintainer: Joseph Stachelek stachel2@msu.edu
Bug reports: http://www.github.com/jsta/dams/issues
0 errors | 0 warnings | 0 notes
darch (0.12.0)
Maintainer: Martin Drees mdrees@stud.fh-dortmund.de
Bug reports: https://github.com/maddin79/darch/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘gputools’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘gputools’
darksky (1.0.0)
Maintainer: Bob Rudis bob@rud.is
Bug reports: https://github.com/hrbrmstr/darksky/issues
0 errors | 0 warnings | 0 notes
data.table (1.9.6)
Maintainer: Matt Dowle mattjdowle@gmail.com
Bug reports: https://github.com/Rdatatable/data.table/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/tests.R’ failed.
Last 13 lines of output:
Test 167.2 ran without errors but failed check that x equals y:
> x = names(print(ggplot(DT) + geom_hex(aes(b, f)) + facet_wrap(~grp)))
[1] "data" "layout" "plot"
> y = c("data", "panel", "plot")
[1] "data" "panel" "plot"
Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
Tests 1441-1444 not run. If required install the 'fr_FR.utf8' locale.
Error in eval(expr, envir, enclos) :
2 errors out of 4428 (lastID=1557.4, endian=little, sizeof(long double)==16) in inst/tests/tests.Rraw on Mon Nov 7 11:51:45 2016. Search tests.Rraw for test numbers: 167, 167.2.
Calls: test.data.table -> sys.source -> eval -> eval
Execution halted
DataExplorer (0.2.6)
Maintainer: Boxuan Cui boxuancui@gmail.com
Bug reports: https://github.com/boxuancui/DataExplorer/issues
0 errors | 0 warnings | 0 notes
dcmr (1.0)
Maintainer: Diane Losardo dlosardo@amplify.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
DrawAlphas: no visible global function definition for ‘rmultinom’
DrawClasses: no visible global function definition for ‘runif’
GetGammaNames: no visible global function definition for ‘combn’
GetLambdaNamesForItem: no visible global function definition for
‘combn’
SampleParameterEstimates: no visible global function definition for
‘rnorm’
plot,attribute.class-missing: no visible binding for global variable
‘attr.number’
... 6 lines ...
variable ‘mean.attr.profile’
summary,attribute.class: no visible binding for global variable ‘value’
summary,attribute.profile.class: no visible binding for global variable
‘max.class’
Undefined global functions or variables:
attr.number attr.profile.number combn max.class mean.attr
mean.attr.profile rmultinom rnorm runif value
Consider adding
importFrom("stats", "rmultinom", "rnorm", "runif")
importFrom("utils", "combn")
to your NAMESPACE file.
ddpcr (1.5)
Maintainer: Dean Attali daattali@gmail.com
Bug reports: https://github.com/daattali/ddpcr/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
)
Parsed with column specification:
cols(
`Assay1 Amplitude` = col_double(),
`Assay2 Amplitude` = col_double(),
Cluster = col_integer()
)
... 8 lines ...
cols(
`Assay1 Amplitude` = col_double(),
`Assay2 Amplitude` = col_double(),
Cluster = col_integer()
)
DONE (0 seconds)
Initializing plate of type `custom_thresholds`... DONE (0 seconds)
Quitting from lines 442-443 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Aesthetics must be either length 1 or the same as the data (4): x, y, size, hjust, vjust, fontface
Execution halted
Deducer (0.7-9)
Maintainer: Ian Fellows ian@fellstat.com
1 error | 0 warnings | 0 notes
checking whether package ‘Deducer’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Deducer.Rcheck/00install.out’ for details.
DeLorean (1.2.4)
Maintainer: John Reid john.reid@mrc-bsu.cam.ac.uk
0 errors | 0 warnings | 0 notes
demi (1.1.2)
Maintainer: Sten Ilmjarv sten.ilmjarv@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘affxparser’ ‘affy’ ‘oligo’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
dendextend (1.3.0)
Maintainer: Tal Galili tal.galili@gmail.com
Bug reports: https://github.com/talgalili/dendextend/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages which this enhances but not available for checking:
‘labeltodendro’ ‘dendroextras’
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘dendroextras’, ‘moduleColor’
DengueRT (1.0.1)
Maintainer: Carlos Sebrango sebrango@uniss.edu.cu
0 errors | 0 warnings | 0 notes
DepthProc (1.0.7)
Maintainer: Zygmunt Zawadzki zawadzkizygmunt@gmail.com
0 errors | 0 warnings | 0 notes
DescribeDisplay (0.2.5)
Maintainer: Di Cook dicook@monash.edu
Bug reports: https://github.com/ggobi/DescribeDisplay/issues
0 errors | 0 warnings | 0 notes
detzrcr (0.1.2)
Maintainer: Magnus Kristoffersen magnus.kristoffersen@geo.uio.no
0 errors | 0 warnings | 0 notes
dfexplore (0.2.1)
Maintainer: Joris Muller joris.muller@etu.unistra.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
simulate_dataframe : generate_dumb_answer: no visible global function
definition for ‘rbinom’
simulate_dataframe : generate_dumb_answer: no visible global function
definition for ‘rnorm’
simulate_dataframe : generate_initial: no visible global function
definition for ‘rbinom’
simulate_dataframe: no visible binding for global variable ‘randu’
simulate_dataframe: no visible global function definition for ‘rbinom’
simulate_dataframe: no visible global function definition for ‘rnorm’
simulate_dataframe: no visible global function definition for ‘rpois’
simulate_dataframe : add_NAs: no visible global function definition for
‘rbinom’
Undefined global functions or variables:
randu rbinom rnorm rpois
Consider adding
importFrom("datasets", "randu")
importFrom("stats", "rbinom", "rnorm", "rpois")
to your NAMESPACE file.
DFIT (1.0-2)
Maintainer: Victor H. Cervantes vhcervantesb@unal.edu.co
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Ase1pl: no visible global function definition for ‘integrate’
Ase2pl: no visible global function definition for ‘integrate’
Ase3pl: no visible global function definition for ‘integrate’
Ase3pl: no visible global function definition for ‘qnorm’
Calculate1plProb: no visible global function definition for ‘plogis’
Calculate2plProb: no visible global function definition for ‘plogis’
Calculate3plProb: no visible global function definition for ‘plogis’
CalculateGrmExp: no visible global function definition for ‘plogis’
Cdif: no visible global function definition for ‘integrate’
... 6 lines ...
PlotNcdif: no visible global function definition for ‘density’
ProductProbabilities: no visible global function definition for
‘plogis’
SignedArea: no visible global function definition for ‘integrate’
UnsignedArea: no visible global function definition for ‘integrate’
Undefined global functions or variables:
density integrate plogis qnorm quantile
Consider adding
importFrom("stats", "density", "integrate", "plogis", "qnorm",
"quantile")
to your NAMESPACE file.
dfpk (1.0)
Maintainer: Artemis Toumazi artemis.toumazi@inserm.fr
Bug reports: http://github.com/artemis-toumazi/dfpk/issues
0 errors | 0 warnings | 0 notes
dggridR (0.1.11)
Maintainer: Richard Barnes rbarnes@umn.edu
Bug reports: https://github.com/r-barnes/dggridR/
0 errors | 0 warnings | 0 notes
diagis (0.1.0)
Maintainer: Jouni Helske jouni.helske@jyu.fi
0 errors | 0 warnings | 0 notes
DiallelAnalysisR (0.1.1)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
0 errors | 0 warnings | 0 notes
dielectric (0.2.3)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘methods’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
L2eV: no visible binding for global variable ‘constants’
L2w: no visible binding for global variable ‘constants’
dielectric: no visible global function definition for ‘new’
dielectric2plot: no visible global function definition for ‘reshape’
eV2L: no visible binding for global variable ‘constants’
t2eV: no visible binding for global variable ‘constants’
Undefined global functions or variables:
constants new reshape
Consider adding
importFrom("methods", "new")
importFrom("stats", "reshape")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
diffeR (0.0-4)
Maintainer: Al� Santacruz amsantac@unal.edu.co
0 errors | 0 warnings | 0 notes
difNLR (0.1.0)
Maintainer: Adela Drabinova adela.drabinova@gmail.com
0 errors | 0 warnings | 0 notes
directlabels (2015.12.16)
Maintainer: Toby Dylan Hocking tdhock5@gmail.com
0 errors | 0 warnings | 0 notes
disclapmix (1.6.2)
Maintainer: Mikkel Meyer Andersen mikl@math.aau.dk
0 errors | 0 warnings | 0 notes
diveRsity (1.9.89)
Maintainer: Kevin Keenan kkeenan02@qub.ac.uk
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
DiversityOccupancy (1.0.5)
Maintainer: Derek Corcoran derek.corcoran.barrios@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘DiversityOccupancy’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/DiversityOccupancy.Rcheck/00install.out’ for details.
dlstats (0.0.9)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com
Bug reports: https://github.com/GuangchuangYu/dlstats/issues
0 errors | 0 warnings | 0 notes
dMod (0.3.2)
Maintainer: Daniel Kaschek daniel.kaschek@physik.uni-freiburg.de
0 errors | 0 warnings | 0 notes
doBy (4.5-15)
Maintainer: S�ren H�jsgaard sorenh@math.aau.dk
0 errors | 0 warnings | 0 notes
DoTC (0.2)
Maintainer: Holger Sennhenn-Reulen hsennhenn-reulen@dpz.eu
0 errors | 0 warnings | 0 notes
dotwhisker (0.2.2)
Maintainer: Yue Hu yue-hu-1@uiowa.edu
Bug reports: https://github.com/fsolt/dotwhisker/issues
0 errors | 0 warnings | 0 notes
dpcR (0.3)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com
Bug reports: https://github.com/michbur/dpcR/issues
0 errors | 0 warnings | 0 notes
dplyr (0.5.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/dplyr/issues
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Missing or unexported object: ‘RSQLite::rsqliteVersion’
DrBats (0.1.4)
Maintainer: Gabrielle Weinrott gabrielle.weinrott@supagro.inra.fr
0 errors | 0 warnings | 0 notes
drLumi (0.1.2)
Maintainer: Hector Sanz hector.sanz@isglobal.org
0 errors | 0 warnings | 0 notes
dslice (1.1.5)
Maintainer: Chao Ye yechao1009@gmail.com
0 errors | 0 warnings | 0 notes
dsm (2.2.13)
Maintainer: Laura Marshall lhm@st-andrews.ac.uk
Bug reports: https://github.com/DistanceDevelopment/dsm/issues
0 errors | 0 warnings | 0 notes
DstarM (0.1.0)
Maintainer: Don van den Bergh donvdbergh@hotmail.com
0 errors | 0 warnings | 0 notes
DTR (1.7)
Maintainer: Xinyu Tang xtang@uams.edu
0 errors | 0 warnings | 0 notes
DTRlearn (1.2)
Maintainer: Ying Liu yl2802@cumc.columbia.edu
0 errors | 0 warnings | 0 notes
dtwclust (2.3.0)
Maintainer: Alexis Sarda alexis.sarda@gmail.com
Bug reports: https://github.com/asardaes/dtwclust/issues
0 errors | 0 warnings | 0 notes
dtwSat (0.2.1)
Maintainer: Victor Maus vwmaus1@gmail.com
0 errors | 0 warnings | 0 notes
DVHmetrics (0.3.6)
Maintainer: Daniel Wollschlaeger wollschlaeger@uni-mainz.de
0 errors | 0 warnings | 0 notes
DynNom (3.0.1)
Maintainer: Amirhossein Jalali a.jalali2@nuigalway.ie
1 error | 0 warnings | 0 notes
checking whether package ‘DynNom’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/DynNom.Rcheck/00install.out’ for details.
dynr (0.1.7)
Maintainer: Lu Ou lzo114@psu.edu
1 error | 0 warnings | 0 notes
checking whether package ‘dynr’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/dynr.Rcheck/00install.out’ for details.
dynsim (1.2.1)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com
Bug reports: https://github.com/christophergandrud/dynsim/issues
0 errors | 0 warnings | 0 notes
dynsurv (0.3-3)
Maintainer: Wenjie Wang wenjie.2.wang@uconn.edu
Bug reports: https://github.com/wenjie2wang/dynsurv/issues
0 errors | 0 warnings | 0 notes
earlywarnings (1.0.59)
Maintainer: Vasilis Dakos vasilis.dakos@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
PlotPotential: no visible global function definition for ‘aes’
PlotPotential: no visible global function definition for ‘geom_tile’
PlotPotential: no visible global function definition for
‘scale_fill_gradient’
PlotPotential: no visible global function definition for ‘stat_contour’
PlotPotential: no visible global function definition for ‘xlab’
PlotPotential: no visible global function definition for ‘ylab’
PlotPotential: no visible global function definition for ‘labs’
bdstest_ews: no visible global function definition for ‘dev.new’
... 50 lines ...
surrogates_ews: no visible global function definition for ‘mtext’
Undefined global functions or variables:
abline aes contour dev.new geom_tile grid hist labs layout legend
lines mtext par plot points rainbow scale_fill_gradient stat_contour
text title topo.colors xlab ylab
Consider adding
importFrom("grDevices", "dev.new", "rainbow", "topo.colors")
importFrom("graphics", "abline", "contour", "grid", "hist", "layout",
"legend", "lines", "mtext", "par", "plot", "points", "text",
"title")
to your NAMESPACE file.
earthtones (0.1.0)
Maintainer: Will Cornwell wcornwell@gmail.com
0 errors | 0 warnings | 0 notes
EasyHTMLReport (0.1.1)
Maintainer: Yohei Sato yohei0511@gmail.com
0 errors | 0 warnings | 3 notes
checking top-level files ... NOTE
Non-standard files/directories found at top level:
‘easy_html_report_tmp_1376284934.59207.tsv’
‘easy_html_report_tmp_1376284935.5951.tsv’
‘easy_html_report_tmp_1376284936.59848.tsv’
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘base64enc’ ‘knitr’ ‘markdown’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.file_attachment: no visible global function definition for
‘base64encode’
.plot_attachment: no visible global function definition for ‘dev.off’
.update_list: no visible global function definition for ‘modifyList’
easyHtmlReport: no visible global function definition for ‘knit’
easyHtmlReport: no visible global function definition for
‘markdownToHTML’
mime_part.data.frame: no visible global function definition for
‘write.table’
mime_part.ggplot: no visible binding for global variable ‘pdf’
mime_part.matrix: no visible global function definition for
‘write.table’
mime_part.trellis: no visible binding for global variable ‘pdf’
simpleHtmlReport : <anonymous>: no visible global function definition
for ‘write.table’
Undefined global functions or variables:
base64encode dev.off knit markdownToHTML modifyList pdf write.table
Consider adding
importFrom("grDevices", "dev.off", "pdf")
importFrom("utils", "modifyList", "write.table")
to your NAMESPACE file.
ecb (0.2)
Maintainer: Eric Persson expersso5@gmail.com
1 error | 1 warning | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
5: check_status(req)
6: stop("HTTP failure: ", req$status_code, "\n", httr::content(req, "text"))
testthat results ================================================================
OK: 2 SKIPPED: 0 FAILED: 5
1. Error: get_dimensions returns a list of data frames (@tests.R#16)
2. Failure: malformed series key returns 404 error (@tests.R#25)
3. Failure: malformed series key returns 404 error (@tests.R#26)
4. Failure: malformed series key returns 404 error (@tests.R#27)
5. Error: get_description returns a character vector (@tests.R#32)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 114-116 (ecb_sdw.Rmd)
Error: processing vignette 'ecb_sdw.Rmd' failed with diagnostics:
HTTP failure: 500
<HTML><HEAD>
<TITLE>Internal Server Error</TITLE>
</HEAD><BODY>
<H1>Internal Server Error - Read</H1>
The server encountered an internal error or misconfiguration and was unable to
complete your request.<P>
Reference #3.f0fd717.1478542055.756990
</BODY></HTML>
Execution halted
ecoengine (1.10.0)
Maintainer: Karthik Ram karthik.ram@gmail.com
Bug reports: https://github.com/ropensci/ecoengine/issues
0 errors | 0 warnings | 0 notes
EcoGenetics (1.2.0-3)
Maintainer: Leandro Roser learoser@gmail.com
0 errors | 0 warnings | 0 notes
ecr (1.0.1)
Maintainer: Jakob Bossek j.bossek@gmail.com
Bug reports: https://github.com/jakobbossek/ecr/issues
0 errors | 0 warnings | 0 notes
edarf (1.0.0)
Maintainer: Zachary M. Jones zmj@zmjones.com
Bug reports: https://github.com/zmjones/edarf
0 errors | 0 warnings | 0 notes
edeaR (0.4.4)
Maintainer: Gert Janssenswillen gert.janssenswillen@uhasselt.be
0 errors | 0 warnings | 0 notes
edfReader (1.1.1)
Maintainer: Jan Vis jan@visconsultancy.eu
0 errors | 0 warnings | 0 notes
edgar (1.0.6)
Maintainer: Gunratan Lonare lonare.gunratan@gmail.com
0 errors | 0 warnings | 0 notes
eechidna (0.1)
Maintainer: Ben Marwick benmarwick@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘eechidna-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hexDat
> ### Title: Electorate hexagon data in a tidy form
> ### Aliases: hexDat
> ### Keywords: datasets
>
... 18 lines ...
layout
> p <- ggplot(hexDat, aes(xcent, ycent, text = Electorate)) +
+ geom_hex(stat = "identity") +
+ lims(x=c(-80, 8), y=c(-40, 50))
> ggplotly(p, tooltip = "text")
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
EEM (1.1.1)
Maintainer: Vipavee Trivittayasil vipavee.tri@gmail.com
0 errors | 0 warnings | 0 notes
eemR (0.1.4)
Maintainer: Philippe Massicotte pm@bios.au.dk
Bug reports: https://github.com/PMassicotte/eemR/issues
0 errors | 0 warnings | 0 notes
eeptools (1.0.0)
Maintainer: Jared E. Knowles jknowles@gmail.com
0 errors | 0 warnings | 0 notes
EFDR (0.1.1)
Maintainer: Andrew Zammit-Mangion andrewzm@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.gdf : find_loss: no visible global function definition for ‘rnorm’
.p.values : <anonymous>: no visible global function definition for
‘pnorm’
.relist.dwt: no visible global function definition for ‘relist’
.relist.dwt: no visible global function definition for ‘as’
.std.wav.coeff : <anonymous>: no visible global function definition for
‘mad’
regrid: no visible global function definition for ‘predict’
regrid: no visible global function definition for ‘var’
regrid: no visible global function definition for ‘medpolish’
Undefined global functions or variables:
as mad medpolish pnorm predict relist rnorm var
Consider adding
importFrom("methods", "as")
importFrom("stats", "mad", "medpolish", "pnorm", "predict", "rnorm",
"var")
importFrom("utils", "relist")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
EffectLiteR (0.4-2)
Maintainer: Axel Mayer amayer2010@gmail.com
0 errors | 0 warnings | 0 notes
ega (1.0.1)
Maintainer: Daniel Schmolze ega@schmolze.com
0 errors | 0 warnings | 0 notes
egcm (1.0.8)
Maintainer: Matthew Clegg matthewcleggphd@gmail.com
0 errors | 0 warnings | 0 notes
eiCompare (1.7)
Maintainer: Loren Collingwood loren.collingwood@ucr.edu
0 errors | 0 warnings | 0 notes
emil (2.2.6)
Maintainer: Christofer Backlin emil@christofer.backlin.se
Bug reports: https://github.com/Molmed/emil/issues
0 errors | 0 warnings | 0 notes
emojifont (0.3.4)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com
Bug reports: https://github.com/GuangchuangYu/emojifont/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 119-144 (emojifont.Rmd)
Error: processing vignette 'emojifont.Rmd' failed with diagnostics:
there is no package called 'ggtree'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘ggtree’
EmpiricalCalibration (1.2.0)
Maintainer: Martijn Schuemie schuemie@ohdsi.org
Bug reports: https://github.com/OHDSI/EmpiricalCalibration/issues
0 errors | 0 warnings | 0 notes
emuR (0.1.9)
Maintainer: Raphael Winkelmann raphael@phonetik.uni-muenchen.de
Bug reports: https://github.com/IPS-LMU/emuR/issues
0 errors | 0 warnings | 0 notes
enigma (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropengov/enigma/issues
0 errors | 0 warnings | 0 notes
enpls (5.0)
Maintainer: Nan Xiao me@nanx.me
Bug reports: https://github.com/road2stat/enpls/issues
0 errors | 0 warnings | 0 notes
EpiDynamics (0.3.0)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
episensr (0.7.2)
Maintainer: Denis Haine denis.haine@gmail.com
Bug reports: https://github.com/dhaine/episensr/issues
0 errors | 0 warnings | 0 notes
episheet (0.2.0)
Maintainer: James Black james@epijim.uk
Bug reports: https://github.com/epijim/episheet/issues
0 errors | 0 warnings | 0 notes
ESGtoolkit (0.1)
Maintainer: Thierry Moudiki thierry.moudiki@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
bands.add: no visible global function definition for ‘polygon’
bands.add: no visible global function definition for ‘lines’
bands.plot: no visible global function definition for ‘plot’
bands.plot: no visible global function definition for ‘polygon’
bands.plot: no visible global function definition for ‘lines’
bands.plot: no visible global function definition for ‘abline’
esgcortest: no visible global function definition for ‘deltat’
esgcortest: no visible global function definition for ‘ts’
esgcortest : <anonymous>: no visible global function definition for
... 66 lines ...
element_blank end geom_density geom_point is.ts lines matplot par
plot points polygon pt qnorm qt quantile scale_color_manual
scale_fill_manual sd start t.test theme time ts tsp window xlab ylab
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("graphics", "abline", "lines", "matplot", "par", "plot",
"points", "polygon")
importFrom("stats", "cor", "cor.test", "deltat", "end", "is.ts", "pt",
"qnorm", "qt", "quantile", "sd", "start", "t.test", "time",
"ts", "tsp", "window")
to your NAMESPACE file.
etl (0.3.3.1)
Maintainer: Ben Baumer ben.baumer@gmail.com
Bug reports: https://github.com/beanumber/etl/issues
0 errors | 0 warnings | 0 notes
etm (0.6-2)
Maintainer: Arthur Allignol arthur.allignol@uni-ulm.de
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
avec.cov: no visible global function definition for ‘qnorm’
closPseudo: no visible global function definition for ‘terms’
etmCIF: no visible global function definition for ‘model.extract’
lines.etm: no visible global function definition for ‘lines’
phiPseudo: no visible global function definition for ‘terms’
plot.clos.etm: no visible global function definition for ‘par’
plot.clos.etm: no visible global function definition for ‘split.screen’
plot.clos.etm: no visible global function definition for ‘screen’
plot.clos.etm: no visible global function definition for ‘plot’
... 10 lines ...
print.summary.etm: no visible global function definition for ‘quantile’
print.summary.etmCIF: no visible global function definition for
‘quantile’
Undefined global functions or variables:
axis box close.screen lines model.extract par plot qnorm quantile
screen segments split.screen terms
Consider adding
importFrom("graphics", "axis", "box", "close.screen", "lines", "par",
"plot", "screen", "segments", "split.screen")
importFrom("stats", "model.extract", "qnorm", "quantile", "terms")
to your NAMESPACE file.
eurostat (2.2.1)
Maintainer: Lahti Leo louhos@googlegroups.com
Bug reports: https://github.com/ropengov/eurostat/issues
0 errors | 0 warnings | 0 notes
evaluate (0.10)
Maintainer: Yihui Xie xie@yihui.name
Bug reports: https://github.com/hadley/evaluate/issues
0 errors | 0 warnings | 0 notes
evolqg (0.2-4)
Maintainer: Diogo Melo diogro@usp.br
Bug reports: https://github.com/lem-usp/evolqg/issues
0 errors | 0 warnings | 0 notes
Evomorph (0.9)
Maintainer: Juan Manuel Cabrera juanmanuelcabrera1@gmail.com
0 errors | 0 warnings | 0 notes
explor (0.2.1)
Maintainer: Julien Barnier julien.barnier@ens-lyon.fr
Bug reports: https://github.com/juba/explor/issues
0 errors | 0 warnings | 0 notes
exploreR (0.1)
Maintainer: Michael Coates azhain@gmail.com
0 errors | 0 warnings | 0 notes
exreport (0.4.1)
Maintainer: Jacinto Arias jacinto.arias@uclm.es
0 errors | 0 warnings | 0 notes
ExtDist (0.6-3)
Maintainer: A. Jonathan R. Godfrey a.j.godfrey@massey.ac.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
DistSelCriteria: no visible binding for global variable ‘getS3method’
bestDist: no visible global function definition for ‘getS3method’
compareDist: no visible global function definition for ‘hist’
compareDist: no visible global function definition for ‘curve’
dBeta: no visible global function definition for ‘dbeta’
dBeta_ab: no visible global function definition for ‘dbeta’
dJohnsonSU: no visible global function definition for ‘dnorm’
dLogistic: no visible global function definition for ‘dlogis’
dNormal: no visible global function definition for ‘dnorm’
... 46 lines ...
abline capture.output coef cov2cor curve dbeta dlogis dnorm dunif
getS3method hist median par pbeta plogis plot pnorm punif qbeta
qlogis qnorm qunif rbeta rlogis rnorm runif sd uniroot var
Consider adding
importFrom("graphics", "abline", "curve", "hist", "par", "plot")
importFrom("stats", "coef", "cov2cor", "dbeta", "dlogis", "dnorm",
"dunif", "median", "pbeta", "plogis", "pnorm", "punif",
"qbeta", "qlogis", "qnorm", "qunif", "rbeta", "rlogis",
"rnorm", "runif", "sd", "uniroot", "var")
importFrom("utils", "capture.output", "getS3method")
to your NAMESPACE file.
extracat (1.7-4)
Maintainer: Alexander Pilhoefer alexander.pilhoefer@gmail.com
0 errors | 0 warnings | 0 notes
eyelinker (0.1)
Maintainer: Simon Barthelme simon.barthelme@gipsa-lab.fr
0 errors | 0 warnings | 0 notes
eyetrackingR (0.1.6)
Maintainer: Jacob Dink jacobwdink@gmail.com
Bug reports: https://github.com/jwdink/eyetrackingR/issues
0 errors | 0 warnings | 0 notes
ez (4.4-0)
Maintainer: Michael A. Lawrence mike.lwrnc@gmail.com
0 errors | 0 warnings | 0 notes
ezsim (0.5.5)
Maintainer: TszKin Julian Chan ctszkin@gmail.com
Bug reports: TszKin Julian Chan ctszkin@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
createFormula: no visible global function definition for ‘tail’
createFormula: no visible global function definition for ‘head’
createFormula: no visible global function definition for ‘as.formula’
ezsim: no visible global function definition for ‘runif’
plot.ezsim: no visible global function definition for ‘quantile’
plot.ezsim: no visible global function definition for ‘head’
plot.ezsim: no visible global function definition for ‘tail’
plot.ezsim: no visible global function definition for ‘plot’
plot.ezsim: no visible binding for global variable ‘dnorm’
... 8 lines ...
plot.summary.ezsim: no visible global function definition for ‘dev.off’
plot.summary.ezsim : <anonymous>: no visible global function definition
for ‘dev.new’
Undefined global functions or variables:
as.formula dev.new dev.off dnorm head pdf plot quantile runif tail
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "pdf")
importFrom("graphics", "plot")
importFrom("stats", "as.formula", "dnorm", "quantile", "runif")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
factoextra (1.0.3)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com
Bug reports: https://github.com/kassambara/factoextra/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘factoextra-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fviz_ca
> ### Title: Visualize Correspondence Analysis
> ### Aliases: fviz_ca fviz_ca_biplot fviz_ca_col fviz_ca_row
>
> ### ** Examples
... 44 lines ...
>
> # Change gradient color
> # Use repel = TRUE to avoid overplotting (slow if many points)
> fviz_ca_row(res.ca, col.row = "cos2", repel = TRUE) +
+ scale_color_gradient2(low = "white", mid = "#2E9FDF",
+ high = "#FC4E07", midpoint = 0.5, space = "Lab")+
+ theme_minimal()
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
** found \donttest examples: check also with --run-donttest
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘NbClust’
FAOSTAT (2.0)
Maintainer: Filippo Gheri filippo.gheri@fao.org
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Aggregation : foo: no visible global function definition for
‘weighted.mean’
Aggregation: no visible global function definition for ‘txtProgressBar’
Aggregation: no visible global function definition for
‘setTxtProgressBar’
constructSYB: no visible global function definition for ‘str’
fillCountryCode: no visible global function definition for ‘na.omit’
getFAO: no visible global function definition for ‘read.csv’
getWDImetaData: no visible global function definition for ‘write.csv’
getWDItoSYB: no visible global function definition for ‘na.omit’
lsgr: no visible global function definition for ‘na.omit’
lsgr: no visible global function definition for ‘coef’
lsgr: no visible global function definition for ‘lm’
Undefined global functions or variables:
coef lm na.omit read.csv setTxtProgressBar str txtProgressBar
weighted.mean write.csv
Consider adding
importFrom("stats", "coef", "lm", "na.omit", "weighted.mean")
importFrom("utils", "read.csv", "setTxtProgressBar", "str",
"txtProgressBar", "write.csv")
to your NAMESPACE file.
fbroc (0.4.0)
Maintainer: Erik Peter jerikpeter@googlemail.com
Bug reports: http://github.com/erikpeter/fbroc/issues
0 errors | 0 warnings | 0 notes
fermicatsR (1.4)
Maintainer: Pablo Saz Parkinson sazpark2@gmail.com
0 errors | 0 warnings | 0 notes
FField (0.1.0)
Maintainer: Grigori Kapoustin gregk@alphabetaworks.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘gridExtra’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
FFieldPtRepDemo: no visible global function definition for ‘ggplot’
FFieldPtRepDemo: no visible binding for global variable ‘mtcars’
FFieldPtRepDemo: no visible global function definition for ‘aes’
FFieldPtRepDemo: no visible binding for global variable ‘mpg’
FFieldPtRepDemo: no visible global function definition for ‘geom_point’
FFieldPtRepDemo: no visible global function definition for ‘geom_text’
FFieldPtRepDemo: no visible global function definition for ‘ggtitle’
FFieldPtRepDemo: no visible global function definition for
‘geom_segment’
FFieldPtRepDemo: no visible global function definition for
‘grid.arrange’
Undefined global functions or variables:
aes geom_point geom_segment geom_text ggplot ggtitle grid.arrange mpg
mtcars
Consider adding
importFrom("datasets", "mtcars")
to your NAMESPACE file.
Fgmutils (0.9.4)
Maintainer: Clayton Vieira Fraga Filho forestgrowthsoftware@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘Fgmutils’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Fgmutils.Rcheck/00install.out’ for details.
fheatmap (1.0.1)
Maintainer: Sivasish Sindirisentisci@gmail.com
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘fheatmap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Column Annotations
> ### Title: Annotations of columns in "fheatmap_data"
> ### Aliases: ' annotation_col '
> ### Keywords: annotation_col
>
> ### ** Examples
>
> data(annotation_col)
> fheatmap(fheatmap_data,annotation_col=annotation_col)
Error in theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(), :
formal argument "plot.margin" matched by multiple actual arguments
Calls: fheatmap -> draw_tree -> theme_blank -> theme
Execution halted
checking R code for possible problems ... NOTE
theme_blank: possible error in theme(panel.grid.major =
element_blank(), panel.grid.minor = element_blank(), panel.background
= element_blank(), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid =
element_blank(), panel.border = element_blank(), plot.margin =
rep(unit(0, "null"), 4), panel.margin = unit(0, "null"), plot.margin
= rep(unit(0, "null"), 4), legend.position = "none"): formal argument
"plot.margin" matched by multiple actual arguments
FinCal (0.6.3)
Maintainer: Felix Yanhui Fan nolanfyh@gmail.com
0 errors | 0 warnings | 0 notes
findviews (0.1.2)
Maintainer: Thibault Sellam thibault.sellam@cwi.nl
0 errors | 0 warnings | 0 notes
fishmove (0.3-3)
Maintainer: Johannes Radinger jradinger@igb-berlin.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
fishmove : coefs: no visible global function definition for ‘coef’
fishmove : coefs: no visible global function definition for ‘pf’
fishmove: no visible global function definition for ‘lm’
fishmove: no visible global function definition for ‘predict.lm’
fishmove.estimate: no visible global function definition for ‘quantile’
fishmove.estimate : ddoublenorm: no visible global function definition
for ‘dnorm’
fishmove.query: no visible global function definition for ‘hasArg’
fishmove.query : f: no visible global function definition for ‘pnorm’
fishmove.query: no visible global function definition for ‘uniroot’
pdk: no visible global function definition for ‘hasArg’
pdk : eq: no visible global function definition for ‘dnorm’
Undefined global functions or variables:
coef dnorm hasArg lm pf pnorm predict.lm quantile uniroot
Consider adding
importFrom("methods", "hasArg")
importFrom("stats", "coef", "dnorm", "lm", "pf", "pnorm", "predict.lm",
"quantile", "uniroot")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
fitbitScraper (0.1.7)
Maintainer: Cory Nissen corynissen@gmail.com
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 29-40 (fitbitScraper-examples.Rmd)
Error: processing vignette 'fitbitScraper-examples.Rmd' failed with diagnostics:
Value for option cookie (10022) must be length-1 string
Execution halted
fitcoach (1.0)
Maintainer: Niraj Juneja njuneja@gmail.com
0 errors | 0 warnings | 0 notes
flowr (0.9.10)
Maintainer: Sahil Seth me@sahilseth.com
Bug reports: https://github.com/sahilseth/flowr/issues
0 errors | 0 warnings | 0 notes
forcats (0.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/forcats/issues
0 errors | 0 warnings | 0 notes
forecast (7.3)
Maintainer: Rob Hyndman Rob.Hyndman@monash.edu
Bug reports: https://github.com/robjhyndman/forecast/issues
0 errors | 0 warnings | 0 notes
forestmodel (0.4.0)
Maintainer: Nick Kennedy r@nick-kennedy.com
0 errors | 0 warnings | 0 notes
fractional (0.1.3)
Maintainer: Bill Venables bill.venables@gmail.com
0 errors | 0 warnings | 0 notes
frailtySurv (1.2.2.1)
Maintainer: John V. Monaco vincent@vmonaco.com
Bug reports: https://github.com/vmonaco/frailtySurv/issues
0 errors | 0 warnings | 0 notes
FREddyPro (1.0)
Maintainer: Georgios Xenakis georgios.xenakis@forestry.gsi.gov.uk
0 errors | 0 warnings | 0 notes
freqparcoord (1.0.1)
Maintainer: Norm Matloff normmatloff@gmail.com
0 errors | 0 warnings | 0 notes
FreqProf (0.0.1)
Maintainer: Ronald E. Robertson rrobertson@aibrt.org
Bug reports: https://github.com/AIBRT/FreqProf/issues
0 errors | 0 warnings | 0 notes
freqweights (1.0.2)
Maintainer: Emilio Torres-Manzanera torres@uniovi.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.corfreq: no visible global function definition for ‘complete.cases’
.covfreq: no visible global function definition for ‘complete.cases’
.hclustvfreq: no visible global function definition for
‘complete.cases’
.quantilefreq : <anonymous>: no visible global function definition for
‘approx’
coef.biglmfreq: no visible global function definition for ‘coef’
predict.biglmfreq: no visible global function definition for ‘predict’
predict.lmfreq: no visible global function definition for ‘predict’
summary.lmfreq: no visible global function definition for ‘coef’
summary.lmfreq: no visible global function definition for ‘pt’
summary.lmfreq: no visible global function definition for ‘AIC’
update.biglmfreq: no visible global function definition for ‘update’
Undefined global functions or variables:
AIC approx coef complete.cases predict pt update
Consider adding
importFrom("stats", "AIC", "approx", "coef", "complete.cases",
"predict", "pt", "update")
to your NAMESPACE file.
frontiles (1.2)
Maintainer: Thibault Laurent thibault.laurent@univ-tlse1.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ROCscore: no visible global function definition for ‘par’
ROCscore: no visible global function definition for ‘axis’
ROCscore: no visible global function definition for ‘mtext’
ROCscore: no visible global function definition for ‘legend’
alphafrontier.2d: no visible global function definition for ‘par’
alphafrontier.2d: no visible global function definition for ‘polygon’
alphafrontier.2d: no visible global function definition for ‘lines’
alphafrontier.2d: no visible global function definition for ‘points’
alphafrontier.3d: no visible global function definition for ‘layout’
... 6 lines ...
ordermfrontier.2d: no visible global function definition for ‘polygon’
ordermfrontier.2d: no visible global function definition for ‘lines’
ordermfrontier.2d: no visible global function definition for ‘points’
ordermscore.boot: no visible global function definition for ‘sd’
Undefined global functions or variables:
axis barplot layout legend lines mtext na.omit par points polygon sd
Consider adding
importFrom("graphics", "axis", "barplot", "layout", "legend", "lines",
"mtext", "par", "points", "polygon")
importFrom("stats", "na.omit", "sd")
to your NAMESPACE file.
fSRM (0.6.4)
Maintainer: Felix Schönbrodt felix@nicebread.de
0 errors | 0 warnings | 0 notes
funModeling (1.4)
Maintainer: Pablo Casas pabloc@datascienceheroes.com
Bug reports: https://github.com/pablo14/funModeling/issues
1 error | 0 warnings | 0 notes
checking whether package ‘funModeling’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/funModeling.Rcheck/00install.out’ for details.
funrar (1.0.1)
Maintainer: Matthias Grenié matthias.grenie@gmail.com
Bug reports: https://github.com/Rekyt/funrar/issues
0 errors | 0 warnings | 0 notes
futureheatwaves (1.0.1)
Maintainer: Brooke Anderson brooke.anderson@colostate.edu
0 errors | 0 warnings | 0 notes
fuzzyforest (1.0.2)
Maintainer: Daniel Conn djconn17@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘fuzzyforest-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ff
> ### Title: Fits fuzzy forest algorithm.
> ### Aliases: ff
>
> ### ** Examples
... 9 lines ...
Attaching package: ‘fastcluster’
The following object is masked from ‘package:stats’:
hclust
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘GO.db’
Error: package or namespace load failed for ‘WGCNA’
Execution halted
** found \donttest examples: check also with --run-donttest
fuzzyjoin (0.1.2)
Maintainer: David Robinson drobinson@stackoverflow.com
0 errors | 0 warnings | 0 notes
G2Sd (2.1.5)
Maintainer: Regis K. Gallon reg.gallon@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘G2Sd’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/G2Sd.Rcheck/00install.out’ for details.
gapfill (0.9.3)
Maintainer: Florian Gerber florian.gerber@math.uzh.ch
2 errors | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘gapfill-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Image
> ### Title: Image Panels
> ### Aliases: Image
>
> ### ** Examples
>
> Image(ndvi)
Error in theme(line = element_blank(), strip.background = element_rect(fill = "white", :
formal argument "line" matched by multiple actual arguments
Calls: Image -> theme
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
4: theme(line = element_blank(), strip.background = element_rect(fill = "white", color = "white"),
strip.text.x = element_text(), strip.text.y = element_text(), axis.ticks = element_blank(),
axis.text.x = element_blank(), axis.text.y = element_blank(), axis.title.x = element_blank(),
axis.title.y = element_blank(), line = element_blank(), legend.position = "right",
panel.border = element_blank(), plot.margin = unit(c(1, 1, 1, 1), "mm"), panel.margin = unit(2,
"mm"))
testthat results ================================================================
OK: 859 SKIPPED: 0 FAILED: 1
1. Error: Image (@test-Image.R#5)
Error: testthat unit tests failed
Execution halted
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘doMPI’
checking R code for possible problems ... NOTE
Image: possible error in theme(line = element_blank(), strip.background
= element_rect(fill = "white", color = "white"), strip.text.x =
element_text(), strip.text.y = element_text(), axis.ticks =
element_blank(), axis.text.x = element_blank(), axis.text.y =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), line = element_blank(), legend.position = "right",
panel.border = element_blank(), plot.margin = unit(c(1, 1, 1, 1),
"mm"), panel.margin = unit(2, "mm")): formal argument "line" matched
by multiple actual arguments
gapmap (0.0.4)
Maintainer: Ryo Sakai ryo@vda-lab.be
0 errors | 0 warnings | 0 notes
gapminder (0.2.0)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca
Bug reports: https://github.com/jennybc/gapminder/issues
0 errors | 0 warnings | 0 notes
gcerisk (16.1.3)
Maintainer: Hanjie Shen shenhanjie0418@gmail.com
0 errors | 0 warnings | 0 notes
gcookbook (1.0)
Maintainer: Winston Chang winston@stdout.org
0 errors | 0 warnings | 0 notes
GDAdata (0.93)
Maintainer: Antony Unwinunwin@math.uni-augsburg.de
0 errors | 0 warnings | 0 notes
GenCAT (1.0.3)
Maintainer: Eric Reed reeder@bu.edu
1 error | 1 warning | 3 notes
checking examples ... ERROR
Running examples in ‘GenCAT-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GenCAT
> ### Title: Running GenCAT
> ### Aliases: GenCAT
> ### Keywords: ~kwd1 ~kwd2
>
... 15 lines ...
SNP effect_allele other_allele testStat chr position class
17232 rs9572807 C T -0.3014771 13 72423959 DACH1
24151 rs4389009 G A -1.4443860 13 99193519 STK24
37178 rs7151730 T A 0.1387317 14 33531585 NPAS3
58941 rs1076958 G A 2.0597766 14 91131857 TTC7B
13089 rs7987481 G A -1.0024210 13 47318950 LRCH1
58302 rs411064 G A 0.2132412 14 90008860 FOXN3
>
> library(snpStats)
Error in library(snpStats) : there is no package called ‘snpStats’
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: dplyr
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Loading required package: ggplot2
Quitting from lines 62-69 (GenCAT-vignette.Rmd)
Error: processing vignette 'GenCAT-vignette.Rmd' failed with diagnostics:
unable to find required package 'snpStats'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘snpStats’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘snpStats’
checking data for non-ASCII characters ... NOTE
Error in .requirePackage(package) :
unable to find required package 'snpStats'
Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
Execution halted
gender (0.5.1)
Maintainer: Lincoln Mullen lincoln@lincolnmullen.com
Bug reports: https://github.com/ropensci/gender/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘genderdata’
geneSLOPE (0.37.0)
Maintainer: Piotr Sobczyk piotr.sobczyk@pwr.edu.pl
Bug reports: https://github.com/psobczyk/geneSLOPE/issues
0 errors | 0 warnings | 0 notes
genomeplot (1.0)
Maintainer: Jing Xuxujingaddressee@foxmail.com
0 errors | 0 warnings | 0 notes
geoknife (1.4.0)
Maintainer: Jordan Read jread@usgs.gov
Bug reports: https://github.com/USGS-R/geoknife/issues
0 errors | 0 warnings | 0 notes
geomnet (0.1.2.1)
Maintainer: Samantha Tyner sctyner@iastate.edu
Bug reports: https://github.com/sctyner/geomnet/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘geomnet-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: football
> ### Title: College football games network (undirected)
> ### Aliases: football
> ### Keywords: datasets
>
... 23 lines ...
+ layout = 'fruchtermanreingold'
+ ) +
+ theme_net() +
+ theme(legend.position = "bottom") +
+ scale_colour_brewer("Conference", palette = "Paired") +
+ guides(linetype = FALSE)
Warning: Ignoring unknown aesthetics: label
Error in get(name, envir = asNamespace(pkg), inherits = FALSE) :
object 'panel_scales' not found
Calls: <Anonymous> ... f -> <Anonymous> -> f -> <Anonymous> -> f -> ::: -> get
Execution halted
GERGM (0.10.0)
Maintainer: Matthew J. Denny mdenny@psu.edu
0 errors | 0 warnings | 0 notes
GetHFData (1.2.0)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
GetTDData (1.2.4)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
gettingtothebottom (3.2)
Maintainer: Jocelyn T. Chi jocelynchi@alum.berkeley.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
example.alpha: no visible global function definition for ‘rnorm’
example.quadratic.approx: no visible global function definition for
‘rnorm’
generate_nnm: no visible global function definition for ‘rnorm’
generate_nnm: no visible global function definition for ‘rgamma’
generate_nnm: no visible global function definition for ‘dnorm’
plot_nnm: no visible global function definition for ‘stack’
testmatrix: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
dnorm rgamma rnorm stack
Consider adding
importFrom("stats", "dnorm", "rgamma", "rnorm")
importFrom("utils", "stack")
to your NAMESPACE file.
gfcanalysis (1.4)
Maintainer: Alex Zvoleff azvoleff@conservation.org
Bug reports: https://github.com/azvoleff/gfcanalysis/issues
0 errors | 0 warnings | 0 notes
GGally (1.2.0)
Maintainer: Barret Schloerke schloerke@gmail.com
Bug reports: https://github.com/ggobi/ggally/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘GGally-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: +.gg
> ### Title: Modify a ggmatrix object by adding an ggplot2 object to all
> ### plots
> ### Aliases: +.gg
>
> ### ** Examples
>
> data(tips, package = "reshape")
> pm <- ggpairs(tips[, 2:3])
> ## change to black and white theme
> pm + ggplot2::theme_bw()
Warning: `panel.margin` is deprecated. Please use `panel.spacing` property instead
Error in FUN(X[[i]], ...) :
only defined on a data frame with all numeric variables
Calls: <Anonymous> ... [ -> [.gtable -> Summary.data.frame -> lapply -> FUN
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Failure: stops (@test-ggmatrix_getput.R#23)
2. Failure: stops (@test-ggmatrix_getput.R#23)
3. Failure: stops (@test-ggmatrix_getput.R#23)
4. Failure: stops (@test-ggmatrix_getput.R#23)
5. Failure: stops (@test-ggmatrix_getput.R#23)
6. Failure: stops (@test-ggmatrix_getput.R#23)
7. Error: order (@test-ggparcoord.R#222)
8. Error: axisLabels (@test-zzz_ggpairs.R#350)
9. Error: strips and axis (@test-zzz_ggpairs.R#373)
10. Error: subtypes (@test-zzz_ggpairs.R#614)
Error: testthat unit tests failed
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
ggalt (0.1.1)
Maintainer: Bob Rudis bob@rudis.net
Bug reports: https://github.com/hrbrmstr/ggalt/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘ggalt-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coord_proj
> ### Title: Similar to 'coord_map' but uses the PROJ.4 library/package for
> ### projection transformation
> ### Aliases: coord_proj
>
... 7 lines ...
>
> gg <- ggplot()
> gg <- gg + geom_map(data=world, map=world,
+ aes(x=long, y=lat, map_id=region))
Warning: Ignoring unknown aesthetics: x, y
> gg <- gg + coord_proj("+proj=wintri")
> gg
Error in gPathFromVector(names) :
a 'grob' path must contain at least one 'grob' name
Calls: <Anonymous> ... valid.data -> recycle.data -> gPath -> gPathFromVector
Execution halted
ggbeeswarm (0.5.0)
Maintainer: Erik Clarke erikclarke@gmail.com
0 errors | 0 warnings | 0 notes
ggcorrplot (0.1.1)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com
Bug reports: https://github.com/kassambara/ggcorrplot/issues
0 errors | 0 warnings | 0 notes
ggdendro (0.1-20)
Maintainer: Andrie de Vries apdevries@gmail.com
Bug reports: https://github.com/andrie/ggdendro/issues
0 errors | 0 warnings | 0 notes
ggdmc (0.1.3.5)
Maintainer: Yi-Shin Lin yishin.lin@utas.edu.au
Bug reports: https://github.com/TasCL/ggdmc/issues
0 errors | 0 warnings | 0 notes
ggenealogy (0.2.0)
Maintainer: Lindsay Rutter lrutter@iastate.edu
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
conversion failure on 'Barbara Choroś-Tomczyk' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Barbara Choroś-Tomczyk' in 'mbcsToSbcs': dot substituted for <9b>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Ondřej Chochola' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Ondřej Chochola' in 'mbcsToSbcs': dot substituted for <99>
... 8 lines ...
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <8c>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <88>
Error: processing vignette 'ggenealogy.Rnw' failed with diagnostics:
chunk 57 (label = plotAnimate)
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Execution halted
ggExtra (0.5)
Maintainer: Dean Attali daattali@gmail.com
Bug reports: https://github.com/daattali/ggExtra/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggExtra-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ggMarginal
> ### Title: Add marginal density/histogram to ggplot2 scatterplots
> ### Aliases: ggMarginal
>
> ### ** Examples
>
>
> # basic usage
> p <- ggplot2::ggplot(mtcars, ggplot2::aes(wt, mpg)) + ggplot2::geom_point()
> ggMarginal(p)
Warning in mean.default(getLimits(pbTop, "y")) :
argument is not numeric or logical: returning NA
Error: Don't know how to add o to a plot
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 94-95 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Don't know how to add o to a plot
Execution halted
ggfortify (0.2.0)
Maintainer: Masaaki Horikoshi sinhrks@gmail.com
1 error | 0 warnings | 1 note
checking tests ... ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
testthat results ================================================================
OK: 1072 SKIPPED: 4 FAILED: 7
1. Failure: fortify.bats works for austres (@test-forecast.R#96)
2. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#180)
3. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#181)
4. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#182)
5. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#189)
6. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#190)
7. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#191)
Error: testthat unit tests failed
Execution halted
checking installed package size ... NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
doc 4.9Mb
ggghost (0.2.1)
Maintainer: Jonathan Carroll rpkg@jcarroll.com.au
Bug reports: https://github.com/jonocarroll/ggghost/issues
0 errors | 0 warnings | 0 notes
ggiraph (0.3.2)
Maintainer: David Gohel david.gohel@ardata.fr
Bug reports: https://github.com/davidgohel/ggiraph/issues
0 errors | 0 warnings | 0 notes
gglogo (0.1.2)
Maintainer: Eric Hare erichare@iastate.edu
Bug reports: https://github.com/heike/gglogo/issues
0 errors | 0 warnings | 0 notes
ggloop (0.1.0)
Maintainer: Luke Smith luke@protocolvital.info
Bug reports: https://github.com/seasmith/ggloop/issues
0 errors | 0 warnings | 0 notes
ggmap (2.6.1)
Maintainer: David Kahle david.kahle@gmail.com
Bug reports: https://github.com/dkahle/ggmap/issues
0 errors | 0 warnings | 0 notes
ggmcmc (1.1)
Maintainer: Xavier Fernández i Marín xavier.fim@gmail.com
Bug reports: https://github.com/xfim/ggmcmc/issues
0 errors | 0 warnings | 0 notes
ggnetwork (0.5.1)
Maintainer: Francois Briatte f.briatte@gmail.com
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggnetwork-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_edgetext_repel
> ### Title: Draw repulsive edge labels.
> ### Aliases: geom_edgelabel_repel geom_edgetext_repel
>
> ### ** Examples
... 41 lines ...
Loading required package: sna
Loading required package: statnet.common
sna: Tools for Social Network Analysis
Version 2.4 created on 2016-07-23.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
For citation information, type citation("sna").
Type help(package="sna") to get started.
Error: GeomLabelRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
7: fetch_ggproto(x, name) at /Users/hadley/Documents/ggplot/ggplot2/R/ggproto.r:135
8: stop(class(x)[[1]], " was built with an incompatible version of ggproto.\n", "Please reinstall the package that provides this extension.",
call. = FALSE) at /Users/hadley/Documents/ggplot/ggplot2/R/ggproto.r:122
testthat results ================================================================
OK: 11 SKIPPED: 0 FAILED: 4
1. Error: geom_nodetext_repel works (@test-geoms.R#34)
2. Error: geom_nodelabel_repel works (@test-geoms.R#58)
3. Error: geom_edgetext_repel works (@test-geoms.R#101)
4. Error: geom_edgelabel_repel works (@test-geoms.R#108)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
network: Classes for Relational Data
Version 1.13.0 created on 2015-08-31.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
Mark S. Handcock, University of California -- Los Angeles
David R. Hunter, Penn State University
Martina Morris, University of Washington
Skye Bender-deMoll, University of Washington
For citation information, type citation("network").
Type help("network-package") to get started.
Loading required package: statnet.common
sna: Tools for Social Network Analysis
Version 2.4 created on 2016-07-23.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
For citation information, type citation("sna").
Type help(package="sna") to get started.
Quitting from lines 199-205 (ggnetwork.Rmd)
Error: processing vignette 'ggnetwork.Rmd' failed with diagnostics:
GeomLabelRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggparallel (0.1.2)
Maintainer: Heike Hofmann hofmann@iastate.edu
0 errors | 0 warnings | 0 notes
ggpmisc (0.2.12)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/ggpmisc/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggpmisc-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: stat_dens2d_filter
> ### Title: Filter observations in high density regions.
> ### Aliases: stat_dens2d_filter stat_dens2d_filter_g
>
> ### ** Examples
... 39 lines ...
>
> ggplot(data = d, aes(x, y, label = lab, color = group)) +
+ geom_point() +
+ stat_dens2d_filter(geom = "text")
>
> ggplot(data = d, aes(x, y, label = lab, color = group)) +
+ geom_point() +
+ stat_dens2d_filter(geom = "text_repel")
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 680-683 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggpolypath (0.1.0)
Maintainer: Michael D. Sumner mdsumner@gmail.com
Bug reports: https://github.com/mdsumner/ggpolypath/issues
0 errors | 0 warnings | 0 notes
ggpubr (0.1.0)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com
Bug reports: https://github.com/kassambara/ggpubr/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘ggpubr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: diff_express
> ### Title: Differential gene expression analysis results
> ### Aliases: diff_express
>
> ### ** Examples
... 6 lines ...
+ fdr = 0.05, fc = 2, size = 0.4,
+ palette = c("#B31B21", "#1465AC", "darkgray"),
+ genenames = as.vector(diff_express$name),
+ legend = "top", top = 20,
+ font.label = c("bold", 11),
+ font.legend = "bold",
+ font.main = "bold",
+ ggtheme = ggplot2::theme_minimal())
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggRandomForests (2.0.1)
Maintainer: John Ehrlinger john.ehrlinger@gmail.com
Bug reports: https://github.com/ehrlinger/ggRandomForests/issues
0 errors | 0 warnings | 0 notes
ggraptR (0.1)
Maintainer: Eugene Dubossarsky eugene@presciient.com
Bug reports: https://github.com/cargomoose/raptR/issues
0 errors | 0 warnings | 0 notes
ggrepel (0.6.3)
Maintainer: Kamil Slowikowski kslowikowski@fas.harvard.edu
Bug reports: http://github.com/slowkow/ggrepel/issues
0 errors | 0 warnings | 0 notes
ggROC (1.0)
Maintainer: Honglong Wu wuhonglong.china@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
‘ggplot2’
A package should be listed in only one of these fields.
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
ggroc: no visible global function definition for ‘ggplot’
ggroc: no visible global function definition for ‘aes’
ggroc: no visible global function definition for ‘geom_point’
ggroc: no visible global function definition for ‘geom_line’
ggroc: no visible global function definition for ‘theme’
ggroc: no visible global function definition for ‘element_text’
ggroc: no visible global function definition for ‘labs’
ggroc: no visible global function definition for ‘ggsave’
Undefined global functions or variables:
aes element_text geom_line geom_point ggplot ggsave labs theme
ggsci (1.5)
Maintainer: Nan Xiao me@nanx.me
Bug reports: https://github.com/road2stat/ggsci/issues
0 errors | 0 warnings | 0 notes
ggseas (0.5.1)
Maintainer: Peter Ellis peter.ellis2013nz@gmail.com
Bug reports: https://github.com/ellisp/ggseas/issues
0 errors | 0 warnings | 0 notes
ggsn (0.3.1)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
ggspectra (0.1.10)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/ggspectra
0 errors | 0 warnings | 0 notes
ggswissmaps (0.1.1)
Maintainer: Sandro Petrillo Burri gibo.gaf@gmail.com
0 errors | 0 warnings | 0 notes
ggtern (2.1.4)
Maintainer: Nicholas Hamilton nick@ggtern.com
1 error | 0 warnings | 0 notes
checking whether package ‘ggtern’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ggtern.Rcheck/00install.out’ for details.
ggThemeAssist (0.1.5)
Maintainer: Calli Gross ggthemeassist@icloud.com
0 errors | 0 warnings | 0 notes
ggthemes (3.2.0)
Maintainer: Jeffrey B. Arnold jeffrey.arnold@gmail.com
Bug reports: http://github.com/jrnold/ggthemes
0 errors | 0 warnings | 0 notes
githubinstall (0.1.0)
Maintainer: Koji Makiyama hoxo.smile@gmail.com
Bug reports: https://github.com/hoxo-m/githubinstall/issues
0 errors | 0 warnings | 0 notes
gitter (1.1.1)
Maintainer: Omar Wagih wagih@ebi.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘EBImage’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
glinternet (1.0.0)
Maintainer: Michael Lim michael626@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
extract_effects : extract_interaction : <anonymous>: no visible global
function definition for ‘lm’
extract_effects : extract_main_effect : <anonymous>: no visible global
function definition for ‘lm’
glinternet.cv: no visible global function definition for ‘predict’
glinternet.cv: no visible binding for global variable ‘sd’
plot.glinternet.cv: no visible global function definition for ‘plot’
plot.glinternet.cv: no visible global function definition for
‘segments’
plot.glinternet.cv: no visible global function definition for ‘abline’
plot.glinternet.cv: no visible global function definition for ‘axis’
predict.glinternet.cv: no visible global function definition for
‘predict’
Undefined global functions or variables:
abline axis lm plot predict sd segments
Consider adding
importFrom("graphics", "abline", "axis", "plot", "segments")
importFrom("stats", "lm", "predict", "sd")
to your NAMESPACE file.
glycanr (0.3.0)
Maintainer: Ivo Ugrina ivo@iugrina.com
Bug reports: https://github.com/iugrina/glycanr/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘glycanr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: quantilenorm
> ### Title: Quantile Normalization of glycan data
> ### Aliases: quantilenorm
>
> ### ** Examples
>
> data(mpiu)
> mpiun <- quantilenorm(mpiu)
Error in quantilenorm(mpiu) :
Unable to proceed since package preprocessCore from
BioConductor is not available on this system. This
package is a prerequisite to use the quantilenorm function!
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Error in quantilenorm(mpiu, transpose = TRUE) :
Unable to proceed since package preprocessCore from
BioConductor is not available on this system. This
package is a prerequisite to use the quantilenorm function!
Calls: test_check ... force -> source_file -> eval -> eval -> quantilenorm
testthat results ================================================================
OK: 5 SKIPPED: 0 FAILED: 0
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘preprocessCore’
gmum.r (0.2.1)
Maintainer: Stanislaw Jastrzebski staszek.jastrzebski@gmail.com
Bug reports: https://github.com/gmum/gmum.r/issues
0 errors | 0 warnings | 0 notes
gmwm (2.0.0)
Maintainer: Stephane Guerrier stephane@illinois.edu
Bug reports: https://github.com/SMAC-Group/gmwm/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘imudata’
gogamer (0.4.3)
Maintainer: Kota Mori kmori05@gmail.com
Bug reports: https://github.com/kota7/gogamer/issues
0 errors | 0 warnings | 0 notes
googlesheets (0.2.1)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca
Bug reports: https://github.com/jennybc/googlesheets/issues
0 errors | 0 warnings | 0 notes
GOplot (1.0.2)
Maintainer: Wencke Walter wencke.walter@arcor.de
Bug reports: https://github.com/wencke/wencke.github.io/issues
0 errors | 0 warnings | 0 notes
gpmap (0.1.1)
Maintainer: Arne B. Gjuvsland arne.gjuvsland@nmbu.no
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Checking should be performed on sources prepared by ‘R CMD build’.
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘foreach’ ‘ggplot2’ ‘isotone’ ‘plyr’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
decompose_monotone: no visible global function definition for ‘%dopar%’
decompose_monotone: no visible global function definition for ‘foreach’
decompose_monotone: no visible global function definition for ‘%do%’
decompose_monotone_single: no visible global function definition for
‘%dopar%’
decompose_monotone_single: no visible global function definition for
‘foreach’
decompose_monotone_single: no visible global function definition for
‘laply’
... 50 lines ...
plot3_orig: no visible global function definition for ‘aes_string’
plot3_orig: no visible global function definition for ‘geom_line’
plot3_orig: no visible global function definition for ‘facet_wrap’
plot3_orig: no visible global function definition for ‘as.formula’
plot3_orig: no visible global function definition for ‘labs’
Undefined global functions or variables:
%do% %dopar% aaply activeSet aes_string as.formula facet_grid
facet_wrap foreach geom_line geom_point ggplot labs laply var
Consider adding
importFrom("stats", "as.formula", "var")
to your NAMESPACE file.
granovaGG (1.4.0)
Maintainer: Brian A. Danielak brian@briandk.com
0 errors | 0 warnings | 0 notes
Greg (1.2)
Maintainer: Max Gordon max@gforge.se
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘Greg-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: simpleRmsAnova
> ### Title: A simpler latex output of the latex.anova.rms
> ### Aliases: print.simpleRmsAnova simpleRmsAnova
> ### Keywords: internal
>
> ### ** Examples
>
> # ** Borrowed code from the lrm example **
>
> #Fit a logistic model containing predictors age, blood.pressure, sex
> #and cholesterol, with age fitted with a smooth 5-knot restricted cubic
> #spline function and a different shape of the age relationship for males
> #and females.
>
> library(rms)
Loading required package: Hmisc
Loading required package: lattice
Error: package ‘survival’ 2.39.5 was found, but >= 2.40.1 is required by ‘Hmisc’
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
2: .getRequiredPackages2(pkgInfo, quietly = quietly)
3: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc, quietly = quietly)
4: .getRequiredPackages2(pkgInfo, quietly = quietly)
5: stop(gettextf(msg, sQuote(pkg), current, dep$op, target, sQuote(pkgname)), call. = FALSE,
domain = NA)
Error: package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
testthat results ================================================================
OK: 12 SKIPPED: 0 FAILED: 1
1. Error: That rms-functions work (@test-addNonlinearity.R#108)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: forestplot
Loading required package: grid
Loading required package: magrittr
Loading required package: Gmisc
Loading required package: Rcpp
Loading required package: htmlTable
Loading required package: lattice
Quitting from lines 56-65 (Print_crude_and_adjusted_models.Rmd)
Error: processing vignette 'Print_crude_and_adjusted_models.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
greport (0.7-1)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking whether package ‘greport’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/greport.Rcheck/00install.out’ for details.
gridDebug (0.5-0)
Maintainer: Paul Murrell p.murrell@auckland.ac.nz
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘graph’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
gridExtra (2.2.1)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 0 notes
gridsampler (0.5)
Maintainer: Mark Heckmann heckmann.mark@gmail.com
Bug reports: https://github.com/markheckmann/gridsampler/issues
0 errors | 0 warnings | 0 notes
growcurves (0.2.4.0)
Maintainer: Terrance Savitsky tds151@gmail.com
0 errors | 0 warnings | 0 notes
growfunctions (0.13)
Maintainer: Terrance Savitsky tds151@gmail.com
0 errors | 0 warnings | 0 notes
growthcurver (0.2.1)
Maintainer: Kathleen sprouffske sprouffske@gmail.com
Bug reports: https://github.com/sprouffske/growthcurver/issues
0 errors | 0 warnings | 0 notes
gsDesign (3.0-1)
Maintainer: Keaven Anderson keaven_anderson@merck.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
plotgsCP: no visible global function definition for ‘opts’
plotgsPower: no visible global function definition for ‘opts’
qplotit: no visible global function definition for ‘opts’
Undefined global functions or variables:
opts
GSE (4.0)
Maintainer: Andy Leung andy.leung@stat.ubc.ca
0 errors | 0 warnings | 0 notes
gtrendsR (1.3.5)
Maintainer: Philippe Massicotte pmassicotte@hotmail.com
Bug reports: https://github.com/PMassicotte/gtrendsR/issues
0 errors | 0 warnings | 0 notes
gunsales (0.1.1)
Maintainer: Dirk Eddelbuettel edd@debian.org
0 errors | 0 warnings | 0 notes
gutenbergr (0.1.2)
Maintainer: David Robinson admiral.david@gmail.com
Bug reports: http://github.com/ropenscilabs/gutenbergr/issues
0 errors | 0 warnings | 0 notes
gwdegree (0.1.1)
Maintainer: Michael Levy malevy@ucdavis.edu
Bug reports: https://github.com/michaellevy/gwdegree/issues
0 errors | 0 warnings | 0 notes
gWQS (1.0.0)
Maintainer: Stefano Renzetti stefano.renzetti88@gmail.com
0 errors | 0 warnings | 0 notes
h2o (3.10.0.8)
Maintainer: Tom Kraljevic tomk@0xdata.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 63.6Mb
sub-directories of 1Mb or more:
java 62.4Mb
hazus (0.1)
Maintainer: Gopi Goteti my.ration.shop@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
extract_hazus_functions: no visible global function definition for
‘data’
Undefined global functions or variables:
data
Consider adding
importFrom("utils", "data")
to your NAMESPACE file.
hBayesDM (0.2.3.1)
Maintainer: Woo-Young Ahn ahn.280@osu.edu
0 errors | 0 warnings | 0 notes
hdm (0.2.0)
Maintainer: Martin Spindler spindler@mea.mpisoc.mpg.de
0 errors | 0 warnings | 0 notes
hdnom (4.2)
Maintainer: Nan Xiao me@nanx.me
Bug reports: https://github.com/road2stat/hdnom/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘hdnom-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hdcox.aenet
> ### Title: Adaptive Elastic-Net Model Selection for High-Dimensional Cox
> ### Models
> ### Aliases: hdcox.aenet
>
> ### ** Examples
>
> library("survival")
> library("rms")
Loading required package: Hmisc
Loading required package: lattice
Error: package ‘survival’ 2.39.5 is loaded, but >= 2.40.1 is required by ‘Hmisc’
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 135-144 (hdnom.Rmd)
Error: processing vignette 'hdnom.Rmd' failed with diagnostics:
package 'survival' 2.39.5 is loaded, but >= 2.40.1 is required by 'Hmisc'
Execution halted
hdr (0.1)
Maintainer: Eric Persson expersso5@gmail.com
Bug reports: https://github.com/expersso/hdr
0 errors | 0 warnings | 0 notes
heatmaply (0.6.0)
Maintainer: Tal Galili tal.galili@gmail.com
Bug reports: https://github.com/talgalili/heatmaply/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘heatmaply-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: heatmapr
> ### Title: Creates a heatmapr object
> ### Aliases: heatmapr
>
> ### ** Examples
>
> library(heatmaply)
> hm <- heatmapr(mtcars, scale = "column", colors = "Blues")
> heatmaply(hm)
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: heatmaply ... heatmaply.heatmapr -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
The following object is masked from 'package:stats':
filter
The following object is masked from 'package:graphics':
layout
... 8 lines ...
Suggestions and bug-reports can be submitted at: https://github.com/talgalili/heatmaply/issues
Or contact: <tal.galili@gmail.com>
To suppress this message use: suppressPackageStartupMessages(library(heatmaply))
---------------------
Quitting from lines 83-85 (heatmaply.Rmd)
Error: processing vignette 'heatmaply.Rmd' failed with diagnostics:
attempt to apply non-function
Execution halted
heemod (0.5.1)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com
Bug reports: https://github.com/pierucci/heemod/issues
0 errors | 0 warnings | 0 notes
heuristica (1.0.1)
Maintainer: Jean Whitmore jeanimal@gmail.com
Bug reports: https://github.com/jeanimal/heuristica/issues
0 errors | 0 warnings | 0 notes
hierarchicalDS (2.9)
Maintainer: Paul B Conn paul.conn@noaa.gov
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
calc_linex_a: no visible global function definition for ‘optimize’
generate_inits: no visible global function definition for ‘rnorm’
generate_inits: no visible global function definition for ‘runif’
generate_inits: no visible global function definition for ‘rpois’
generate_inits_misID: no visible global function definition for ‘runif’
generate_inits_misID: no visible global function definition for ‘rnorm’
generate_inits_misID: no visible global function definition for ‘rpois’
get_confusion_array: no visible global function definition for
‘model.matrix’
... 34 lines ...
table.mcmc: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
abline dnorm dpois legend median model.matrix optimize par plot pnorm
points rgamma rnorm rpois runif var write.csv
Consider adding
importFrom("graphics", "abline", "legend", "par", "plot", "points")
importFrom("stats", "dnorm", "dpois", "median", "model.matrix",
"optimize", "pnorm", "rgamma", "rnorm", "rpois", "runif",
"var")
importFrom("utils", "write.csv")
to your NAMESPACE file.
hierarchicalSets (1.0.2)
Maintainer: Thomas Lin Pedersen thomasp85@gmail.com
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
‘ggplot2:::build_guides’ ‘ggplot2:::guide_axis’
‘ggplot2:::scales_list’
See the note in ?`:::` about the use of this operator.
highcharter (0.4.0)
Maintainer: Joshua Kunst jbkunst@gmail.com
Bug reports: https://github.com/jbkunst/highcharter/issues
0 errors | 0 warnings | 0 notes
HighDimOut (1.0.0)
Maintainer: Cheng Fan raja8885@hotmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Func.ABOD: no visible global function definition for ‘combn’
Func.ABOD: no visible global function definition for ‘var’
Func.SOD: no visible global function definition for ‘var’
Func.trans : erf: no visible global function definition for ‘pnorm’
Func.trans: no visible global function definition for ‘sd’
Undefined global functions or variables:
combn pnorm sd var
Consider adding
importFrom("stats", "pnorm", "sd", "var")
importFrom("utils", "combn")
to your NAMESPACE file.
HistData (0.7-8)
Maintainer: Michael Friendly friendly@yorku.ca
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Guerry’, ‘alr3’, ‘agridat’
HistDAWass (0.1.4)
Maintainer: Antonio Irpino antonio.irpino@unina2.it
0 errors | 0 warnings | 0 notes
historydata (0.1)
Maintainer: Lincoln Mullen lincoln@lincolnmullen.com
Bug reports: https://github.com/ropensci/historydata/issues
0 errors | 0 warnings | 0 notes
HiveR (0.2.55)
Maintainer: Bryan A. Hanson hanson@depauw.edu
Bug reports: https://github.com/bryanhanson/HiveR/issues
0 errors | 0 warnings | 0 notes
HLMdiag (0.3.1)
Maintainer: Adam Loy loyad01@gmail.com
Bug reports: https://github.com/aloy/HLMdiag/issues
0 errors | 0 warnings | 0 notes
Hmisc (4.0-0)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
HRM (0.3.5)
Maintainer: Martin Happ martin.happ@aon.at
0 errors | 0 warnings | 0 notes
HTSSIP (1.0.3)
Maintainer: Nicholas Youngblut nyoungb2@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘DESeq2’ ‘phyloseq’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
httk (1.4)
Maintainer: John Wambaugh wambaugh.john@epa.gov
0 errors | 0 warnings | 0 notes
HWxtest (1.1.7)
Maintainer: Bill Engels wrengels@wisc.edu
0 errors | 0 warnings | 0 notes
hybridModels (0.2.6)
Maintainer: Fernando S. Marques fernandosix@gmail.com
Bug reports: https://github.com/fernandosm/hybridModels/issues
0 errors | 0 warnings | 0 notes
hyfo (1.3.6)
Maintainer: Yuanchao Xu xuyuanchao37@gmail.com
Bug reports: https://github.com/Yuanchao-Xu/hyfo/issues
0 errors | 0 warnings | 0 notes
hyperSpec (0.98-20150304)
Maintainer: Claudia Beleites chemometrie@beleites.de
1 error | 1 warning | 1 note
checking examples ... ERROR
Running examples in ‘hyperSpec-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qplotspc
> ### Title: Spectra plotting with ggplot2
> ### Aliases: qplotspc
>
> ### ** Examples
>
> qplotspc (chondro)
Warning in qplotspc(chondro) :
Number of spectra exceeds spc.nmax. Only the first 10 are plotted.
> qplotspc (paracetamol, c (2800 ~ max, min ~ 1800)) + scale_x_reverse (breaks = seq (0, 3200, 400))
Error in gtable_add_grob(panel_table, strips$x$top, 2, panel_pos_col$l, :
Not all inputs have either length 1 or same length same as 'grobs'
Calls: <Anonymous> ... <Anonymous> -> f -> <Anonymous> -> f -> gtable_add_grob
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in plotc(x, ...) : Intensity at first wavelengh only is used.
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'x' values are not equispaced; output may be wrong
Warning in hyperSpec:::.levelplot(x, data, ...) :
Only first wavelength is used for plotting
Loading required package: latticeExtra
Loading required package: RColorBrewer
... 8 lines ...
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'x' values are not equispaced; output may be wrong
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'y' values are not equispaced; output may be wrong
Warning: Ignoring unknown aesthetics: y
Error: processing vignette 'plotting.Rnw' failed with diagnostics:
chunk 77 (label = ggplot2-do)
Error in gtable_add_grob(panel_table, strips$x$top, 2, panel_pos_col$l, :
Not all inputs have either length 1 or same length same as 'grobs'
Execution halted
checking R code for possible problems ... NOTE
Warning: local assignments to syntactic functions: ~
Warning: local assignments to syntactic functions: ~
.cut.ticks: no visible global function definition for ‘head’
.jdx.TABULAR.PAC: no visible global function definition for ‘head’
.jdx.hdr.concentrations: no visible global function definition for
‘modifyList’
.jdx.readhdr: no visible global function definition for ‘maintainer’
.labels: no visible global function definition for ‘modifyList’
.levelplot: no visible global function definition for ‘modifyList’
... 56 lines ...
‘modifyList’
plot,hyperSpec-character: no visible global function definition for
‘modifyList’
Undefined global functions or variables:
chull col2rgb colorRampPalette head maintainer modifyList read.table
relist rgb str tail unstack write.table
Consider adding
importFrom("grDevices", "chull", "col2rgb", "colorRampPalette", "rgb")
importFrom("utils", "head", "maintainer", "modifyList", "read.table",
"relist", "str", "tail", "unstack", "write.table")
to your NAMESPACE file.
IAPWS95 (1.0.0)
Maintainer: Benedito Baptista bene46@msn.com
1 error | 0 warnings | 0 notes
checking whether package ‘IAPWS95’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/IAPWS95.Rcheck/00install.out’ for details.
IAT (0.3)
Maintainer: Dan Martin dpmartin42@gmail.com
0 errors | 0 warnings | 0 notes
ibmdbR (1.48.0)
Maintainer: Alexander Eckert inza@de.ibm.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RODBC’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
icarus (0.2.2)
Maintainer: Antoine Rebecq antoine.rebecq@m4x.org
0 errors | 0 warnings | 0 notes
icd9 (1.3.1)
Maintainer: Jack O. Wasey jack@jackwasey.com
Bug reports: https://github.com/jackwasey/icd9/issues
0 errors | 0 warnings | 0 notes
idm (1.7.1)
Maintainer: Angelos Markos amarkos@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘idm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: i_mca
> ### Title: Incremental Multiple Correspondence Analysis (MCA)
> ### Aliases: i_mca
>
> ### ** Examples
>
> ##Example 1 - Exact case
> data("women", package = "idm")
> nc = 5 # number of chunks
> res_iMCAh = i_mca(data1 = women[1:300,1:7], data2 = women[301:2107,1:7]
+ ,method = "exact", nchunk = nc)
> #static MCA plot of attributes on axes 2 and 3
> plot(x = res_iMCAh, dim = c(2,3), what = c(FALSE,TRUE), animation = FALSE)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
** found \donttest examples: check also with --run-donttest
ie2miscdata (1.0.1)
Maintainer: Irucka Embry iembry@usgs.gov
Bug reports: https://github.com/iembry-USGS/ie2miscdata/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Error in (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE, :
there is no package called 'states2k'
Quitting from lines 24-109 (US-Engineering-Weather-Map.Rmd)
Error: processing vignette 'US-Engineering-Weather-Map.Rmd' failed with diagnostics:
object 'states2k_map' not found
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘states2k’
ifaTools (0.13)
Maintainer: Joshua N. Pritikin jpritikin@pobox.com
0 errors | 0 warnings | 0 notes
IGM.MEA (0.3.4)
Maintainer: Sahar Gelfman sg3261@columbia.edu
0 errors | 0 warnings | 0 notes
imageData (0.1-26)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
1 error | 0 warnings | 0 notes
checking whether package ‘imageData’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/imageData.Rcheck/00install.out’ for details.
imager (0.31)
Maintainer: Simon Barthelme simon.barthelme@gipsa-lab.fr
Bug reports: https://github.com/dahtah/imager/issues
0 errors | 1 warning | 1 note
checking whether package ‘imager’ can be installed ... WARNING
Found the following significant warnings:
../inst/include/CImg.h:13559:29: warning: multiple unsequenced modifications to 'ptrs' [-Wunsequenced]
../inst/include/CImg.h:13738:19: warning: multiple unsequenced modifications to 'ptrs' [-Wunsequenced]
../inst/include/CImg.h:22316:23: warning: unsequenced modification and access to 'right' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: unsequenced modification and access to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: multiple unsequenced modifications to '_n3x' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:29415:40: warning: unsequenced modification and access to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:29415:40: warning: multiple unsequenced modifications to '_n3x' [-Wunsequenced]
... 9 lines ...
../inst/include/CImg.h:29478:40: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:30531:19: warning: unsequenced modification and access to 'right' [-Wunsequenced]
../inst/include/CImg.h:31964:17: warning: multiple unsequenced modifications to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:31964:17: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:44923:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:44931:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:44941:22: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45125:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45133:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45142:20: warning: unsequenced modification and access to 'err' [-Wunsequenced]
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/imager.Rcheck/00install.out’ for details.
checking installed package size ... NOTE
installed size is 11.1Mb
sub-directories of 1Mb or more:
data 1.4Mb
doc 3.4Mb
include 2.6Mb
libs 2.5Mb
IMP (1.1)
Maintainer: Anup Nair nairanup50695@gmail.com
0 errors | 0 warnings | 0 notes
imputeTestbench (3.0.0)
Maintainer: Marcus W. Beck mbafs2012@gmail.com
Bug reports: https://github.com/neerajdhanraj/imputeTestbench/issues
0 errors | 0 warnings | 0 notes
incidence (1.0.0)
Maintainer: Thibaut Jombart thibautjombart@gmail.com
Bug reports: http://github.com/reconhub/incidence/issues
0 errors | 0 warnings | 0 notes
inctools (1.0.7)
Maintainer: Eduard Grebe eduardgrebe@sun.ac.za
Bug reports: https://github.com/SACEMA/inctools/issues
0 errors | 0 warnings | 0 notes
IncucyteDRC (0.5.4)
Maintainer: Phil Chapman phil.chapman@cruk.manchester.ac.uk
Bug reports: https://github.com/chapmandu2/IncucyteDRC/issues
0 errors | 0 warnings | 0 notes
iNEXT (2.0.9)
Maintainer: T. C. Hsieh euler96@gmail.com
Bug reports: https://github.com/JohnsonHsieh/iNEXT/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 416-424 (Introduction.Rmd)
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
invalid line type
Execution halted
Information (0.0.9)
Maintainer: Larsen Kim kblarsen4@gmail.com
0 errors | 0 warnings | 0 notes
InformationValue (1.2.3)
Maintainer: Selva Prabhakaran selva86@gmail.com
Bug reports: https://github.com/selva86/InformationValue/issues License:
GPL (>= 2)
0 errors | 0 warnings | 0 notes
InSilicoVA (1.1.2)
Maintainer: Zehang Li lizehang@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘InSilicoVA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/InSilicoVA.Rcheck/00install.out’ for details.
IntClust (0.0.2)
Maintainer: Marijke Van Moerbeke marijke.vanmoerbeke@uhasselt.be
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘a4Core’ ‘limma’
Packages suggested but not available for checking:
‘MLP’ ‘biomaRt’ ‘org.Hs.eg.db’ ‘a4Base’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
IntegratedJM (1.4)
Maintainer: Rudradev Sengupta rudradev.sengupta@uhasselt.be
0 errors | 0 warnings | 0 notes
IntegratedMRF (1.1.5)
Maintainer: Raziur Rahman razeeebuet@gmail.com
0 errors | 0 warnings | 0 notes
interplot (0.1.4)
Maintainer: Yue Hu yue-hu-1@uiowa.edu
0 errors | 0 warnings | 0 notes
intsvy (1.9)
Maintainer: Daniel Caro daniel.caro@education.ox.ac.uk
Bug reports: https://github.com/eldafani/intsvy/issues
0 errors | 0 warnings | 0 notes
IPtoCountry (0.0.1)
Maintainer: Ronald E. Robertson robertson.ron@husky.neu.edu
0 errors | 0 warnings | 0 notes
ITEMAN (1.0)
Maintainer: Cengiz Zopluoglu c.zopluoglu@miami.edu
0 errors | 0 warnings | 0 notes
iWISA (1.0-2)
Maintainer: Wen Xiao wx5356a@student.american.edu
0 errors | 0 warnings | 0 notes
JacobiEigen (0.2-2)
Maintainer: Bill Venables Bill.Venables@gmail.com
0 errors | 0 warnings | 0 notes
JWileymisc (0.2.1)
Maintainer: Joshua F. Wiley jwiley.psych@gmail.com
Bug reports: https://github.com/JWiley/JWileymisc/issues
0 errors | 0 warnings | 0 notes
kamila (0.1.1.1)
Maintainer: Alexander Foss alexanderhfoss@gmail.com
Bug reports: https://github.com/ahfoss/kamila/issues
0 errors | 0 warnings | 0 notes
kdetrees (0.1.5)
Maintainer: Grady Weyenberg grady.weyenberg@uky.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
as.matrix.multiPhylo : tip2tip: no visible global function definition
for ‘cophenetic’
bw.nn : <anonymous>: no visible global function definition for
‘quantile’
dist.diss: no visible binding for global variable ‘median’
dist.diss: no visible global function definition for ‘dist’
hist.kdetrees: no visible binding for global variable ‘density’
kdetrees : cutoff: no visible global function definition for ‘quantile’
kdetrees.complete: no visible global function definition for ‘plot’
kdetrees.complete: no visible global function definition for ‘hist’
kdetrees.complete: no visible global function definition for
‘write.csv’
plot.kdetrees: no visible binding for global variable ‘density’
Undefined global functions or variables:
cophenetic density dist hist median plot quantile write.csv
Consider adding
importFrom("graphics", "hist", "plot")
importFrom("stats", "cophenetic", "density", "dist", "median",
"quantile")
importFrom("utils", "write.csv")
to your NAMESPACE file.
kfigr (1.2)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com
Bug reports: https://github.com/mkoohafkan/kfigr/issues
0 errors | 0 warnings | 0 notes
Kmisc (0.5.0)
Maintainer: Kevin Ushey kevinushey@gmail.com
Bug reports: https://github.com/kevinushey/Kmisc/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Rcpp_apply_generator: no visible global function definition for
‘packageVersion’
Rcpp_tapply_generator: no visible global function definition for
‘packageVersion’
anat: no visible global function definition for ‘capture.output’
anatomy: no visible global function definition for ‘capture.output’
bwplot2: no visible global function definition for ‘capture.output’
gradient: no visible global function definition for ‘colorRampPalette’
hImg: no visible global function definition for ‘par’
... 23 lines ...
anova capture.output coef colorRampPalette complete.cases dev.off
kmeans object.size packageVersion par qbeta read.table rgb svg
write.table
Consider adding
importFrom("grDevices", "colorRampPalette", "dev.off", "rgb", "svg")
importFrom("graphics", "par")
importFrom("stats", "anova", "coef", "complete.cases", "kmeans",
"qbeta")
importFrom("utils", "capture.output", "object.size", "packageVersion",
"read.table", "write.table")
to your NAMESPACE file.
knitrBootstrap (1.0.0)
Maintainer: Jim Hester james.f.hester@gmail.com
Bug reports: https://github.com/jimhester/knitrBootstrap/issues
0 errors | 0 warnings | 0 notes
kobe (1.3.2)
Maintainer: Laurence Kell laurie.kell@iccat.int
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
getBSP: no visible global function definition for ‘read.csv’
io2box : <anonymous>: no visible global function definition for
‘quantile’
io2box : <anonymous>: no visible global function definition for
‘median’
ioAspic : <anonymous>: no visible global function definition for
‘quantile’
ioAspic : <anonymous>: no visible global function definition for
‘median’
... 55 lines ...
kobe,data.frame-missing : <anonymous>: no visible global function
definition for ‘kobeFn’
Undefined global functions or variables:
colorRampPalette grey kobe2smFn kobeFn median modifyList mtext par
quantile read.csv read.table
Consider adding
importFrom("grDevices", "colorRampPalette", "grey")
importFrom("graphics", "mtext", "par")
importFrom("stats", "median", "quantile")
importFrom("utils", "modifyList", "read.csv", "read.table")
to your NAMESPACE file.
KSD (1.0.0)
Maintainer: Min Hyung Kang Minhyung.Daniel.Kang@gmail.com
0 errors | 0 warnings | 0 notes
Lahman (5.0-0)
Maintainer: Chris Dalzell cdalzell@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.6Mb
sub-directories of 1Mb or more:
data 7.3Mb
LambertW (0.6.4)
Maintainer: Georg M. Goerg im@gmge.org
0 errors | 0 warnings | 0 notes
LANDD (1.1.0)
Maintainer: Shangzhao Qiu qsz1328@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘GOstats’ ‘GOSemSim’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
largeVis (0.1.9.1)
Maintainer: Amos Elberg amos.elberg@gmail.com
Bug reports: https://github.com/elbamos/largeVis/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Quitting from lines 14-55 (benchmarks.Rmd)
Error: processing vignette 'benchmarks.Rmd' failed with diagnostics:
formal argument "legend.key.size" matched by multiple actual arguments
Execution halted
latex2exp (0.4.0)
Maintainer: Stefano Meschiari stefano.meschiari@gmail.com
Bug reports: https://github.com/stefano-meschiari/latex2exp/issues
0 errors | 0 warnings | 0 notes
lda (1.4.2)
Maintainer: Jonathan Chang slycoder@gmail.com
0 errors | 0 warnings | 0 notes
ldatuning (0.2.0)
Maintainer: Murzintcev Nikita nikita@lreis.ac.cn
Bug reports: https://github.com/nikita-moor/ldatuning/issues
0 errors | 0 warnings | 0 notes
LDheatmap (0.99-2)
Maintainer: Brad McNeney mcneney@sfu.ca
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘chopsticks’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
LEAP (0.2)
Maintainer: Alicia T. Specht aspecht2@nd.edu
0 errors | 0 warnings | 0 notes
learningCurve (1.0)
Maintainer: Jason Freels auburngrads@live.com
0 errors | 0 warnings | 0 notes
learnstats (0.1.1)
Maintainer: Daniel Walter dswalter@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
prob: no visible global function definition for ‘pnorm’
prob: no visible global function definition for ‘dnorm’
prob: no visible global function definition for ‘plot’
prob : <anonymous>: no visible global function definition for ‘dnorm’
prob: no visible global function definition for ‘axis’
prob: no visible global function definition for ‘polygon’
prob: no visible global function definition for ‘legend’
prob: no visible global function definition for ‘jpeg’
prob: no visible global function definition for ‘dev.off’
... 37 lines ...
axis dchisq dev.off dnorm dt hist jpeg legend mtext par pchisq pf
plot pnorm polygon pt qchisq qf qqline qqnorm qt rchisq rnorm rt
runif segments title
Consider adding
importFrom("grDevices", "dev.off", "jpeg")
importFrom("graphics", "axis", "hist", "legend", "mtext", "par",
"plot", "polygon", "segments", "title")
importFrom("stats", "dchisq", "dnorm", "dt", "pchisq", "pf", "pnorm",
"pt", "qchisq", "qf", "qqline", "qqnorm", "qt", "rchisq",
"rnorm", "rt", "runif")
to your NAMESPACE file.
LexisPlotR (0.3)
Maintainer: Philipp Ottolinger philipp@ottolinger.de
0 errors | 0 warnings | 0 notes
likeLTD (6.1.1)
Maintainer: Christopher Steele c.steele.11@ucl.ac.uk
0 errors | 0 warnings | 0 notes
likert (1.3.3)
Maintainer: Jason Bryer jason@bryer.org
Bug reports: https://github.com/jbryer/likert/issues
0 errors | 0 warnings | 0 notes
linear.tools (1.3.0)
Maintainer: Fan Yang yfno1@msn.com
0 errors | 0 warnings | 0 notes
llama (0.9.1)
Maintainer: Lars Kotthoff larsko@cs.ubc.ca
1 error | 0 warnings | 0 notes
checking whether package ‘llama’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/llama.Rcheck/00install.out’ for details.
lme4 (1.1-12)
Maintainer: Ben Bolker bbolker+lme4@gmail.com
Bug reports: https://github.com/lme4/lme4/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.8Mb
sub-directories of 1Mb or more:
doc 1.8Mb
testdata 1.5Mb
lmerTest (2.0-32)
Maintainer: Alexandra Kuznetsova alku@dtu.dk
0 errors | 0 warnings | 0 notes
lmms (1.3.3)
Maintainer: Jasmin Straube j.straube@qfab.org
0 errors | 0 warnings | 0 notes
localgauss (0.35)
Maintainer: Tore Selland Kleppe tore.kleppe@uis.no
1 error | 0 warnings | 0 notes
checking whether package ‘localgauss’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/localgauss.Rcheck/00install.out’ for details.
LocFDRPois (1.0.0)
Maintainer: Kris Sankaran kriss1@stanford.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
AnalyticalOptim: no visible global function definition for ‘optim’
LLConstructor : LL: no visible global function definition for ‘dpois’
MixtureDensity: no visible global function definition for ‘glm’
MixtureDensity : f_hat: no visible global function definition for
‘predict’
NullDensity : f0: no visible global function definition for ‘dpois’
Undefined global functions or variables:
dpois glm optim predict
Consider adding
importFrom("stats", "dpois", "glm", "optim", "predict")
to your NAMESPACE file.
logisticPCA (0.2)
Maintainer: Andrew J. Landgraf andland@gmail.com
0 errors | 0 warnings | 0 notes
LOGIT (1.3)
Maintainer: Rafael S. de Souza rafael.2706@gmail.com
0 errors | 0 warnings | 0 notes
lsbclust (1.0.4)
Maintainer: Pieter Schoonees schoonees@gmail.com
0 errors | 0 warnings | 0 notes
lsl (0.5.5)
Maintainer: Po-Hsien Huang psyphh@gmail.com
0 errors | 0 warnings | 0 notes
ltbayes (0.4)
Maintainer: Timothy R. Johnson trjohns@uidaho.edu
1 error | 0 warnings | 0 notes
checking whether package ‘ltbayes’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ltbayes.Rcheck/00install.out’ for details.
lvplot (0.2.0)
Maintainer: Hadley Wickham hadley@rstudio.com
0 errors | 0 warnings | 0 notes
MAc (1.1)
Maintainer: AC Del Re acdelre@gmail.com
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘R2wd’
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘R2wd’ ‘ggplot2’ ‘metafor’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
mareg.default print.icclist print.macat print.mareg print.omni
print.summary.mareg r2.mareg summary.mareg wd.default wd.macat
wd.mareg wd.omni
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
CatCompf: no visible global function definition for ‘aov’
CatCompf: no visible global function definition for ‘TukeyHSD’
CatCompf: no visible global function definition for ‘pchisq’
CatCompr: no visible global function definition for ‘aov’
CatCompr: no visible global function definition for ‘TukeyHSD’
CatCompr: no visible global function definition for ‘pchisq’
CatModGraph: no visible global function definition for ‘ggplot’
CatModGraph: no visible global function definition for ‘aes’
CatModGraph: no visible binding for global variable ‘z’
... 147 lines ...
geom_errorbarh geom_jitter geom_point geom_smooth geom_vline ggplot
id l.ci95 lm model.extract model.matrix model.response na.omit opts
pchisq pf pnorm printCoefmat qf qt r rma scale_y_continuous se.z
se.z.tau stat_abline stat_summary u.ci95 var var.g wdGet wdHeading
wdNewDoc wdTable wi wi.tau xlab xlim ylab ylim z
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov",
"contrasts", "lm", "model.extract", "model.matrix",
"model.response", "na.omit", "pchisq", "pf", "pnorm",
"printCoefmat", "qf", "qt", "var")
to your NAMESPACE file.
macleish (0.3.0)
Maintainer: Ben Baumer ben.baumer@gmail.com
0 errors | 0 warnings | 0 notes
MAd (0.8-2)
Maintainer: AC Del Re acdelre@gmail.com
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘R2wd’
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘R2wd’ ‘ggplot2’ ‘metafor’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
mareg.default print.icclist print.macat print.mareg print.omni
print.summary.mareg r2.mareg summary.mareg wd.default wd.macat
wd.mareg wd.omni
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
CatCompf: no visible global function definition for ‘aov’
CatCompf: no visible global function definition for ‘TukeyHSD’
CatCompf: no visible global function definition for ‘pchisq’
CatCompr: no visible global function definition for ‘aov’
CatCompr: no visible global function definition for ‘TukeyHSD’
CatCompr: no visible global function definition for ‘pchisq’
CatModf: no visible global function definition for ‘aggregate’
CatModf: no visible global function definition for ‘pnorm’
CatModf: no visible global function definition for ‘pchisq’
... 35 lines ...
robustSE: no visible global function definition for ‘qt’
Undefined global functions or variables:
TukeyHSD aggregate anova aov contrasts model.extract model.matrix
model.response na.omit pchisq pf pnorm printCoefmat pt qf qt
residuals var
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov",
"contrasts", "model.extract", "model.matrix",
"model.response", "na.omit", "pchisq", "pf", "pnorm",
"printCoefmat", "pt", "qf", "qt", "residuals", "var")
to your NAMESPACE file.
maddison (0.1)
Maintainer: Eric Persson expersso5@gmail.com
0 errors | 0 warnings | 0 notes
magick (0.3)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu
Bug reports: https://github.com/ropensci/magick/issues
1 error | 0 warnings | 0 notes
checking whether package ‘magick’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/magick.Rcheck/00install.out’ for details.
manhattanly (0.1.0)
Maintainer: Sahir Bhatnagar sahir.bhatnagar@gmail.com
Bug reports: https://github.com/sahirbhatnagar/manhattanly/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in arrange_impl(.data, dots) :
'.Random.seed' is not an integer vector but of type 'NULL', so ignored
Warning: 'scatter' objects don't have these attributes: 'evaluate'
Valid attributes include:
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: 'scatter' objects don't have these attributes: 'evaluate'
... 6 lines ...
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: 'scatter' objects don't have these attributes: 'evaluate'
Valid attributes include:
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: Ignoring unknown aesthetics: text
Quitting from lines 104-105 (manhattanly.Rmd)
Error: processing vignette 'manhattanly.Rmd' failed with diagnostics:
attempt to apply non-function
Execution halted
mapr (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/mapr/issues
0 errors | 0 warnings | 0 notes
marked (1.1.11)
Maintainer: Jeff Laake Jeff.Laake@noaa.gov
0 errors | 0 warnings | 0 notes
marmap (0.9.5)
Maintainer: Eric Pante pante.eric@gmail.com
0 errors | 0 warnings | 0 notes
matrixStats (0.51.0)
Maintainer: Henrik Bengtsson henrikb@braju.com
Bug reports: https://github.com/HenrikBengtsson/matrixStats/issues
0 errors | 0 warnings | 0 notes
MAVIS (1.1.2)
Maintainer: W. Kyle Hamilton kyle.hamilton@gmail.com
0 errors | 0 warnings | 0 notes
MaxentVariableSelection (1.0-2)
Maintainer: "Alexander Jueterbock" Alexander-Jueterbock@web.de
0 errors | 0 warnings | 0 notes
MCMC.OTU (1.0.10)
Maintainer: Mikhail V. Matz matz@utexas.edu
0 errors | 0 warnings | 0 notes
MCMC.qpcr (1.2.2)
Maintainer: Mikhail V. Matz matz@utexas.edu
0 errors | 0 warnings | 0 notes
mcprofile (0.2-3)
Maintainer: Daniel Gerhard 00gerhard@gmail.com
0 errors | 0 warnings | 0 notes
mdsr (0.1.3)
Maintainer: Ben Baumer ben.baumer@gmail.com
Bug reports: https://github.com/beanumber/mdsr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
data 5.3Mb
medicalrisk (1.2)
Maintainer: Patrick McCormick patrick.mccormick@alum.mit.edu
Bug reports: https://github.com/patrickmdnet/medicalrisk/issues
0 errors | 0 warnings | 0 notes
medicare (0.1.0)
Maintainer: Robert Gambrel robert.gambrel@gmail.com
Bug reports: http://www.github.com/robertgambrel/medicare/issues
0 errors | 0 warnings | 0 notes
MEGENA (1.3.5-2)
Maintainer: Won-Min Song wonmin1984@gmail.com
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
The following object is masked from 'package:base':
union
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
... 8 lines ...
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Quitting from lines 119-127 (MEGENA_pipeline_10062016.Rmd)
Error: processing vignette 'MEGENA_pipeline_10062016.Rmd' failed with diagnostics:
formal argument "panel.background" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
plot_module: possible error in theme(panel.background =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), panel.background = element_rect(fill = "white",
colour = NA), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid.minor =
element_blank(), panel.grid.major = element_blank(), plot.title =
element_text(size = title.size), legend.position = "bottom",
legend.direction = "horizontal"): formal argument "panel.background"
matched by multiple actual arguments
... 7 lines ...
= "bottom", legend.direction = "horizontal"): formal argument
"panel.background" matched by multiple actual arguments
plot_subgraph: possible error in theme(panel.background =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), panel.background = element_rect(fill = "white",
colour = NA), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid.minor =
element_blank(), panel.grid.major = element_blank(), plot.title =
element_text(size = title.size), legend.position = "bottom",
legend.direction = "horizontal"): formal argument "panel.background"
matched by multiple actual arguments
MendelianRandomization (0.2.0)
Maintainer: Stephen Burgess sb452@medschl.cam.ac.uk
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘MendelianRandomization-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mr_plot
> ### Title: Draw a scatter plot of the genetic associations and/or causal
> ### estimates
> ### Aliases: mr_plot mr_plot,MRAll-method mr_plot,MRInput-method
>
> ### ** Examples
>
> mr_plot(mr_input(bx = ldlc, bxse = ldlcse, by = chdlodds, byse = chdloddsse),
+ line="ivw")
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: mr_plot ... plotly_build.gg -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
MergeGUI (0.2-1)
Maintainer: Xiaoyue Cheng xycheng@iastate.edu
1 error | 0 warnings | 0 notes
checking whether package ‘MergeGUI’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/MergeGUI.Rcheck/00install.out’ for details.
merTools (0.2.1)
Maintainer: Jared E. Knowles jknowles@gmail.com
Bug reports: https://www.github.com/jknowles/merTools
0 errors | 0 warnings | 0 notes
metacoder (0.1.2)
Maintainer: Zachary Foster zacharyfoster1989@gmail.com
0 errors | 0 warnings | 0 notes
metagen (1.0)
Maintainer: Thomas W. D. Möbius kontakt@thomasmoebius.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bcgVaccineData: no visible global function definition for ‘data’
bcgVaccineData: no visible global function definition for ‘qnorm’
hConfidence: no visible global function definition for ‘qchisq’
intervalEstimates_OneSgnf : crt: no visible global function definition
for ‘qt’
intervalEstimates_OneSgnf: no visible binding for global variable
‘qnorm’
metagenGeneralised: no visible binding for global variable ‘quantile’
performancePointH : property: no visible global function definition for
... 15 lines ...
renderSVG: no visible global function definition for ‘svg’
renderSVG: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
data dev.off pdf qchisq qnorm qt quantile rbinom rchisq rnorm svg
uniroot var
Consider adding
importFrom("grDevices", "dev.off", "pdf", "svg")
importFrom("stats", "qchisq", "qnorm", "qt", "quantile", "rbinom",
"rchisq", "rnorm", "uniroot", "var")
importFrom("utils", "data")
to your NAMESPACE file.
metaheur (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com
0 errors | 0 warnings | 0 notes
MetaIntegrator (1.0.3)
Maintainer: Winston A. Haynes hayneswa@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available:
‘multtest’ ‘preprocessCore’ ‘GEOquery’ ‘GEOmetadb’
Package suggested but not available for checking: ‘BiocStyle’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
metaMix (0.2)
Maintainer: Sofia Morfopoulou sofia.morfopoulou.10@ucl.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘Rmpi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
metaplotr (0.0.3)
Maintainer: Mehmet Gultas mehmetgultas@gmail.com
0 errors | 0 warnings | 0 notes
meteogRam (1.0)
Maintainer: Bogdan Bochenek bogdan.bochenek@uj.edu.pl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
crosssection: no visible global function definition for
‘colorRampPalette’
crosssection: no visible global function definition for
‘filled.contour’
crosssection: no visible global function definition for ‘axis’
crosssection: no visible global function definition for ‘par’
crosssection: no visible global function definition for ‘contour’
temperatures: no visible binding for global variable ‘time’
Undefined global functions or variables:
axis colorRampPalette contour filled.contour par time
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("graphics", "axis", "contour", "filled.contour", "par")
importFrom("stats", "time")
to your NAMESPACE file.
Methplot (1.0)
Maintainer: Xin Yang xin.yang@cimr.cam.ac.uk
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
getdata: no visible global function definition for ‘read.csv’
plotdata: no visible global function definition for ‘head’
Undefined global functions or variables:
head read.csv
Consider adding
importFrom("utils", "head", "read.csv")
to your NAMESPACE file.
metricsgraphics (0.9.0)
Maintainer: Bob Rudis bob@rudis.net
Bug reports: https://github.com/hrbrmstr/metricsgraphics/issues
0 errors | 0 warnings | 0 notes
MGLM (0.0.7)
Maintainer: Yiwen Zhang yzhang31@ncsu.edu
0 errors | 0 warnings | 0 notes
mhtboot (1.3.3)
Maintainer: Abhirup Mallik malli066@umn.edu
0 errors | 0 warnings | 0 notes
microbenchmark (1.4-2.1)
Maintainer: Olaf Mersmann olafm@p-value.net
0 errors | 0 warnings | 1 note
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
micromap (1.9.2)
Maintainer: Tom Kincaid Kincaid.Tom@epa.gov
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CatMaps: no visible binding for global variable ‘poly’
RankMaps: no visible binding for global variable ‘poly’
RankMaps: no visible global function definition for ‘median’
alterForMedian: no visible binding for global variable ‘median’
assimilatePlot: no visible global function definition for ‘gray’
bar_build: no visible global function definition for ‘median’
bar_cl_build: no visible global function definition for ‘median’
box_summary_build: no visible global function definition for ‘median’
create_DF_rank: no visible global function definition for ‘aggregate’
... 15 lines ...
print.mm: no visible global function definition for ‘png’
print.mm: no visible global function definition for ‘postscript’
print.mm: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
aggregate dev.new dev.off gray jpeg median pdf png poly postscript
tiff
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "gray", "jpeg", "pdf",
"png", "postscript", "tiff")
importFrom("stats", "aggregate", "median", "poly")
to your NAMESPACE file.
microplot (1.0-14)
Maintainer: Richard M. Heiberger rmh@temple.edu
0 errors | 0 warnings | 0 notes
MiRAnorm (1.0.0)
Maintainer: Yuda Zhu yudazhu@gmail.com
0 errors | 0 warnings | 0 notes
miscset (1.0.0)
Maintainer: Sven E. Templer sven.templer@gmail.com
Bug reports: https://github.com/setempler/miscset/issues
0 errors | 0 warnings | 0 notes
MissingDataGUI (0.2-5)
Maintainer: Xiaoyue Cheng xycheng@unomaha.edu
1 error | 0 warnings | 0 notes
checking whether package ‘MissingDataGUI’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/MissingDataGUI.Rcheck/00install.out’ for details.
mistat (1.0-4)
Maintainer: Daniele Amberti daniele.amberti@gmail.com
0 errors | 0 warnings | 1 note
checking top-level files ... NOTE
Non-standard file/directory found at top level:
‘README.html’
mistral (2.1.0)
Maintainer: Bertrand Iooss biooss@yahoo.fr
0 errors | 0 warnings | 0 notes
MIXFIM (1.0)
Maintainer: Marie-Karelle Riviere-Jourdan eldamjh@gmail.com
0 errors | 0 warnings | 0 notes
mixOmics (6.1.1)
Maintainer: Kim-Anh Le Cao k.lecao@uq.edu.au
Bug reports: mixomics@math.univ-toulouse.fr or
https://bitbucket.org/klecao/package-mixomics/issues
0 errors | 0 warnings | 0 notes
MixSIAR (3.1.7)
Maintainer: Brian Stock b1stock@ucsd.edu
Bug reports: https://github.com/brianstock/MixSIAR/issues
2 errors | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘MixSIAR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mixsiar_gui
> ### Title: Run the GUI version of MixSIAR
> ### Aliases: mixsiar_gui
>
> ### ** Examples
... 6 lines ...
Error in mixsiar_gui() :
*** gWidgetsRGtk2 package not able to be loaded. ***
If 'library('gWidgetsRGtk2')' does not work, MixSIAR GUI will not run.
On Windows/Linux, try 'install.packages('gWidgetsRGtk2')'.
On Mac, close R, download and install GTK+ from:
http://r.research.att.com/#other. Then install latest X11 application
(xQuartz) from http://xquartz.macosforge.org/landing/.
If installing GTK+ continues to be problematic, consider using the
script version of MixSIAR. See manual for help and examples.
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
OK: 26 SKIPPED: 0 FAILED: 9
1. Error: Wolves ex works (@test_ex1_wolves.R#33)
2. Error: Geese ex works (@test_ex2_geese.R#27)
3. Error: Lake ex works (@test_ex3_lake.R#27)
4. Error: Palmyra ex works (@test_ex4_palmyra.R#27)
5. Error: Killer whale ex works (@test_ex5_killerwhale.R#28)
6. Error: Snail ex works (@test_ex6_snail.R#27)
7. Error: Storm-petrel ex works (@test_ex7_stormpetrel.R#27)
8. Error: Cladocera ex works (@test_ex8_cladocera.R#31)
9. Error: Isopod ex works (@test_ex9_isopod.R#27)
Error: testthat unit tests failed
Execution halted
mizer (0.2)
Maintainer: Finlay Scott finlay.scott@jrc.ec.europa.eu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
getFMort,MizerSim-missing: warning in get_time_elements(object,
time_range, slot = "effort"): partial argument match of 'slot' to
'slot_name'
getFMortGear,MizerSim-missing: warning in get_time_elements(object,
time_range, slot = "effort"): partial argument match of 'slot' to
'slot_name'
plotFMort,MizerSim: warning in scale_y_continuous(name = "Total fishing
mortality", lim = c(0, max(plot_dat$value))): partial argument match
of 'lim' to 'limits'
... 30 lines ...
plotYieldGear,MizerSim: no visible binding for global variable ‘time’
plotYieldGear,MizerSim: no visible binding for global variable ‘value’
plotYieldGear,MizerSim: no visible binding for global variable
‘Species’
plotYieldGear,MizerSim: no visible binding for global variable ‘gear’
Undefined global functions or variables:
Species combn gear lm time value w
Consider adding
importFrom("stats", "lm", "time")
importFrom("utils", "combn")
to your NAMESPACE file.
mkin (0.9.44)
Maintainer: Johannes Ranke jranke@uni-bremen.de
Bug reports: http://github.com/jranke/mkin/issues
0 errors | 0 warnings | 0 notes
mlmc (1.0.0)
Maintainer: Louis Aslett aslett@stats.ox.ac.uk
0 errors | 0 warnings | 0 notes
mlr (2.9)
Maintainer: Bernd Bischl bernd_bischl@gmx.net
Bug reports: https://github.com/mlr-org/mlr/issues
2 errors | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘mlr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotFilterValues
> ### Title: Plot filter values using ggplot2.
> ### Aliases: plotFilterValues
>
> ### ** Examples
>
> fv = generateFilterValuesData(iris.task, method = "chi.squared")
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
call: .jinit()
error: JNI_GetCreatedJavaVMs returned -1
Execution halted
** found \donttest examples: check also with --run-donttest
checking tests ... ERROR
Running the tests in ‘tests/run-base.R’ failed.
Last 13 lines of output:
1. Error: NoFeaturesModel works with FilterWrapper (@test_base_NoFeaturesModel.R#30)
2. Error: clustering performance (@test_base_clustering.R#15)
3. Error: clustering performance with missing clusters (@test_base_clustering.R#27)
4. Error: clustering resample (@test_base_clustering.R#41)
5. Error: clustering benchmark (@test_base_clustering.R#52)
6. Error: clustering tune (@test_base_clustering.R#65)
7. Error: filterFeatures (@test_base_filterFeatures.R#9)
8. Error: plotFilterValues (@test_base_filterFeatures.R#53)
9. Error: args are passed down to filter methods (@test_base_filterFeatures.R#87)
1. ...
Error: testthat unit tests failed
Execution halted
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘C50’ ‘GPfit’ ‘RRF’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Missing or unexported object: ‘irace::removeCandidatesMetaData’
mlxR (3.1.0)
Maintainer: Marc Lavielle Marc.Lavielle@inria.fr
Bug reports: https://github.com/MarcLavielle/mlxR/issues
0 errors | 0 warnings | 0 notes
Mobilize (2.16-4)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bin.by.date: no visible binding for global variable ‘quantile’
bin.by.date: no visible global function definition for ‘na.omit’
biplot: no visible global function definition for ‘na.omit’
biplot.character: no visible global function definition for ‘runif’
biplot.character: no visible global function definition for ‘opts’
biplot.character: no visible global function definition for
‘theme_blank’
distributionplot: no visible global function definition for ‘na.omit’
distributionplot.character: no visible global function definition for
... 15 lines ...
timeplot.character: no visible global function definition for ‘rnorm’
timeplot.character: no visible binding for global variable ‘text’
userplot: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
head lines na.omit opts quantile rnorm runif text theme_blank
theme_text
Consider adding
importFrom("graphics", "lines", "text")
importFrom("stats", "na.omit", "quantile", "rnorm", "runif")
importFrom("utils", "head")
to your NAMESPACE file.
modelr (0.1.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/modelr/issues
0 errors | 0 warnings | 0 notes
Momocs (1.1.0)
Maintainer: Vincent Bonhomme bonhomme.vincent@gmail.com
Bug reports: https://github.com/vbonhomme/Momocs/issues
0 errors | 0 warnings | 0 notes
moonBook (0.1.3)
Maintainer: Keon-Woong Moon cardiomoon@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
ORplot.sub: no visible global function definition for ‘par’
ORplot.sub: no visible global function definition for ‘plot’
ORplot.sub: no visible global function definition for ‘rect’
ORplot.sub: no visible global function definition for ‘abline’
ORplot.sub: no visible global function definition for ‘text’
ORplot.sub: no visible global function definition for ‘segments’
ORplot.sub: no visible global function definition for ‘points’
densityplot: no visible global function definition for ‘terms’
densityplot: no visible global function definition for ‘as.formula’
... 38 lines ...
Consider adding
importFrom("grDevices", "rainbow")
importFrom("graphics", "abline", "legend", "lines", "par", "plot",
"points", "rect", "segments", "text")
importFrom("stats", "IQR", "anova", "as.formula", "chisq.test", "coef",
"confint", "density", "fisher.test", "fivenum",
"kruskal.test", "lm", "mad", "median", "na.omit", "resid",
"sd", "shapiro.test", "t.test", "terms", "var.test",
"xtabs")
importFrom("utils", "write.csv", "write.table")
to your NAMESPACE file.
checking files in ‘vignettes’ ... NOTE
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
morse (2.2.0)
Maintainer: Philippe Veber philippe.veber@univ-lyon1.fr
1 error | 0 warnings | 0 notes
checking whether package ‘morse’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/morse.Rcheck/00install.out’ for details.
mosaic (0.14.4)
Maintainer: Randall Pruim rpruim@calvin.edu
Bug reports: https://github.com/ProjectMOSAIC/mosaic/issues
0 errors | 0 warnings | 2 notes
checking installed package size ... NOTE
installed size is 9.4Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 6.8Mb
checking R code for possible problems ... NOTE
mMap: no visible binding for global variable ‘facet’
mScatter: no visible binding for global variable ‘facet’
mUniplot: no visible binding for global variable ‘facet’
Undefined global functions or variables:
facet
mosaicData (0.14.0)
Maintainer: Randall Pruim rpruim@calvin.edu
0 errors | 0 warnings | 0 notes
mousetrap (2.0.0)
Maintainer: Pascal J. Kieslich kieslich@psychologie.uni-mannheim.de
Bug reports: https://github.com/pascalkieslich/mousetrap/issues
0 errors | 0 warnings | 0 notes
moveHMM (1.2)
Maintainer: Theo Michelot tmichelot1@sheffield.ac.uk
0 errors | 0 warnings | 0 notes
mplot (0.7.9)
Maintainer: Garth Tarr garth.tarr@gmail.com
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
mpoly (1.0.3)
Maintainer: David Kahle david.kahle@gmail.com
Bug reports: https://github.com/dkahle/mpoly/issues
0 errors | 0 warnings | 0 notes
mrMLM (1.3)
Maintainer: Yuanming Zhangsoyzhang@mail.hzau.edu.cn
1 error | 0 warnings | 0 notes
checking whether package ‘mrMLM’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/mrMLM.Rcheck/00install.out’ for details.
MRMR (0.1.4)
Maintainer: Brian A. Fannin FanninQED@Yahoo.com
0 errors | 0 warnings | 0 notes
MSCMT (1.0.0)
Maintainer: Martin Becker martin.becker@mx.uni-saarland.de
0 errors | 0 warnings | 0 notes
MSG (0.3)
Maintainer: Yihui Xie xie@yihui.name
Bug reports: https://github.com/yihui/MSG/issues
0 errors | 0 warnings | 0 notes
MSGARCH (0.17)
Maintainer: Keven Bluteau Keven.Bluteau@unine.ch
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
doc 2.5Mb
libs 4.1Mb
mtconnectR (1.0.1)
Maintainer: Subramanyam Ravishankar subramanyam@systeminsights.com
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Error: `mapped_plot` not equal to lazyLoadDBfetch(c(36596L, 320L), datafile, compressed, envhook).
Component "layers": Component 1: Component 3: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 3: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 7: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 7: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 9: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 9: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 12: Modes of target, current: function, environment
Component "layers": Component 1: Component 12: target, current do not match when deparsed
Component "layers": Component 2: Component 3: Component 2: Modes of target, current: fun
testthat results ================================================================
OK: 0 SKIPPED: 0 FAILED: 0
Execution halted
MultiBD (0.2.0)
Maintainer: Marc A. Suchard msuchard@ucla.edu
0 errors | 0 warnings | 0 notes
multiDimBio (1.0.1)
Maintainer: Samuel V. Scarpino scarpino@utexas.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘pcaMethods’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
multilevelPSA (1.2.4)
Maintainer: Jason Bryer jason@bryer.org
Bug reports: https://github.com/jbryer/multilevelPSA/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
missing.plot: possible error in theme(axis.text.x = element_text(size =
6, angle = -90, hjust = 0.5, vjust = 0.5), axis.text.x =
element_blank(), axis.ticks = element_blank()): formal argument
"axis.text.x" matched by multiple actual arguments
MultiMeta (0.1)
Maintainer: Dragana Vuckovic dragana.vuckovic@burlo.trieste.it
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
betas_plot: no visible global function definition for ‘cov2cor’
betas_plot: no visible global function definition for
‘colorRampPalette’
betas_plot: no visible global function definition for ‘pdf’
betas_plot: no visible global function definition for ‘dev.off’
mhplot: no visible global function definition for ‘read.table’
mhplot: no visible global function definition for ‘pdf’
mhplot: no visible global function definition for ‘plot’
mhplot: no visible global function definition for ‘points’
... 14 lines ...
qqplotter: no visible global function definition for ‘abline’
qqplotter: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
abline axis colorRampPalette cov2cor dev.off median pchisq pdf plot
points ppoints qchisq read.table write.table
Consider adding
importFrom("grDevices", "colorRampPalette", "dev.off", "pdf")
importFrom("graphics", "abline", "axis", "plot", "points")
importFrom("stats", "cov2cor", "median", "pchisq", "ppoints", "qchisq")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
multipanelfigure (0.8.3)
Maintainer: Johannes Graumann jog2030@qatar-med.cornell.edu
0 errors | 0 warnings | 0 notes
munsell (0.4.3)
Maintainer: Charlotte Wickham cwickham@gmail.com
0 errors | 0 warnings | 0 notes
musica (0.1.3)
Maintainer: Martin Hanel hanel@fzp.czu.cz
0 errors | 0 warnings | 0 notes
mvdalab (1.1)
Maintainer: Nelson Lee Afanador nelson.afanador@mvdalab.com
0 errors | 0 warnings | 0 notes
mvtboost (0.5.0)
Maintainer: Patrick Miller patrick.mil10@gmail.com
Bug reports: https://github.com/patr1ckm/mvtboost/issues
0 errors | 0 warnings | 0 notes
mwaved (1.1.4)
Maintainer: Justin Rory Wishart justin.wishart@mq.edu.au
Bug reports: https://github.com/jrwishart/mwaved/issues
1 error | 0 warnings | 0 notes
checking whether package ‘mwaved’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/mwaved.Rcheck/00install.out’ for details.
myTAI (0.4.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk
Bug reports: https://github.com/HajkD/myTAI/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘edgeR’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ncappc (0.2.1.1)
Maintainer: Chayan Acharya chayan.acharya@farmbio.uu.se
0 errors | 0 warnings | 0 notes
NeatMap (0.3.6.2)
Maintainer: Satwik Rajaram satwik@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
data.reduction: no visible global function definition for ‘prcomp’
data.reduction: no visible global function definition for ‘hclust’
data.reduction: no visible global function definition for ‘as.dist’
data.reduction: no visible global function definition for ‘cor’
data.reduction: no visible global function definition for ‘dist’
heatmap1: no visible global function definition for ‘sd’
lineplot: no visible global function definition for ‘sd’
normalize: no visible global function definition for ‘sd’
profileplot3d : ColorFunction: no visible global function definition
for ‘rgb’
profileplot3d : ColorFunction: no visible global function definition
for ‘colorRamp’
profileplot3d: no visible global function definition for ‘sd’
profileplot3d: no visible global function definition for ‘gray’
Undefined global functions or variables:
as.dist colorRamp cor dist gray hclust prcomp rgb sd
Consider adding
importFrom("grDevices", "colorRamp", "gray", "rgb")
importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
to your NAMESPACE file.
checking compiled code ... NOTE
File ‘NeatMap/libs/NeatMap.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘nMDS_R.o’
Found ‘_srand’, possibly from ‘srand’ (C)
Object: ‘nMDS_R.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
netgen (1.3)
Maintainer: Jakob Bossek j.bossek@gmail.com
Bug reports: https://github.com/jakobbossek/netgen/issues
0 errors | 0 warnings | 0 notes
networkreporting (0.1.1)
Maintainer: Dennis M. Feehan feehan@berkeley.edu
0 errors | 0 warnings | 0 notes
NeuralNetTools (1.4.0)
Maintainer: Marcus W. Beck mbafs2012@gmail.com
Bug reports: https://github.com/fawda123/NeuralNetTools/issues
0 errors | 0 warnings | 0 notes
neuropsychology (0.2.4)
Maintainer: Dominique Makowski dom.makowski@gmail.com
0 errors | 0 warnings | 0 notes
NFP (0.99.1)
Maintainer: Yang Cao yiluheihei@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘KEGGgraph’
Packages suggested but not available for checking:
‘BiocStyle’ ‘graphite’ ‘NFPdata’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
nhstplot (1.0.0)
Maintainer: Nils Myszkowski nmyszkowski@pace.edu
0 errors | 0 warnings | 0 notes
nima (0.3.0)
Maintainer: Nima Hejazi nhejazi@berkeley.edu
0 errors | 0 warnings | 0 notes
nimble (0.6-1)
Maintainer: Christopher Paciorek paciorek@stat.berkeley.edu
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 11.9Mb
sub-directories of 1Mb or more:
CppCode 3.6Mb
R 2.3Mb
classic-bugs 1.5Mb
include 3.7Mb
nlstimedist (1.0.1)
Maintainer: Nathan Eastwood nathan.eastwood@icloud.com
Bug reports: https://github.com/PlymouthUniversitySD/nlstimedist/issues
0 errors | 0 warnings | 0 notes
NlsyLinks (2.0.6)
Maintainer: Will Beasley wibeasley@hotmail.com
Bug reports: https://github.com/LiveOak/NlsyLinks/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.5Mb
sub-directories of 1Mb or more:
data 4.3Mb
reports 2.2Mb
nLTT (1.3.1)
Maintainer: Thijs Janzen thijsjanzen@gmail.com
Bug reports: https://github.com/richelbilderbeek/nLTT/issues
0 errors | 0 warnings | 0 notes
NMF (0.20.6)
Maintainer: Renaud Gaujoux renaud@tx.technion.ac.il
Bug reports: http://github.com/renozao/NMF/issues
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘RcppOctave’ ‘doMPI’
checking R code for possible problems ... NOTE
algorithm,NMFStrategyOctave: no visible global function definition for
‘fstop’
evar,ANY: no visible binding for global variable ‘Biobase’
nmf,matrix-numeric-NMFStrategy : run.all: no visible binding for global
variable ‘n’
nmf,matrix-numeric-NMFStrategy : run.all: no visible binding for global
variable ‘RNGobj’
rss,matrix: no visible binding for global variable ‘Biobase’
Undefined global functions or variables:
Biobase RNGobj fstop n
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘RcppOctave’
NNTbiomarker (0.29.11)
Maintainer: Roger Day day01@pitt.edu
0 errors | 0 warnings | 0 notes
NORRRM (1.0.0)
Maintainer: Renee Gonzalez Guzman rguzman@cicese.edu.mx
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CIPW: no visible global function definition for ‘data’
CIPW: no visible binding for global variable ‘AtomWeight’
CIPW: no visible binding for global variable ‘MinWeight’
CIPW: no visible binding for global variable ‘OxiWeight’
CIPW.trace: no visible global function definition for ‘data’
CIPW.trace: no visible binding for global variable ‘AtomWeight’
CIPW.trace: no visible binding for global variable ‘MinWeight’
CIPW.trace: no visible binding for global variable ‘OxiWeight’
Undefined global functions or variables:
AtomWeight MinWeight OxiWeight data
Consider adding
importFrom("utils", "data")
to your NAMESPACE file.
nparACT (0.6)
Maintainer: Christine Blume christine.blume@sbg.ac.at
0 errors | 0 warnings | 0 notes
NPflow (0.10.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu
Bug reports: https://github.com/borishejblum/NPflow/issues
0 errors | 0 warnings | 0 notes
npregfast (1.3.0)
Maintainer: Marta Sestelo sestelo@uvigo.es
Bug reports: http://github.com/sestelo/npregfast/issues
1 error | 0 warnings | 0 notes
checking whether package ‘npregfast’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/npregfast.Rcheck/00install.out’ for details.
nullabor (0.3.1)
Maintainer: Di Cook dicook@iastate.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
box_dist: no visible global function definition for ‘quantile’
calc_mean_dist: no visible global function definition for ‘filter’
n: no visible global function definition for ‘resid’
null_dist : <anonymous>: no visible global function definition for
‘coef’
null_lm : <anonymous>: no visible global function definition for
‘predict’
reg_dist: no visible global function definition for ‘coef’
reg_dist: no visible global function definition for ‘lm’
... 10 lines ...
sep_dist: no visible global function definition for ‘cutree’
sep_dist: no visible global function definition for ‘hclust’
uni_dist: no visible global function definition for ‘sd’
Undefined global functions or variables:
coef cutree dist filter hclust lm predict quantile rbinom resid rnorm
sd update
Consider adding
importFrom("stats", "coef", "cutree", "dist", "filter", "hclust", "lm",
"predict", "quantile", "rbinom", "resid", "rnorm", "sd",
"update")
to your NAMESPACE file.
nzelect (0.2.0)
Maintainer: Peter Ellis peter.ellis2013nz@gmail.com
0 errors | 0 warnings | 0 notes
oapackage (2.0.23)
Maintainer: Pieter Thijs Eendebak pieter.eendebak@gmail.com
0 errors | 0 warnings | 0 notes
oaPlots (0.0.25)
Maintainer: Jason Waddell jason.waddell@openanalytics.eu
0 errors | 0 warnings | 0 notes
oaxaca (0.1.3)
Maintainer: Marek Hlavac hlavac@fas.harvard.edu
0 errors | 0 warnings | 0 notes
obAnalytics (0.1.0)
Maintainer: Philip Stubbings phil@parasec.net
Bug reports: https://github.com/phil8192/ob-analytics/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘obAnalytics-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotVolumePercentiles
> ### Title: Visualise available limit order book liquidity through time.
> ### Aliases: plotVolumePercentiles
>
> ### ** Examples
... 10 lines ...
plotVolumePercentiles => time range = 7200 secs
plotVolumePercentiles => aggregating to mins intervals
plotVolumePercentiles => aggregation: 2015-05-01 02:29:00 : 2015-05-01 04:29:00 by = mins
Warning: Ignoring unknown aesthetics: ymax
Warning: Ignoring unknown aesthetics: ymax
Warning in rep(yes, length.out = length(ans)) :
'x' is NULL so the result will be NULL
Error in ifelse(data$ymax == 0, data$ymin, data$ymax) :
replacement has length zero
Calls: <Anonymous> ... f -> <Anonymous> -> f -> <Anonymous> -> f -> ifelse
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 535-541 (guide.Rmd)
Error: processing vignette 'guide.Rmd' failed with diagnostics:
replacement has length zero
Execution halted
oddsratio (0.3.0)
Maintainer: Patrick Schratz patrick.schratz@gmail.com
Bug reports: https://github.com/pat-s/oddsratio/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘oddsratio-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add.oddsratio.into.plot
> ### Title: Insert odds ratios of GAM(M)s into smoothing function
> ### Aliases: add.oddsratio.into.plot
>
> ### ** Examples
... 36 lines ...
+ values = c(0.4, 0.6))
>
> # add or.object2 into plot
> add.oddsratio.into.plot(plot.object, or.object2, or.yloc = 2.1, values.yloc = 2,
+ line.col = "green4", text.col = "black",
+ rect.col = "green4", rect.alpha = 0.2,
+ line.alpha = 1, line.type = "dashed",
+ arrow.xloc.r = 0.01, arrow.xloc.l = -0.01,
+ arrow.length = 0.01, rect = TRUE)
Error: Aesthetics must be either length 1 or the same as the data (1): xmin, xmax, ymin, ymax, fill, alpha
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 130-139 (function.tutorial.Rmd)
Error: processing vignette 'function.tutorial.Rmd' failed with diagnostics:
Aesthetics must be either length 1 or the same as the data (1): xmin, xmax, ymin, ymax, fill, alpha
Execution halted
OECD (0.2.2)
Maintainer: Eric Persson expersso5@gmail.com
Bug reports: https://www.github.com/expersso/OECD/issues
0 errors | 0 warnings | 0 notes
onlineCPD (1.0)
Maintainer: Zachary Zanussi zachary9506@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘onlineCPD-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: findCP
> ### Title: Wisely Pick Changepoints
> ### Aliases: findCP
>
> ### ** Examples
>
> ## Two changepoints within \code{buffer} points:
> set.seed(5)
> y <- c(rnorm(15,0.5,0.01),0.505,0.51,0.015,0.52,rnorm(15,0.6,0.05))
> res <- offlineCPD(y)
> plot(res,buffer=10) ## Will replace the two changepoints
Error: Aesthetics must be either length 1 or the same as the data (1): x, y, xend, yend, alpha
Execution halted
OpasnetUtils (1.2.0)
Maintainer: Teemu Rintala teemu.rintala.a@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ComputeDependencies: no visible global function definition for ‘find’
Fetch: no visible global function definition for ‘find’
Q0.025: no visible global function definition for ‘quantile’
Q0.975: no visible global function definition for ‘quantile’
interpf: no visible global function definition for ‘qnorm’
interpf: no visible global function definition for ‘rnorm’
interpf: no visible global function definition for ‘runif’
oapply: no visible global function definition for ‘aggregate’
odebug: no visible global function definition for ‘combn’
... 8 lines ...
‘URLencode’
rdirichlet: no visible global function definition for ‘rgamma’
tidy: no visible global function definition for ‘reshape’
Undefined global functions or variables:
URLencode aggregate aov as.formula combn find qnorm quantile
read.table reshape rgamma rnorm runif
Consider adding
importFrom("stats", "aggregate", "aov", "as.formula", "qnorm",
"quantile", "reshape", "rgamma", "rnorm", "runif")
importFrom("utils", "URLencode", "combn", "find", "read.table")
to your NAMESPACE file.
OpenStreetMap (0.3.3)
Maintainer: Ian Fellows ian@fellstat.com
1 error | 0 warnings | 0 notes
checking whether package ‘OpenStreetMap’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/OpenStreetMap.Rcheck/00install.out’ for details.
openVA (1.0.1)
Maintainer: Zehang Li lizehang@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘openVA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/openVA.Rcheck/00install.out’ for details.
optiRum (0.37.3)
Maintainer: Stephanie Locke stephanie.g.locke@gmail.com
Bug reports: https://github.com/stephlocke/optiRum/issues
0 errors | 0 warnings | 0 notes
orderedLasso (1.7)
Maintainer: Xiaotong Suo xiaotong@stanford.edu
0 errors | 0 warnings | 2 notes
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
predict.orderedLasso predict.orderedLasso.path predict.timeLagLasso
predict.timeLagLasso.path
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
error.bars: no visible global function definition for ‘segments’
lambda.interp: no visible global function definition for ‘approx’
orderedLasso: no visible binding for global variable ‘sd’
orderedLasso.cv: no visible binding for global variable ‘var’
plot.orderedLasso.cv: no visible global function definition for ‘par’
plot.orderedLasso.cv: no visible global function definition for ‘plot’
plot.orderedLasso.cv: no visible global function definition for ‘axis’
plot.orderedLasso.cv: no visible global function definition for ‘mtext’
plot.orderedLasso.cv: no visible global function definition for
... 12 lines ...
timeLagLasso: no visible binding for global variable ‘sd’
timeLagLasso.cv: no visible binding for global variable ‘sd’
timeLagLasso.cv: no visible binding for global variable ‘var’
timeLagLasso.path: no visible binding for global variable ‘sd’
Undefined global functions or variables:
abline approx axis mtext par plot points sd segments var
Consider adding
importFrom("graphics", "abline", "axis", "mtext", "par", "plot",
"points", "segments")
importFrom("stats", "approx", "sd", "var")
to your NAMESPACE file.
orgR (0.9.0)
Maintainer: Yi Tang yi.tang.uk@me.com
0 errors | 0 warnings | 0 notes
OriGen (1.4.3)
Maintainer: John Michael O. Ranola ranolaj@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘OriGen’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/OriGen.Rcheck/00install.out’ for details.
osmplotr (0.2.3)
Maintainer: Mark Padgham mark.padgham@email.com
Bug reports: https://github.com/ropenscilabs/osmplotr/issues
0 errors | 0 warnings | 0 notes
OutbreakTools (0.1-14)
Maintainer: Thibaut Jombart thibautjombart@gmail.com
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘OutbreakTools-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ToyOutbreakRaw
> ### Title: Raw simulated outbreak dataset
> ### Aliases: ToyOutbreakRaw
> ### Keywords: dataset
>
... 572 lines ...
> plot(get.contacts(x, from=2, to=2.1), main="Contact network - day 2",
+ displaylabels=TRUE)
> plot(get.contacts(x, from=3, to=3.1), main="Contact network - day 3",
+ displaylabels=TRUE)
>
> ## Mapping the outbreak (by sex) ##
> plot(x,'geo',location=c('lon','lat'),zoom=13,colorBy='Sex')
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=51.516439,-0.171146&zoom=13&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Error: GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in .local(x, ...) :
The following sequence IDs are not in the dataset: 311, 222
Warning in .local(x, ...) :
The following sequence IDs are not in the dataset: 311, 222
Warning in (if (out_format(c("latex", "sweave", "listings"))) sanitize_fn else paste0)(path, :
replaced special characters in figure filename "figs/OutbreakTools-out.width==".8\\textwidth"" -> "figs/OutbreakTools-out.width___.8\\textwidth_"
Warning in (if (out_format(c("latex", "sweave", "listings"))) sanitize_fn else paste0)(path, :
dots in figure paths replaced with _ ("figs/OutbreakTools-out_width____8//textwidth_")
Warning: The shape palette can deal with a maximum of 6 discrete values because
more than 6 becomes difficult to discriminate; you have 11. Consider
specifying shapes manually if you must have them.
Warning: Removed 58 rows containing missing values (geom_point).
Warning: `show_guide` has been deprecated. Please use `show.legend` instead.
Warning: `show_guide` has been deprecated. Please use `show.legend` instead.
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=51.516439,-0.171146&zoom=14&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Quitting from lines 1022-1023 (OutbreakTools.Rnw)
Error: processing vignette 'OutbreakTools.Rnw' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
P2C2M (0.7.6)
Maintainer: Michael Gruenstaeudl mi.gruenstaeudl@gmail.com
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘genealogicalSorting’ ‘phybase’ ‘Rmpi’
checking R code for possible problems ... NOTE
ms.exec: no visible global function definition for ‘tail’
p2c2m.readstarb: no visible global function definition for ‘head’
p2c2m.readstarb: no visible binding for global variable ‘head’
rmOutlrs: no visible global function definition for ‘boxplot.stats’
rmext: no visible global function definition for ‘tail’
rowMedians: no visible binding for global variable ‘median’
stats.acrGenes: no visible binding for global variable ‘sd’
stats.perGene: no visible binding for global variable ‘sd’
statshelpers.cv: no visible binding for global variable ‘sd’
statshelpers.qntls: no visible binding for global variable ‘quantile’
Undefined global functions or variables:
boxplot.stats head median quantile sd tail
Consider adding
importFrom("grDevices", "boxplot.stats")
importFrom("stats", "median", "quantile", "sd")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
pa (1.2-1)
Maintainer: Yang Lu yang.lu2014@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘grid’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.formula.make: no visible global function definition for ‘formula’
regress: no visible global function definition for ‘lm’
regress: no visible global function definition for ‘model.matrix’
Undefined global functions or variables:
formula lm model.matrix
Consider adding
importFrom("stats", "formula", "lm", "model.matrix")
to your NAMESPACE file.
packcircles (0.1.1)
Maintainer: Michael Bedward michael.bedward@gmail.com
0 errors | 0 warnings | 0 notes
pagenum (1.0)
Maintainer: Kevin Wright kw.stat@gmail.com
Bug reports: https://github.com/kwstat/pagenum/issues
0 errors | 0 warnings | 0 notes
PairedData (1.0.1)
Maintainer: Stephane Champely champely@univ-lyon1.fr
0 errors | 0 warnings | 4 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘MASS’ ‘gld’ ‘mvtnorm’
Please remove these calls from your code.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
bonettseier.var.test.default bonettseier.var.test.paired
grambsch.var.test.default grambsch.var.test.paired
imam.var.test.default imam.var.test.paired levene.var.test.default
levene.var.test.paired mcculloch.var.test.default
mcculloch.var.test.paired sandvikolsson.var.test.default
sandvikolsson.var.test.paired t.test.paired t.test.paired
var.test.default var.test.paired wilcox.test.paired
winsor.cor.test.default winsor.cor.test.paired yuen.t.test.default
yuen.t.test.formula yuen.t.test.paired
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
bonettseier.var.test.default: no visible global function definition for
‘complete.cases’
bonettseier.var.test.default: no visible global function definition for
‘median’
bonettseier.var.test.default: no visible global function definition for
‘sd’
bonettseier.var.test.default: no visible global function definition for
‘cor’
bonettseier.var.test.default: no visible global function definition for
... 72 lines ...
summary,paired: no visible global function definition for ‘cor’
Undefined global functions or variables:
IQR complete.cases cor cor.test dnorm integrate mad median pchisq pf
pnorm pt qchisq qf qnorm qt rbinom reorder sd t.test terms var
wilcox.test
Consider adding
importFrom("stats", "IQR", "complete.cases", "cor", "cor.test",
"dnorm", "integrate", "mad", "median", "pchisq", "pf",
"pnorm", "pt", "qchisq", "qf", "qnorm", "qt", "rbinom",
"reorder", "sd", "t.test", "terms", "var", "wilcox.test")
to your NAMESPACE file.
checking Rd line widths ... NOTE
Rd file 'mcculloch.var.test.Rd':
\usage lines wider than 90 characters:
alternative = c("two.sided", "less", "greater"),method= c("spearman","pearson", "kendall"),
Rd file 'plot.Rd':
\usage lines wider than 90 characters:
plot(x, groups=NULL,subjects=NULL, facet=TRUE,type=c("correlation","BA","McNeil","profile"),...)
These lines will be truncated in the PDF manual.
paleofire (1.1.9)
Maintainer: Olivier Blarquez blarquez@gmail.com
0 errors | 0 warnings | 0 notes
palettetown (0.1.1)
Maintainer: Tim Lucas timcdlucas@gmail.com
0 errors | 0 warnings | 0 notes
pAnalysis (2.0)
Maintainer: Joseph G Kreke jkreke2@gmail.com
0 errors | 0 warnings | 0 notes
pander (0.6.0)
Maintainer: Gergely Daróczi daroczig@rapporter.net
Bug reports: https://github.com/rapporter/pander/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: Hmisc
Quitting from lines 13-18 (pander.Rmd)
Error: processing vignette 'pander.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
checking dependencies in R code ... NOTE
Missing or unexported object: ‘rms::reVector’
ParallelTree (0.1.1)
Maintainer: Patrick O'Keefe patrick.okeefe@vanderbilt.edu
0 errors | 0 warnings | 0 notes
ParamHelpers (1.9)
Maintainer: Bernd Bischl bernd_bischl@gmx.net
Bug reports: https://github.com/berndbischl/ParamHelpers/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
3. Failure: convertParamSetToIrace work with vecparam (@test_convertParamSetToIrace.R#85)
b$b not equal to c("v", "w").
target is NULL, current is character
testthat results ================================================================
OK: 1003 SKIPPED: 0 FAILED: 3
1. Error: convertParamSetToIrace (@test_convertParamSetToIrace.R#32)
2. Failure: convertParamSetToIrace uses correct boundaries (@test_convertParamSetToIrace.R#69)
3. Failure: convertParamSetToIrace work with vecparam (@test_convertParamSetToIrace.R#85)
Error: testthat unit tests failed
Execution halted
partialAR (1.0.5)
Maintainer: Matthew Clegg matthewcleggphd@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
estimate.rho.par: no visible global function definition for ‘var’
estimate.sigma.par: no visible global function definition for ‘sd’
estimate.sigma.par: no visible global function definition for ‘var’
fit.par: no visible global function definition for ‘sd’
fit.par.both: no visible global function definition for ‘sd’
fit.par.both: no visible global function definition for ‘median’
fit.par.both: no visible global function definition for ‘optim’
fit.par.both: no visible global function definition for ‘nlm’
fit.par.mr: no visible global function definition for ‘sd’
... 42 lines ...
‘is’
Undefined global functions or variables:
approx is median nlm optim optimize qchisq quantile read.table rnorm
rt sd var write.table
Consider adding
importFrom("methods", "is")
importFrom("stats", "approx", "median", "nlm", "optim", "optimize",
"qchisq", "quantile", "rnorm", "rt", "sd", "var")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
PASenseWear (1.0)
Maintainer: Yukun Zhang yukzhang@ucalgary.ca
0 errors | 0 warnings | 0 notes
PASWR2 (1.0.2)
Maintainer: Alan T. Arnholt arnholtat@appstate.edu
0 errors | 0 warnings | 0 notes
patPRO (1.1.0)
Maintainer: Geoffrey D Hannigan ghanni@upenn.edu
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Checking should be performed on sources prepared by ‘R CMD build’.
pauwels2014 (1.0)
Maintainer: Edouard Pauwels pauwelsed@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
add_noise: no visible global function definition for ‘rnorm’
estimate_risk_dream6 : <anonymous>: no visible global function
definition for ‘var’
generate_sample: no visible global function definition for ‘rnorm’
generate_sample: no visible global function definition for ‘runif’
sample_function: no visible global function definition for ‘runif’
sample_function : <anonymous>: no visible global function definition
for ‘var’
sample_function_multi_mod_weight: no visible global function definition
for ‘runif’
sample_function_multi_mod_weight : <anonymous>: no visible global
function definition for ‘var’
sample_function_single_mod: no visible global function definition for
‘runif’
Undefined global functions or variables:
rnorm runif var
Consider adding
importFrom("stats", "rnorm", "runif", "var")
to your NAMESPACE file.
PAWL (0.5)
Maintainer: Pierre Jacob pierre.jacob.work@gmail.com
0 errors | 0 warnings | 4 notes
checking whether the namespace can be loaded with stated dependencies ... NOTE
Warning: no function found corresponding to methods exports from ‘PAWL’ for: ‘show’
A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘foreach’ ‘ggplot2’ ‘reshape’
Please remove these calls from your code.
Packages in Depends field not imported from:
‘foreach’ ‘ggplot2’ ‘methods’ ‘mvtnorm’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
ConvertResults: no visible global function definition for ‘%do%’
ConvertResults: no visible global function definition for ‘foreach’
PlotAllVar: no visible global function definition for ‘melt’
PlotAllVar: no visible global function definition for ‘ggplot’
PlotAllVar: no visible global function definition for ‘aes’
PlotAllVar: no visible global function definition for ‘geom_line’
PlotAllVar: no visible global function definition for ‘facet_wrap’
PlotAllVar: no visible global function definition for ‘theme’
PlotAllVar: no visible global function definition for ‘element_text’
... 74 lines ...
geom_density2d geom_line geom_point geom_step geom_vline ggplot hist
labs mahalanobis melt new quantile rgamma rmultinom rmvnorm rnorm
runif stat_bin2d tail theme xlab ylab ylim
Consider adding
importFrom("graphics", "abline", "hist")
importFrom("methods", "new")
importFrom("stats", "cov", "mahalanobis", "quantile", "rgamma",
"rmultinom", "rnorm", "runif")
importFrom("utils", "tail")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking Rd line widths ... NOTE
Rd file 'createAdaptiveRandomWalkProposal.Rd':
\usage lines wider than 90 characters:
createAdaptiveRandomWalkProposal(nchains, targetdimension, adaptiveproposal, adaptationrate, sigma_init)
These lines will be truncated in the PDF manual.
PBImisc (1.0)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com
0 errors | 0 warnings | 0 notes
pcadapt (3.0.3)
Maintainer: Keurcien Luu keurcien.luu@imag.fr
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘qvalue’
pcaPA (2.0.2)
Maintainer: Carlos A. Arias caariasr22@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘pcaPA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/pcaPA.Rcheck/00install.out’ for details.
pcrcoal (1.2.0)
Maintainer: Botond Sipos sbotond@gmail.com
0 errors | 0 warnings | 0 notes
pcrsim (1.0.1)
Maintainer: Oskar Hansson oskar.hansson@fhi.no
Bug reports: https://github.com/OskarHansson/pcrsim/issues
1 error | 0 warnings | 0 notes
checking whether package ‘pcrsim’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/pcrsim.Rcheck/00install.out’ for details.
PDQutils (0.1.5)
Maintainer: Steven E. Pav shabbychef@gmail.com
Bug reports: https://github.com/shabbychef/PDQutils/issues
0 errors | 0 warnings | 0 notes
PedCNV (0.1)
Maintainer: Meiling Liu meiling.sta@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘Rcpp’ ‘RcppArmadillo’ ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
AssoTestProc: no visible global function definition for ‘rbinom’
AssoTestProc: no visible global function definition for ‘princomp’
AssoTestProc: no visible global function definition for ‘loadings’
AssoTestProc: no visible global function definition for ‘lm’
CNVtypeAnay: no visible global function definition for ‘cov’
ClusProc: no visible global function definition for ‘princomp’
ClusProc: no visible global function definition for ‘prcomp’
ClusProc0: no visible global function definition for ‘kmeans’
ClusProc0: no visible global function definition for ‘cov’
... 12 lines ...
plot.clust: no visible global function definition for ‘title’
plot.clust: no visible global function definition for ‘mtext’
plot.clust: no visible global function definition for ‘text’
Undefined global functions or variables:
aes_string barplot cor cov geom_histogram kmeans lm loadings mtext
pchisq prcomp princomp qplot rbinom text title var
Consider adding
importFrom("graphics", "barplot", "mtext", "text", "title")
importFrom("stats", "cor", "cov", "kmeans", "lm", "loadings", "pchisq",
"prcomp", "princomp", "rbinom", "var")
to your NAMESPACE file.
pems.utils (0.2.17.8)
Maintainer: Karl Ropkins k.ropkins@its.leeds.ac.uk
0 errors | 0 warnings | 0 notes
peptider (0.2.2)
Maintainer: Eric Hare erichare@iastate.edu
Bug reports: https://github.com/heike/peptider/issues
0 errors | 0 warnings | 0 notes
pequod (0.0-5)
Maintainer: Alberto Mirisola alberto.mirisola@gmail.com
0 errors | 0 warnings | 0 notes
performanceEstimation (1.1.0)
Maintainer: Luis Torgo ltorgo@dcc.fc.up.pt
Bug reports: https://github.com/ltorgo/performanceEstimation/issues
0 errors | 0 warnings | 0 notes
permubiome (1.1)
Maintainer: Alfonso Benitez-Paez abenitez@iata.csic.es
0 errors | 0 warnings | 0 notes
perry (0.2.0)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
hasMethod: no visible global function definition for ‘getS3method’
Undefined global functions or variables:
getS3method
Consider adding
importFrom("utils", "getS3method")
to your NAMESPACE file.
perspectev (1.1)
Maintainer: Kenneth B. Hoehn perspectev@gmail.com
0 errors | 0 warnings | 0 notes
PGRdup (0.2.2.1)
Maintainer: J. Aravind j.aravind@icar.gov.in
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
ERROR: Duplicated records found in prim.key field
ERROR: NULL records found in prim.key field
OK: No duplicated records found in prim.key field
OK: No NULL records found in prim.key field
Fuzzy matching
Phonetic matching
Semantic matching
Fuzzy matching
Phonetic matching
Semantic matching
Quitting from lines 995-1061 (Introduction.Rmd)
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
formal argument "axis.ticks.y" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
ViewProbDup: possible error in theme(panel.background =
element_rect(fill = "transparent"), axis.title.x =
element_text(colour = "black", margin = margin(20, 0, 20, 0)),
axis.ticks.x = element_blank(), axis.text.x = element_blank(),
axis.ticks.y = element_blank(), axis.line = element_line(colour =
NA), axis.line.y = element_line(colour = "black"), axis.ticks.y =
element_line(colour = "black"), axis.text.y = element_text(colour =
"black"), axis.title.y = element_blank(), plot.margin = unit(c(0,
0.5, 0.5, 0.5), "cm"), panel.grid = element_blank()): formal argument
"axis.ticks.y" matched by multiple actual arguments
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘RecordLinkage’
PhaseType (0.1.3)
Maintainer: Louis Aslett louis@maths.tcd.ie
0 errors | 0 warnings | 3 notes
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘ggplot2’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
plot.phtMCMC: no visible global function definition for ‘ggplot’
plot.phtMCMC: no visible global function definition for ‘melt’
plot.phtMCMC: no visible global function definition for ‘geom_line’
plot.phtMCMC: no visible global function definition for ‘aes_string’
plot.phtMCMC: no visible global function definition for ‘geom_smooth’
plot.phtMCMC: no visible global function definition for ‘facet_wrap’
plot.phtMCMC: no visible global function definition for ‘ggtitle’
plot.phtMCMC: no visible global function definition for ‘xlab’
plot.phtMCMC: no visible global function definition for ‘ylab’
plot.phtMCMC: no visible global function definition for ‘geom_density’
Undefined global functions or variables:
aes_string facet_wrap geom_density geom_line geom_smooth ggplot
ggtitle melt xlab ylab
checking compiled code ... NOTE
File ‘PhaseType/libs/PhaseType.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘LJMA_arms.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
photobiologyInOut (0.4.12)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiologyinout/
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Read 3 items
Read 16 items
Quitting from lines 180-181 (user-guide.Rnw)
Error: processing vignette 'user-guide.Rnw' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyLamps (0.4.1)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiologylamps/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 41-43 (data-catalogue.Rmd)
Error: processing vignette 'data-catalogue.Rmd' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyLEDs (0.4.2)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiologyleds/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 50-52 (data-catalogue.Rmd)
Error: processing vignette 'data-catalogue.Rmd' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyPlants (0.4.0)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiologyplants
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 79-81 (dataplotsPlants.Rnw)
Error: processing vignette 'dataplotsPlants.Rnw' failed with diagnostics:
StatColorGuide was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
Phxnlme (1.0.0)
Maintainer: Chay Ngee Lim limxx356@umn.edu
0 errors | 0 warnings | 0 notes
phylopath (0.2.0)
Maintainer: Wouter van der Bijl wouter.van.der.bijl@zoologi.su.se
Bug reports: https://github.com/Ax3man/phylopath/issues
0 errors | 0 warnings | 0 notes
phylosim (3.0.2)
Maintainer: Botond Sipos sbotond@gmail.com
0 errors | 0 warnings | 0 notes
physiology (0.2.2)
Maintainer: Jack O. Wasey jack@jackwasey.com
Bug reports: https://github.com/jackwasey/physiology/issues
0 errors | 0 warnings | 0 notes
pid (0.36)
Maintainer: Kevin Dunn kevin.dunn@mcmaster.ca
Bug reports: https://bitbucket.org/kevindunn/r-pid
0 errors | 0 warnings | 0 notes
pinbasic (0.1.0)
Maintainer: Andreas Recktenwald a.recktenwald@mx.uni-saarland.de
0 errors | 0 warnings | 0 notes
pipe.design (0.4)
Maintainer: Michael Sweeting mjs212@medschl.cam.ac.uk
0 errors | 0 warnings | 0 notes
pitchRx (1.8.2)
Maintainer: Carson Sievert cpsievert1@gmail.com
Bug reports: http://github.com/cpsievert/pitchRx/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘ggsubplot’
PKgraph (1.7)
Maintainer: Xiaoyong Sun johnsunx1@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘rggobi’
Depends: includes the non-default packages:
‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘lattice’ ‘rggobi’ ‘ggplot2’
‘proto’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
PKreport (1.5)
Maintainer: Xiaoyong Sun johnsunx1@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
PKadjust: no visible binding for global variable ‘jpeg’
PKadjust: no visible binding for global variable ‘bmp’
PKadjust: no visible binding for global variable ‘png’
PKadjust: no visible binding for global variable ‘tiff’
PKadjust: no visible binding for global variable ‘dev.new’
PKadjust: no visible global function definition for ‘dev.off’
PKfigure: no visible global function definition for ‘dev.cur’
PKfigure: no visible global function definition for ‘dev.off’
PKoutput: no visible global function definition for ‘heatmap’
... 17 lines ...
initialize,nonmem: no visible global function definition for
‘read.table’
Undefined global functions or variables:
bmp browseURL dev.cur dev.new dev.off formula heatmap jpeg
packageDescription png quantile read.table tiff
Consider adding
importFrom("grDevices", "bmp", "dev.cur", "dev.new", "dev.off", "jpeg",
"png", "tiff")
importFrom("stats", "formula", "heatmap", "quantile")
importFrom("utils", "browseURL", "packageDescription", "read.table")
to your NAMESPACE file.
planar (1.6)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 0 notes
PlasmaMutationDetector (1.5.2)
Maintainer: Yves Rozenholc yves.rozenholc@parisdescartes.fr
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘VariantAnnotation’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
platetools (0.0.2)
Maintainer: Scott Warchal s.warchal@sms.ed.ac.uk
0 errors | 0 warnings | 0 notes
playwith (0.9-54)
Maintainer: Felix Andrews felix@nfrac.org
1 error | 0 warnings | 1 note
checking whether package ‘playwith’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/playwith.Rcheck/00install.out’ for details.
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘latticist’
plotluck (1.0.0)
Maintainer: Stefan Schroedl stefan.schroedl@gmx.de
Bug reports: https://github.com/stefan-schroedl/plotluck/issues
1 error | 1 warning | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Factor variable price has too many levels (11602), truncating to 30
*** 2D box/violin plot ***
Factor variable rating has too many levels (91), truncating to 30
Error in match.arg(opts$geom, choices.geom) :
'arg' should be one of "spine", "heat", "auto"
Calls: test_check ... print -> plotluck -> determine.plot.type.1 -> match.arg
In addition: Warning message:
'switch' is deprecated.
Use 'strip.position' instead.
See help("Deprecated")
testthat results ================================================================
OK: 0 SKIPPED: 0 FAILED: 0
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 83-85 (plotluck.Rmd)
Error: processing vignette 'plotluck.Rmd' failed with diagnostics:
'sum' not defined for ordered factors
Execution halted
plotly (4.5.2)
Maintainer: Carson Sievert cpsievert1@gmail.com
Bug reports: https://github.com/ropensci/plotly/issues
2 errors | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘plotly-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: style
> ### Title: Modify trace(s)
> ### Aliases: style
>
> ### ** Examples
>
>
> p <- qplot(data = mtcars, wt, mpg, geom = c("point", "smooth"))
> # keep the hover info for points, but remove it for the line/ribbon
> style(p, hoverinfo = "none", traces = c(2, 3))
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: style ... plotly_build.gg -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Error: factor levels determine tick order (@test-cookbook-axes.R#28)
2. Error: ylim hides points (@test-cookbook-axes.R#36)
3. Error: scale_y(limits) hides points (@test-cookbook-axes.R#41)
4. Error: Using coord_cartesian zooms into the area (@test-cookbook-axes.R#49)
5. Error: A scatterplot with regular (linear) axis scaling (@test-cookbook-axes.R#64)
6. Error: log2 scaling of the y axis (with visually-equal spacing) (@test-cookbook-axes.R#71)
7. Error: log2 coordinate transformation with visually-diminishing spacing (@test-cookbook-axes.R#77)
8. Error: log2 transform with labels (@test-cookbook-axes.R#86)
9. Error: scale_y_log10 (@test-cookbook-axes.R#92)
1. ...
Error: testthat unit tests failed
Execution halted
plotMElm (0.1.4)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com
Bug reports: https://github.com/christophergandrud/plotMElm/issues
0 errors | 0 warnings | 0 notes
PlotPrjNetworks (1.0.0)
Maintainer: Joaquin Bienvenido Ordieres Mere j.ordieres@upm.es
0 errors | 0 warnings | 0 notes
plotROC (2.0.1)
Maintainer: Michael C Sachs sachsmc@gmail.com
Bug reports: http://github.com/sachsmc/plotROC/issues
0 errors | 0 warnings | 0 notes
plspm (0.4.7)
Maintainer: Gaston Sanchez gaston.stat@gmail.com
Bug reports: https://github.com/gastonstat/plspm/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
alpha: no visible binding for global variable ‘sd’
dummy.G: no visible global function definition for ‘var’
get_GQI: no visible binding for global variable ‘sd’
get_GQI: no visible global function definition for ‘cor’
get_PLSR: no visible binding for global variable ‘var’
get_PLSR: no visible global function definition for ‘var’
get_PLSR: no visible global function definition for ‘cor’
get_PLSR_NA : <anonymous>: no visible global function definition for
‘var’
... 52 lines ...
summary.plspm: no visible global function definition for ‘cor’
unidim: no visible binding for global variable ‘sd’
unidim: no visible global function definition for ‘princomp’
Undefined global functions or variables:
cor cov cutree lines lm na.omit par plot princomp pt quantile sd
title var
Consider adding
importFrom("graphics", "lines", "par", "plot", "title")
importFrom("stats", "cor", "cov", "cutree", "lm", "na.omit",
"princomp", "pt", "quantile", "sd", "var")
to your NAMESPACE file.
pmc (1.0.2)
Maintainer: Carl Boettiger cboettig@gmail.com
Bug reports: https://github.com/cboettig/pmc/issues
0 errors | 0 warnings | 0 notes
pogit (1.1.0)
Maintainer: Michaela Dvorzak m.dvorzak@gmx.at
0 errors | 0 warnings | 0 notes
pointRes (1.1.2)
Maintainer: Marieke van der Maaten-Theunissen marieketheunissen@gmail.com
0 errors | 0 warnings | 0 notes
pollstR (1.4.0)
Maintainer: Jeffrey B. Arnold jeffrey.arnold@gmail.com
Bug reports: https://github.com/rOpenGov/pollstR/issues
0 errors | 0 warnings | 0 notes
pomp (1.9)
Maintainer: Aaron A. King kingaa@umich.edu
Bug reports: http://github.com/kingaa/pomp/issues
0 errors | 0 warnings | 0 notes
PopED (0.3.1)
Maintainer: Andrew C. Hooker andrew.hooker@farmbio.uu.se
Bug reports: https://github.com/andrewhooker/PopED/issues
0 errors | 0 warnings | 0 notes
popEpi (0.4.0)
Maintainer: Joonas Miettinen joonas.miettinen@cancer.fi
Bug reports: https://github.com/WetRobot/popEpi/issues
0 errors | 0 warnings | 0 notes
PopGenReport (2.2.2)
Maintainer: Bernd Gruber bernd.gruber@canberra.edu.au
0 errors | 0 warnings | 0 notes
popgraph (1.4)
Maintainer: Rodney J. Dyer rjdyer@vcu.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
as.popgraph: no visible global function definition for ‘is’
centroid_distance: no visible global function definition for ‘is’
centroid_variance: no visible global function definition for ‘is’
centroid_variance: no visible global function definition for ‘cov’
decorate_graph: no visible global function definition for ‘is’
overlay_popgraph: no visible global function definition for ‘is’
overlay_popgraph: no visible global function definition for ‘lines’
overlay_popgraph: no visible global function definition for ‘points’
overlay_popgraph: no visible global function definition for ‘text’
... 12 lines ...
‘write.csv’
Undefined global functions or variables:
cor.test cov is lines points prcomp qchisq read.table text var
write.csv
Consider adding
importFrom("graphics", "lines", "points", "text")
importFrom("methods", "is")
importFrom("stats", "cor.test", "cov", "prcomp", "qchisq", "var")
importFrom("utils", "read.table", "write.csv")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
poppr (2.2.1)
Maintainer: Zhian N. Kamvar kamvarz@science.oregonstate.edu
Bug reports: https://github.com/grunwaldlab/poppr/issues
0 errors | 0 warnings | 0 notes
popReconstruct (1.0-4)
Maintainer: "Mark C. Wheldon" mwheldon@aut.ac.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
estMod.rinvGamma.mar29: no visible global function definition for
‘rgamma’
life.expectancy.stationary: no visible global function definition for
‘head’
life.expectancy.stationary: no visible global function definition for
‘tail’
log.lhood.mar29: no visible global function definition for ‘dnorm’
log.post.mar29: no visible global function definition for ‘dnorm’
popRecon.sampler: no visible global function definition for ‘rnorm’
popRecon.sampler: no visible global function definition for ‘runif’
Undefined global functions or variables:
dnorm head rgamma rnorm runif tail
Consider adding
importFrom("stats", "dnorm", "rgamma", "rnorm", "runif")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
PortfolioEffectHFT (1.7)
Maintainer: Andrey Kostin andrey.kostin@portfolioeffect.com
1 error | 0 warnings | 0 notes
checking whether package ‘PortfolioEffectHFT’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/PortfolioEffectHFT.Rcheck/00install.out’ for details.
powerbydesign (1.0.3)
Maintainer: Frank Papenmeier frank.papenmeier@uni-tuebingen.de
0 errors | 0 warnings | 0 notes
PPtreeViz (1.3.0)
Maintainer: Eun-Kyung Lee lee.eunk@gmail.com
0 errors | 0 warnings | 0 notes
prcbench (0.5.2)
Maintainer: Takaya Saito takaya.saito@outlook.com
Bug reports: https://github.com/takayasaito/prcbench/issues
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘prcbench-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ToolAUCCalculator
> ### Title: R6 class of the AUCCalculator tool
> ### Aliases: ToolAUCCalculator
> ### Keywords: datasets
>
> ### ** Examples
>
> ## Initialization
> toolauccalc <- ToolAUCCalculator$new()
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Error in rJava::.jinit() : JNI_GetCreatedJavaVMs returned -1
Calls: <Anonymous> ... .get_java_obj -> withVisible -> _f -> <Anonymous> -> .External
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Error: run_benchmark (@test_main_benchmark.R#32)
2. Error: run_benchmark: testset (@test_main_benchmark.R#58)
3. Error: run_benchmark: toolset (@test_main_benchmark.R#84)
4. Error: run_benchmark: times (@test_main_benchmark.R#131)
5. Error: run_benchmark: unit (@test_main_benchmark.R#166)
6. Error: run_evalcurve (@test_main_evalcurves.R#6)
7. Error: run_evalcurve: testset (@test_main_evalcurves.R#19)
8. Error: run_evalcurve: toolset (@test_main_evalcurves.R#32)
9. Error: run_evalcurve testscores (@test_main_evalcurves.R#57)
1. ...
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Quitting from lines 65-70 (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
JNI_GetCreatedJavaVMs returned -1
Execution halted
precintcon (2.3.0)
Maintainer: Lucas Venezian Povoa lucasvenez@gmail.com
Bug reports: https://github.com/lucasvenez/precintcon/issues
0 errors | 0 warnings | 0 notes
precrec (0.5.2)
Maintainer: Takaya Saito takaya.saito@outlook.com
Bug reports: https://github.com/takayasaito/precrec/issues
0 errors | 0 warnings | 0 notes
predictionInterval (1.0.0)
Maintainer: David Stanley dstanley@uoguelph.ca
0 errors | 0 warnings | 0 notes
predictmeans (0.99)
Maintainer: Dongwen Luo dongwen.luo@agresearch.co.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CookD: no visible global function definition for ‘update’
CookD: no visible global function definition for ‘model.frame’
CookD : <anonymous>: no visible global function definition for ‘update’
CookD: no visible global function definition for ‘dev.new’
CookD: no visible global function definition for ‘text’
CookD: no visible global function definition for ‘points’
Kmatrix: no visible global function definition for ‘slot’
Kmatrix: no visible global function definition for ‘model.matrix’
Kmatrix: no visible global function definition for ‘terms’
... 128 lines ...
"legend", "lines", "par", "plot", "points", "text", "title")
importFrom("methods", "slot")
importFrom("stats", "anova", "as.formula", "coef", "delete.response",
"family", "fitted", "formula", "ftable", "lm.influence",
"loess.smooth", "model.frame", "model.matrix", "na.omit",
"na.pass", "p.adjust", "ppoints", "predict", "pt", "ptukey",
"qnorm", "qqline", "qqnorm", "qt", "resid", "residuals",
"terms", "update", "vcov", "xtabs")
importFrom("utils", "edit")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
PredictTestbench (1.1.1)
Maintainer: Neeraj Bokde neerajdhanraj@gmail.com
Bug reports: https://github.com/neerajdhanraj/PredictTestbench/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 43-46 (my-vignette.Rmd)
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
argument "pred" is missing, with no default
Execution halted
PReMiuM (3.1.3)
Maintainer: Silvia Liverani liveranis@gmail.com
0 errors | 0 warnings | 0 notes
preprocomb (0.3.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com
Bug reports: https://github.com/mvattulainen/preprocomb/issues
0 errors | 0 warnings | 0 notes
preprosim (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com
Bug reports: https://github.com/mvattulainen/preprosim/issues
0 errors | 0 warnings | 0 notes
preproviz (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com
Bug reports: https://github.com/mvattulainen/preproviz/issues
0 errors | 0 warnings | 0 notes
preText (0.4.4)
Maintainer: Matthew J. Denny mdenny@psu.edu
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Missing or unexported object: ‘cowplot::switch_axis_position’
prevR (3.3)
Maintainer: Joseph Larmarange joseph.larmarange@ird.fr
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘sparr’
pRF (1.2)
Maintainer: Ankur Chakravarthy ankur.chakravarthy.10@ucl.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
primerTree (1.0.3)
Maintainer: Jim Hester james.f.hester@gmail.com
0 errors | 0 warnings | 0 notes
prism (0.0.7)
Maintainer: Hart Edmund Edmund.m.hart@gmail.com
Bug reports: http://github.com/ropensci/prism/issues
0 errors | 0 warnings | 0 notes
PRISMA (0.2-5)
Maintainer: Tammo Krueger tammokrueger@googlemail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
corpusToPrisma: no visible global function definition for
‘packageVersion’
estimateDimension : calcConfidence: no visible global function
definition for ‘qnorm’
filterDataByTestAndCor: no visible global function definition for
‘p.adjust’
plot.prismaDimension: no visible binding for global variable ‘var’
plotMatrixFactor: no visible global function definition for
‘as.dendrogram’
... 14 lines ...
Undefined global functions or variables:
as.dendrogram cutree dist gray hclust new p.adjust packageVersion
pnorm prcomp qnorm read.table rnorm var
Consider adding
importFrom("grDevices", "gray")
importFrom("methods", "new")
importFrom("stats", "as.dendrogram", "cutree", "dist", "hclust",
"p.adjust", "pnorm", "prcomp", "qnorm", "rnorm", "var")
importFrom("utils", "packageVersion", "read.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
productplots (0.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/productplots/issues
0 errors | 0 warnings | 0 notes
profileR (0.3-3)
Maintainer: Christopher David Desjardins cddesjardins@gmail.com
0 errors | 0 warnings | 0 notes
profr (0.3.1)
Maintainer: Hadley Wickham h.wickham@gmail.com
Bug reports: https://github.com/hadley/profr/issues
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘ggplot2’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
.simplify : <anonymous>: no visible binding for global variable ‘hist’
.simplify : <anonymous>: no visible binding for global variable ‘start’
.simplify: no visible binding for global variable ‘start’
.simplify: no visible binding for global variable ‘end’
ggplot.profr: no visible global function definition for ‘ggplot’
ggplot.profr: no visible global function definition for ‘geom_rect’
ggplot.profr: no visible global function definition for ‘aes’
ggplot.profr: no visible binding for global variable ‘start’
ggplot.profr: no visible binding for global variable ‘end’
... 9 lines ...
plot.profr: no visible binding for global variable ‘time’
plot.profr: no visible global function definition for ‘text’
profr: no visible global function definition for ‘Rprof’
Undefined global functions or variables:
Rprof aes end geom_rect geom_text ggplot hist plot rect
scale_x_continuous scale_y_continuous start text time
Consider adding
importFrom("graphics", "hist", "plot", "rect", "text")
importFrom("stats", "end", "start", "time")
importFrom("utils", "Rprof")
to your NAMESPACE file.
profvis (0.3.2)
Maintainer: Winston Chang winston@rstudio.com
0 errors | 0 warnings | 0 notes
ProgGUIinR (0.0-4)
Maintainer: John Verzani verzani@math.csi.cuny.edu
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘qtbase’
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
browseRGtk2Files: no visible global function definition for ‘gtkWindow’
browseRGtk2Files: no visible global function definition for ‘gtkVBox’
browseRGtk2Files: no visible global function definition for
‘gtkToolbar’
browseRGtk2Files: no visible global function definition for ‘gtkHPaned’
browseRGtk2Files: no visible global function definition for ‘gtkFrame’
browseRGtk2Files: no visible global function definition for
‘gtkTextView’
browseRGtk2Files: no visible global function definition for
... 168 lines ...
gtkScrolledWindow gtkSeparatorToolItem gtkStatusbar gtkTextBuffer
gtkTextView gtkToolButton gtkToolbar gtkTreeView gtkTreeViewColumn
gtkTypeGetSignals gtkVBox gtkVBoxNew gtkWindow gwindow help
rGtkDataFrame svalue svalue<- tcl tclvalue tkbind tkconfigure
tkdelete tkget tkgrid tkgrid.columnconfigure tkgrid.rowconfigure
tkinsert tkmenu tkpack tksee tkset tktag.add tktag.configure
tktag.remove tktext tktoplevel tkwm.title tkxview ttkbutton ttkframe
ttklabel ttkpanedwindow ttkscrollbar ttktreeview visible<-
Consider adding
importFrom("utils", "apropos", "help")
to your NAMESPACE file.
ProjectTemplate (0.7)
Maintainer: Kenton White jkentonwhite@gmail.com
Bug reports: https://github.com/johnmyleswhite/ProjectTemplate/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RODBC’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
proportion (1.2.3)
Maintainer: Rajeswaran Viswanathan v.rajeswaran@gmail.com
Bug reports: https://github.com/RajeswaranV/proportion/issues
0 errors | 1 warning | 1 note
checking sizes of PDF files under ‘inst/doc’ ... WARNING
‘gs+qpdf’ made some significant size reductions:
compacted ‘proportion.pdf’ from 689Kb to 387Kb
consider running tools::compactPDF(gs_quality = "ebook") on these files
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘PropCIs’, ‘BlakerCI’, ‘prevalence’
propr (2.0.4)
Maintainer: Thomas Quinn contacttomquinn@gmail.com
Bug reports: http://github.com/tpq/propr/issues
0 errors | 0 warnings | 0 notes
proteomics (0.2)
Maintainer: Thomas W. D. Möbius kontakt@thomasmoebius.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
addIonSatistics: no visible binding for global variable ‘median’
adjustOne: no visible binding for global variable ‘median’
attachModifications: no visible global function definition for
‘na.omit’
avrgLoadingCalculation: no visible binding for global variable ‘median’
channelResponses : estimate: no visible binding for global variable
‘var’
responseStatisics : func: no visible global function definition for
‘aggregate’
testing: no visible global function definition for ‘aov’
testingOneshot: no visible global function definition for ‘anova’
testingTukey: no visible global function definition for ‘TukeyHSD’
Undefined global functions or variables:
TukeyHSD aggregate anova aov median na.omit var
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov", "median",
"na.omit", "var")
to your NAMESPACE file.
PRROC (1.1)
Maintainer: Jan Grau grau@informatik.uni-halle.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
plot.PRROC: no visible global function definition for ‘hsv’
plot.PRROC: no visible global function definition for ‘grey’
plot.PRROC: no visible global function definition for ‘lcm’
plot.PRROC: no visible global function definition for ‘layout’
plot.PRROC: no visible global function definition for ‘plot’
plot.PRROC: no visible global function definition for ‘polygon’
plot.PRROC: no visible global function definition for ‘lines’
plot.PRROC: no visible global function definition for ‘segments’
plot.PRROC: no visible global function definition for ‘par’
plot.PRROC: no visible global function definition for ‘image’
plot.PRROC: no visible global function definition for ‘axis’
Undefined global functions or variables:
axis grey hsv image layout lcm lines par plot polygon segments
Consider adding
importFrom("grDevices", "grey", "hsv")
importFrom("graphics", "axis", "image", "layout", "lcm", "lines",
"par", "plot", "polygon", "segments")
to your NAMESPACE file.
PSAboot (1.1.4)
Maintainer: Jason Bryer jason@bryer.org
Bug reports: https://github.com/jbryer/PSAboot/issues
0 errors | 0 warnings | 0 notes
PSCBS (0.61.0)
Maintainer: Henrik Bengtsson henrikb@braju.com
Bug reports: https://github.com/HenrikBengtsson/PSCBS/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘DNAcopy’
Package suggested but not available for checking: ‘aroma.light’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
pscore (0.1-2)
Maintainer: Joshua F. Wiley jwiley.psych@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
mahalanobisComposite: no visible global function definition for
‘princomp’
prepareComposite: no visible global function definition for ‘cov’
winsorizor : f: no visible global function definition for ‘quantile’
Undefined global functions or variables:
cov princomp quantile
Consider adding
importFrom("stats", "cov", "princomp", "quantile")
to your NAMESPACE file.
psd (1.0-1)
Maintainer: Andrew J. Barbour andy.barbour@gmail.com
Bug reports: https://github.com/abarbour/psd/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ctap_loess.default: no visible global function definition for
‘loess.control’
lines.spec: no visible global function definition for ‘plot’
pgram_compare.amt: no visible global function definition for ‘as.ts’
pgram_compare.amt: no visible global function definition for
‘frequency’
pgram_compare.amt: no visible global function definition for
‘spec.pgram’
pgram_compare.amt: no visible global function definition for ‘par’
... 41 lines ...
abline acf as.ts frequency head is.ts layout legend lines lm
loess.control mtext par pchisq plot qchisq residuals spec.pgram start
tail title ts var
Consider adding
importFrom("graphics", "abline", "layout", "legend", "lines", "mtext",
"par", "plot", "title")
importFrom("stats", "acf", "as.ts", "frequency", "is.ts", "lm",
"loess.control", "pchisq", "qchisq", "residuals",
"spec.pgram", "start", "ts", "var")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
pseval (1.3.0)
Maintainer: Michael C Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘printr’
PTXQC (0.80.14)
Maintainer: Chris Bielow chris.bielow@mdc-berlin.de
Bug reports: https://github.com/cbielow/PTXQC/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
doc 3.5Mb
examples 2.3Mb
pwr (1.2-0)
Maintainer: Helios De Rosario helios.derosario@gmail.com
0 errors | 0 warnings | 0 notes
pxweb (0.6.3)
Maintainer: Mans Magnusson mons.magnusson@gmail.com
Bug reports: https://github.com/rOpenGov/pxweb/issues
0 errors | 0 warnings | 0 notes
QCAtools (0.2.2)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu
0 errors | 0 warnings | 0 notes
QCSimulator (0.0.1)
Maintainer: Tinniam V Ganeshtvganesh.85@gmail.com
0 errors | 0 warnings | 0 notes
qdap (2.2.5)
Maintainer: Tyler Rinker tyler.rinker@gmail.com
Bug reports: http://github.com/trinker/qdap/issues
1 error | 0 warnings | 0 notes
checking whether package ‘qdap’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/qdap.Rcheck/00install.out’ for details.
qgraph (1.4.0)
Maintainer: Sacha Epskamp mail@sachaepskamp.com
0 errors | 0 warnings | 0 notes
qicharts (0.5.1)
Maintainer: Jacob Anhoej jacob@anhoej.net
0 errors | 0 warnings | 0 notes
quadrupen (0.2-4)
Maintainer: Julien Chiquet julien.chiquet@genopole.cnrs.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
crossval: no visible global function definition for ‘modifyList’
stability: no visible global function definition for ‘modifyList’
stability : bloc.stability: no visible global function definition for
‘runif’
plot,cvpen: no visible binding for global variable ‘lambda1’
plot,cvpen: no visible binding for global variable ‘lambda2’
plot,cvpen: no visible global function definition for ‘quantile’
plot,cvpen: no visible binding for global variable ‘serr’
plot,cvpen: no visible binding for global variable ‘xval’
plot,cvpen: no visible binding for global variable ‘lambda.choice’
plot,quadrupen: no visible binding for global variable ‘coefficients’
plot,quadrupen: no visible binding for global variable ‘variables’
plot,quadrupen: no visible binding for global variable ‘var’
plot,quadrupen: no visible binding for global variable ‘coef’
plot,stability.path: no visible binding for global variable ‘variables’
plot,stability.path: no visible binding for global variable ‘var’
Undefined global functions or variables:
coef coefficients lambda.choice lambda1 lambda2 modifyList quantile
runif serr var variables xval
Consider adding
importFrom("stats", "coef", "coefficients", "quantile", "runif", "var")
importFrom("utils", "modifyList")
to your NAMESPACE file.
QualInt (1.0.0)
Maintainer: Lixi Yu lixi-yu@uiowa.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
alphaf: no visible global function definition for ‘pchisq’
alphaf: no visible global function definition for ‘dbinom’
conout: no visible global function definition for ‘sd’
ibgaout: no visible global function definition for ‘qnorm’
ibgaout: no visible global function definition for ‘pnorm’
plot.qualint: no visible global function definition for ‘qnorm’
powerval: no visible global function definition for ‘rnorm’
powerval: no visible global function definition for ‘qnorm’
powerval: no visible global function definition for ‘pnorm’
... 9 lines ...
surout: no visible global function definition for ‘tail’
surout: no visible global function definition for ‘coef’
Undefined global functions or variables:
coef dbinom gray pchisq plot pnorm qnorm rnorm sd tail
Consider adding
importFrom("grDevices", "gray")
importFrom("graphics", "plot")
importFrom("stats", "coef", "dbinom", "pchisq", "pnorm", "qnorm",
"rnorm", "sd")
importFrom("utils", "tail")
to your NAMESPACE file.
qualvar (0.1.0)
Maintainer: Joel Gombin joel.gombin@gmail.com
0 errors | 0 warnings | 0 notes
quanteda (0.9.8.5)
Maintainer: Kenneth Benoit kbenoit@lse.ac.uk
Bug reports: https://github.com/kbenoit/quanteda/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
as.dist, dist
The following object is masked from 'package:base':
as.matrix
testthat results ================================================================
OK: 240 SKIPPED: 1 FAILED: 2
1. Failure: test plot.kwic facet order parameter (@testPlots.R#70)
2. Failure: test plot.kwic keeps order of keywords passed (@testPlots.R#81)
Error: testthat unit tests failed
Execution halted
QuantumClone (0.16.8.19)
Maintainer: Paul Deveau paul.deveau@curie.fr
Bug reports: https://github.com/DeveauP/QuantumClone/issues
0 errors | 0 warnings | 0 notes
quickpsy (0.1.4)
Maintainer: Linares Daniel danilinares@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘quickpsy-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotcurves
> ### Title: Plot the curves
> ### Aliases: plotcurves
>
> ### ** Examples
>
> library(MPDiR) # contains the Vernier data
> fit <- quickpsy(Vernier, Phaseshift, NumUpward, N,
+ grouping = .(Direction, WaveForm, TempFreq), B = 5)
> plotcurves(fit)
Error: Aesthetics must be either length 1 or the same as the data (8): ymin, ymax, colour, x
Execution halted
quickReg (1.0.0)
Maintainer: Xikun Han hanxikun2014@163.com
Bug reports: Xikun Han hanxikun2014@163.com
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘PredictABEL’
qwraps2 (0.2.2)
Maintainer: Peter DeWitt dewittpe@gmail.com
0 errors | 0 warnings | 0 notes
R2admb (0.7.13)
Maintainer: Ben Bolker bolker@mcmaster.ca
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
AIC.admb: no visible global function definition for ‘deviance’
AIC.admb: no visible global function definition for ‘coef’
check_section : make_names: no visible global function definition for
‘na.omit’
compile_admb: no visible global function definition for ‘head’
confint.admb: no visible global function definition for ‘coef’
confint.admb: no visible global function definition for ‘qnorm’
confint.admb: no visible binding for global variable ‘quantile’
dat_write: no visible global function definition for ‘write.table’
... 18 lines ...
Consider adding
importFrom("stats", "coef", "deviance", "na.omit", "pnorm",
"printCoefmat", "qnorm", "quantile", "vcov")
importFrom("utils", "count.fields", "head", "read.table",
"write.table")
to your NAMESPACE file.
Found the following calls to attach():
File ‘R2admb/R/check_section.R’:
attach(R_list, name = "R_list", warn.conflicts = FALSE)
See section ‘Good practice’ in ‘?attach’.
r2glmm (0.1.0)
Maintainer: Byron Jaeger byron.jaeger@gmail.com
Bug reports: https://github.com/bcjaeger/r2glmm/issues
0 errors | 0 warnings | 0 notes
R6 (2.2.0)
Maintainer: Winston Chang winston@stdout.org
0 errors | 0 warnings | 0 notes
radiant.basics (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu
Bug reports: https://github.com/radiant-rstats/radiant.basics/issues
0 errors | 0 warnings | 0 notes
radiant.data (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu
Bug reports: https://github.com/radiant-rstats/radiant.data/issues
0 errors | 0 warnings | 0 notes
radiant.model (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu
Bug reports: https://github.com/radiant-rstats/radiant.model/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘radiant.model-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.model.predict
> ### Title: Plot method for model.predict functions
> ### Aliases: plot.model.predict
>
> ### ** Examples
>
> regress("diamonds", "price", c("carat","clarity")) %>%
+ predict(pred_cmd = "carat = 1:10") %>%
+ plot(xvar = "carat")
> logistic("titanic", "survived", c("pclass","sex","age"), lev = "Yes") %>%
+ predict(pred_cmd="pclass=levels(pclass), sex=levels(sex), age=seq(0,100,20)") %>%
+ plot(xvar = "age", color = "sex", facet_col = "pclass")
Error in rep(yes, length.out = length(ans)) :
attempt to replicate an object of type 'closure'
Calls: %>% ... <Anonymous> -> plot -> plot.model.predict -> ifelse
Execution halted
radiant.multivariate (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu
Bug reports:
https://github.com/radiant-rstats/radiant.multivariate/issues
0 errors | 0 warnings | 0 notes
rags2ridges (2.1.1)
Maintainer: Carel F.W. Peeters cf.peeters@vumc.nl
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘KEGGgraph’ ‘graph’
ragtop (0.5)
Maintainer: Brian K. Boonstra ragtop@boonstra.org
0 errors | 0 warnings | 0 notes
raincpc (0.4)
Maintainer: Gopi Goteti my.ration.shop@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cpc_get_rawdata: no visible global function definition for
‘download.file’
Undefined global functions or variables:
download.file
Consider adding
importFrom("utils", "download.file")
to your NAMESPACE file.
rAltmetric (0.6)
Maintainer: Karthik Ram karthik.ram@gmail.com
Bug reports: https://github.com/ropensci/rAltmetric/issues/
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
altmetric_data: no visible global function definition for ‘is’
plot.altmetric: no visible global function definition for ‘is’
Undefined global functions or variables:
is
Consider adding
importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
RAM (1.2.1.3)
Maintainer: Wen Chen Wen.Chen@agr.gc.ca
Bug reports: https://bitbucket.org/Wen_Chen/ram_releases/issues/
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Heatplus’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘Heatplus’
randomizeR (1.3)
Maintainer: Diane Uschner duschner@ukaachen.de
0 errors | 0 warnings | 0 notes
randomUniformForest (1.1.5)
Maintainer: Saip Ciss saip.ciss@wanadoo.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
HuberDist: no visible global function definition for ‘median’
MDSscale: no visible global function definition for ‘plot’
OOBquantiles : <anonymous>: no visible global function definition for
‘quantile’
OOBquantiles : <anonymous>: no visible global function definition for
‘sd’
OOBquantiles: no visible global function definition for ‘quantile’
OOBquantiles: no visible global function definition for ‘plot’
bCICore: no visible global function definition for ‘quantile’
... 185 lines ...
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "graphics.off",
"heat.colors")
importFrom("graphics", "abline", "barplot", "grid", "legend",
"mosaicplot", "par", "persp", "plot", "points", "title")
importFrom("stats", "aggregate", "cor", "dist", "kmeans", "lm",
"median", "model.frame", "model.matrix", "model.response",
"na.omit", "pbinom", "predict", "qnorm", "quantile",
"rnorm", "runif", "sd")
importFrom("utils", "head", "memory.limit")
to your NAMESPACE file.
rangeMapper (0.3-0)
Maintainer: Mihai Valcu valcu@orn.mpg.de
0 errors | 0 warnings | 0 notes
rangemodelR (1.0.1)
Maintainer: Aniruddha Marathe aniruddha.pravin.marathe@gmail.com
0 errors | 0 warnings | 0 notes
raptr (0.0.1)
Maintainer: Jeffrey O Hanson jeffrey.hanson@uqconnect.edu.au
Bug reports: https://github.com/jeffreyhanson/raptr/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘hypervolume’ ‘gdalUtils’
Packages suggested but not available for checking: ‘gurobi’ ‘rgurobi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
rasterVis (0.40)
Maintainer: Oscar Perpinan Lamigueiro oscar.perpinan@gmail.com
Bug reports: https://github.com/oscarperpinan/rastervis/issues
0 errors | 0 warnings | 0 notes
rattle (4.1.0)
Maintainer: Graham Williams Graham.Williams@togaware.com
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘graph’ ‘RBGL’ ‘rggobi’ ‘RODBC’ ‘pkgDepTools’ ‘Rgraphviz’
checking installed package size ... NOTE
installed size is 6.8Mb
sub-directories of 1Mb or more:
data 2.5Mb
etc 1.9Mb
po 1.2Mb
checking dependencies in R code ... NOTE
(R:37892): Gtk-WARNING **: gtk_disable_setlocale() must be called before gtk_init()
raw (0.1.2)
Maintainer: Brian A. Fannin FanninQED@yahoo.com
0 errors | 0 warnings | 0 notes
rbefdata (0.3.5)
Maintainer: Claas-Thido Pfaff claas-thido.pfaff@idiv-biodiversity.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bef.get.attachments: no visible global function definition for
‘read.csv’
bef.get.attachments: no visible global function definition for
‘flush.console’
bef.get.attachments_for: no visible global function definition for
‘read.csv’
bef.get.attachments_for: no visible global function definition for
‘flush.console’
bef.get.categories_for: no visible binding for global variable ‘id’
... 30 lines ...
bef.portal.get.datasets.for_keyword : <anonymous>: no visible global
function definition for ‘read.csv’
bef.portal.get.datasets.for_proposal: no visible global function
definition for ‘read.csv’
upload_file: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
browseURL flush.console id read.csv write.csv
Consider adding
importFrom("utils", "browseURL", "flush.console", "read.csv",
"write.csv")
to your NAMESPACE file.
rbison (0.5.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rbison/issues
0 errors | 0 warnings | 0 notes
rbokeh (0.5.0)
Maintainer: Ryan Hafen rhafen@gmail.com
Bug reports: https://github.com/bokeh/rbokeh/issues
0 errors | 0 warnings | 0 notes
rchess (0.1)
Maintainer: Joshua Kunst jbkunst@gmail.com
Bug reports: https://github.com/jbkunst/rchess/issues
0 errors | 0 warnings | 0 notes
rclinicaltrials (1.4.1)
Maintainer: Michael C Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
clinicaltrials_download: no visible global function definition for
‘unzip’
Undefined global functions or variables:
unzip
Consider adding
importFrom("utils", "unzip")
to your NAMESPACE file.
RcmdrPlugin.KMggplot2 (0.2-3)
Maintainer: Triad sou. triadsou@gmail.com
0 errors | 0 warnings | 0 notes
RcmdrPlugin.MA (0.0-2)
Maintainer: A. C. Del Re acdelre@gmail.com
0 errors | 0 warnings | 0 notes
RCMIP5 (1.2.0)
Maintainer: Kathe Todd-Brown ktoddbrown@gmail.com
0 errors | 0 warnings | 0 notes
rddtools (0.4.0)
Maintainer: Bastiaan Quast bquast@gmail.com
Bug reports: https://github.com/bquast/RDDtools/issues
0 errors | 0 warnings | 0 notes
RDML (0.9-1)
Maintainer: Konstantin A. Blagodatskikh k.blag@yandex.ru
0 errors | 0 warnings | 0 notes
rdpla (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rdpla/issues
0 errors | 0 warnings | 0 notes
RDS (0.7-7)
Maintainer: Mark S. Handcock handcock@stat.ucla.edu
0 errors | 0 warnings | 0 notes
reda (0.2.1)
Maintainer: Wenjie Wang wenjie.2.wang@uconn.edu
Bug reports: https://github.com/wenjie2wang/reda/issues
0 errors | 0 warnings | 0 notes
refund (0.1-16)
Maintainer: Lei Huang huangracer@gmail.com
0 errors | 0 warnings | 0 notes
refund.shiny (0.2.0)
Maintainer: Julia Wrobel jw3134@cumc.columbia.edu
0 errors | 0 warnings | 0 notes
rem (1.1.2)
Maintainer: Laurence Brandenberger laurence.brandenberger@eawag.ch
0 errors | 0 warnings | 0 notes
repijson (0.1.0)
Maintainer: Andy South southandy@gmail.com
0 errors | 0 warnings | 0 notes
replicationInterval (2.0.1)
Maintainer: David Stanley dstanley@uoguelph.ca
0 errors | 0 warnings | 0 notes
ReporteRs (0.8.7)
Maintainer: David Gohel david.gohel@lysis-consultants.fr
Bug reports: https://github.com/davidgohel/ReporteRs/issues
1 error | 0 warnings | 0 notes
checking whether package ‘ReporteRs’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ReporteRs.Rcheck/00install.out’ for details.
reproducer (0.1.6)
Maintainer: Lech Madeyski lech.madeyski@gmail.com
0 errors | 0 warnings | 0 notes
reval (2.0.0)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com
Bug reports: https://github.com/mkoohafkan/reval/issues
0 errors | 0 warnings | 0 notes
rex (1.1.1)
Maintainer: Jim Hester james.f.hester@gmail.com
Bug reports: https://github.com/kevinushey/rex/issues
0 errors | 0 warnings | 0 notes
rfigshare (0.3.7)
Maintainer: Carl Boettiger cboettig@gmail.com
Bug reports: https://github.com/ropensci/rfigshare/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
fs_author_ids : <anonymous>: no visible global function definition for
‘select.list’
fs_download : <anonymous>: no visible global function definition for
‘download.file’
Undefined global functions or variables:
download.file select.list
Consider adding
importFrom("utils", "download.file", "select.list")
to your NAMESPACE file.
RFinfer (0.2.0)
Maintainer: Cole Brokamp cole.brokamp@gmail.com
Bug reports: https://github.com/cole-brokamp/RFinfer/issues
0 errors | 0 warnings | 0 notes
rfisheries (0.2)
Maintainer: Karthik Ram karthik.ram@gmail.com
Bug reports: http://www.github.com/ropensci/rfisheries/issues/new
0 errors | 0 warnings | 0 notes
RFmarkerDetector (1.0.1)
Maintainer: Piergiorgio Palla piergiorgio.palla@diee.unica.it
0 errors | 0 warnings | 0 notes
rfordummies (0.1.2)
Maintainer: Andrie de Vries apdevries@gmail.com
Bug reports: https://github.com/andrie/rfordummies/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘rfordummies-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: saveElements
> ### Title: Saves a copy of the periodic table of elements as excel or csv
> ### file.
> ### Aliases: saveElements
>
> ### ** Examples
>
> saveElements(file.path(tempdir(), "elements.xlsx"))
Loading required namespace: XLConnect
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Failed with error: ‘.onLoad failed in loadNamespace() for 'XLConnectJars', details:
call: .jinit()
error: JNI_GetCreatedJavaVMs returned -1
’
Error in saveElements(file.path(tempdir(), "elements.xlsx")) :
Unable to create excel file. Install the XLConnect package and try again.
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
rfPermute (2.1.5)
Maintainer: Eric Archer eric.archer@noaa.gov
Bug reports: https://github.com/EricArcher/rfPermute/issues
0 errors | 0 warnings | 0 notes
rgbif (0.9.5)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rgbif/issues
0 errors | 0 warnings | 0 notes
RGraphics (2.0-14)
Maintainer: Paul Murrell paul@stat.auckland.ac.nz
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘graph’ ‘hyperdraw’ ‘hypergraph’ ‘rggobi’ ‘Rgraphviz’ ‘SVGAnnotation’
checking installed package size ... NOTE
installed size is 9.6Mb
sub-directories of 1Mb or more:
extra 9.4Mb
checking dependencies in R code ... NOTE
(R:44269): Gtk-WARNING **: gtk_disable_setlocale() must be called before gtk_init()
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
RImagePalette (0.1.1)
Maintainer: Joel Carlson jnkcarlson@gmail.com
0 errors | 0 warnings | 0 notes
rinat (0.1.4)
Maintainer: Edmund Hart edmund.m.hart@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
get_inat_obs: no visible global function definition for ‘read.csv’
get_inat_obs_project: no visible global function definition for
‘read.csv’
get_inat_obs_user: no visible global function definition for ‘read.csv’
inat_handle: no visible binding for global variable ‘data’
Undefined global functions or variables:
data read.csv
Consider adding
importFrom("utils", "data", "read.csv")
to your NAMESPACE file.
rivr (1.2)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com
Bug reports: https://github.com/mkoohafkan/rivr/issues
0 errors | 0 warnings | 0 notes
RJafroc (0.1.1)
Maintainer: Xuetong Zhai xuetong.zhai@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘RJafroc’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/RJafroc.Rcheck/00install.out’ for details.
RmarineHeatWaves (0.13.1)
Maintainer: Albertus J. Smit albertus.smit@gmail.com
0 errors | 0 warnings | 0 notes
rmcfs (1.1.2)
Maintainer: Michal Draminski mdramins@ipipan.waw.pl
1 error | 0 warnings | 0 notes
checking whether package ‘rmcfs’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rmcfs.Rcheck/00install.out’ for details.
rmetasim (3.0.5)
Maintainer: Allan Strand stranda@cofc.edu
0 errors | 0 warnings | 0 notes
rms (5.0-0)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
RndTexExams (1.4)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
rnoaa (0.6.5)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: http://www.github.com/ropensci/rnoaa/issues
0 errors | 0 warnings | 0 notes
rnpn (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
0 errors | 0 warnings | 0 notes
rnrfa (1.2)
Maintainer: Claudia Vitolo cvitolodev@gmail.com
Bug reports: https://github.com/cvitolo/rnrfa/issues
0 errors | 0 warnings | 0 notes
robCompositions (2.0.2)
Maintainer: Matthias Templ templ@tuwien.ac.at
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in warn_if_args_exist(list(...)) :
Extra arguments: 'colour', 'alpha', 'shape' are being ignored. If these are meant to be aesthetics, submit them using the 'mapping' variable within ggpairs with ggplot2::aes or ggplot2::aes_string.
Warning: `panel.margin` is deprecated. Please use `panel.spacing` property instead
Quitting from lines 905-906 (imputation.Rnw)
Error: processing vignette 'imputation.Rnw' failed with diagnostics:
only defined on a data frame with all numeric variables
Execution halted
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘StatDA’
robmed (0.1.1)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 0 notes
robustbase (0.92-6)
Maintainer: Martin Maechler maechler@stat.math.ethz.ch
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘robustX’
RobustEM (1.0)
Maintainer: Aishat Aloba adetokaloba@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cluster_em_outlier: no visible global function definition for ‘qchisq’
jth_dsty: no visible global function definition for ‘mahalanobis’
k_means: no visible global function definition for ‘kmeans’
mix_rcm: no visible global function definition for ‘median’
Undefined global functions or variables:
kmeans mahalanobis median qchisq
Consider adding
importFrom("stats", "kmeans", "mahalanobis", "median", "qchisq")
to your NAMESPACE file.
robustHD (0.5.1)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 0 notes
robustlmm (1.8)
Maintainer: Manuel Koller koller.manuel@gmail.com
0 errors | 0 warnings | 0 notes
rollply (0.5.0)
Maintainer: Alexandre Genin alex@lecairn.org
Bug reports: https://github.com/alexgenin/rollply
0 errors | 0 warnings | 0 notes
ropenaq (0.1.3)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se
Bug reports: http://github.com/ropenscilabs/ropenaq/issues
0 errors | 0 warnings | 0 notes
rorutadis (0.4.1)
Maintainer: Krzysztof Ciomek k.ciomek@gmail.com
0 errors | 0 warnings | 0 notes
rotations (1.5)
Maintainer: Bryan Stanfill bstanfill2003@gmail.com
Bug reports: https://github.com/stanfill/rotationsC/issues
0 errors | 0 warnings | 0 notes
rpdo (0.2.0)
Maintainer: Joe Thorley joe@poissonconsulting.ca
0 errors | 0 warnings | 0 notes
rpf (0.53)
Maintainer: Joshua Pritikin jpritikin@pobox.com
0 errors | 0 warnings | 0 notes
rplexos (1.1.8)
Maintainer: Clayton Barrows clayton.barrows@nrel.gov
Bug reports: https://github.com/NREL/rplexos/issues
0 errors | 0 warnings | 0 notes
rplos (0.6.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rplos/issues
0 errors | 0 warnings | 0 notes
RPPanalyzer (1.4.3)
Maintainer: Astrid Wachter astrid.wachter@med.uni-goettingen.de
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘limma’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
rPref (1.1)
Maintainer: Patrick Roocks mail@p-roocks.de
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘graph’ ‘Rgraphviz’
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
rprev (0.2.2)
Maintainer: Stuart Lacy stuart.lacy@york.ac.uk
0 errors | 0 warnings | 0 notes
rpsftm (1.0.1)
Maintainer: Simon Bond simon.bond@addenbrookes.nhs.uk
0 errors | 0 warnings | 0 notes
rrepast (0.5.0)
Maintainer: Antonio Prestes Garcia antonio.pgarcia@alumnos.upm.es
1 error | 0 warnings | 0 notes
checking whether package ‘rrepast’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rrepast.Rcheck/00install.out’ for details.
RSA (0.9.10)
Maintainer: Felix Schönbrodt felix@nicebread.de
0 errors | 1 warning | 0 notes
checking whether package ‘RSA’ can be installed ... WARNING
Found the following significant warnings:
Warning: loading Rplot failed
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/RSA.Rcheck/00install.out’ for details.
rSARP (1.0.0)
Maintainer: John Hutcheson jacknx8a@gmail.com
0 errors | 0 warnings | 0 notes
RSDA (1.3)
Maintainer: Oldemar Rodriguez oldemar.rodriguez@ucr.ac.cr
0 errors | 0 warnings | 0 notes
rSPACE (1.2.0)
Maintainer: Martha Ellis martha.ellis@gmail.com
Bug reports: http://github.com/mmellis/rSPACE/issues
0 errors | 0 warnings | 0 notes
RSSL (0.6.1)
Maintainer: Jesse Krijthe jkrijthe@gmail.com
Bug reports: http://www.github.com/jkrijthe/RSSL
0 errors | 0 warnings | 0 notes
rstan (2.12.1)
Maintainer: Ben Goodrich benjamin.goodrich@columbia.edu
Bug reports: https://github.com/stan-dev/rstan/issues/
1 error | 0 warnings | 0 notes
checking whether package ‘rstan’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rstan.Rcheck/00install.out’ for details.
rstanarm (2.12.1)
Maintainer: Ben Goodrich benjamin.goodrich@columbia.edu
Bug reports: https://github.com/stan-dev/rstanarm/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘rstanarm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.stanreg
> ### Title: Plot method for stanreg objects
> ### Aliases: plot.stanreg
>
> ### ** Examples
... 75 lines ...
> # Intervals and point estimates
> plot(fit) +
+ ggplot2::ggtitle("Posterior medians \n with 80% and 95% credible intervals")
'pars' not specified. Showing first 10 parameters by default.
ci_level: 0.8 (80% intervals)
outer_level: 0.95 (95% intervals)
Error in if (e1$inherit.blank) return(e2) else return(e1) :
argument is of length zero
Calls: <Anonymous> ... FUN -> element_render -> calc_element -> Reduce -> f
Execution halted
** found \donttest examples: check also with --run-donttest
checking installed package size ... NOTE
installed size is 8.7Mb
sub-directories of 1Mb or more:
doc 1.3Mb
libs 6.6Mb
RStoolbox (0.1.6)
Maintainer: Benjamin Leutner benjamin.leutner@uni-wuerzburg.de
Bug reports: https://github.com/bleutner/RStoolbox/issues
0 errors | 0 warnings | 0 notes
rsvd (0.6)
Maintainer: N. Benjamin Erichson nbe@st-andrews.ac.uk
Bug reports: https://github.com/Benli11/rSVD
0 errors | 0 warnings | 0 notes
rsvg (1.0)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu
Bug reports: https://github.com/jeroenooms/rsvg/issues
1 error | 0 warnings | 0 notes
checking whether package ‘rsvg’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rsvg.Rcheck/00install.out’ for details.
rtematres (0.2)
Maintainer: Claas-Thido Pfaff claas-thido.pfaff@idiv-biodiversity.de
0 errors | 0 warnings | 0 notes
rtf (0.4-11)
Maintainer: Michael E. Schaffer mschaff@gmail.com
0 errors | 0 warnings | 2 notes
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
addHeader.RTF addNewLine.RTF addPageBreak.RTF addParagraph.RTF
addPlot.RTF addPng.RTF addSessionInfo.RTF addTOC.RTF addTable.RTF
addText.RTF addTrellisObject.RTF decreaseIndent.RTF done.RTF
endParagraph.RTF increaseIndent.RTF setFontSize.RTF
startParagraph.RTF view.RTF
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
.forest.plot: no visible global function definition for ‘par’
.forest.plot: no visible global function definition for ‘plot’
.forest.plot: no visible global function definition for ‘abline’
.forest.plot: no visible global function definition for ‘arrows’
.forest.plot: no visible global function definition for ‘points’
.forest.plot.scale: no visible global function definition for ‘par’
.forest.plot.scale: no visible global function definition for ‘plot’
.forest.plot.scale: no visible global function definition for ‘axTicks’
.forest.plot.scale : <anonymous>: no visible global function definition
... 9 lines ...
addSessionInfo.RTF: no visible global function definition for
‘sessionInfo’
Undefined global functions or variables:
abline arrows axTicks dev.off lines par plot png points sessionInfo
text
Consider adding
importFrom("grDevices", "dev.off", "png")
importFrom("graphics", "abline", "arrows", "axTicks", "lines", "par",
"plot", "points", "text")
importFrom("utils", "sessionInfo")
to your NAMESPACE file.
rtide (0.0.2)
Maintainer: Joe Thorley joe@poissonconsulting.ca
Bug reports: https://github.com/poissonconsulting/rtide/issues
0 errors | 0 warnings | 0 notes
rtimes (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropengov/rtimes/issues
0 errors | 0 warnings | 0 notes
rtip (1.0.0)
Maintainer: Angel Berihuete angel.berihuete@uca.es
0 errors | 0 warnings | 0 notes
RtutoR (0.3)
Maintainer: Anup Nair nairanup50695@gmail.com
0 errors | 0 warnings | 0 notes
rvertnet (0.5.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rvertnet/issues
0 errors | 0 warnings | 0 notes
rWBclimate (0.1.3)
Maintainer: Edmund Hart edmund.m.hart@gmail.com
Bug reports: http://github.com/ropensci/rWBclimate/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
check_ISO_code: no visible binding for global variable ‘NoAm_country’
check_ISO_code: no visible binding for global variable ‘SoAm_country’
check_ISO_code: no visible binding for global variable ‘Oceana_country’
check_ISO_code: no visible binding for global variable ‘Africa_country’
check_ISO_code: no visible binding for global variable ‘Asia_country’
check_ISO_code: no visible binding for global variable ‘Eur_country’
climate_map: no visible binding for global variable ‘data’
date_correct: no visible global function definition for ‘tail’
Undefined global functions or variables:
Africa_country Asia_country Eur_country NoAm_country Oceana_country
SoAm_country data tail
Consider adding
importFrom("utils", "data", "tail")
to your NAMESPACE file.
rwirelesscom (1.4.3)
Maintainer: Alberto Gutierrez algutier1@gmail.com
0 errors | 0 warnings | 0 notes
rwty (1.0.1)
Maintainer: Dan Warren dan.l.warren@gmail.com
0 errors | 0 warnings | 0 notes
ryouready (0.4)
Maintainer: Mark Heckmann heckmann.mark@gmail.com
0 errors | 0 warnings | 0 notes
Rz (0.9-1)
Maintainer: Masahiro Hayashi rinm884@gmail.com
0 errors | 1 warning | 2 notes
checking dependencies in R code ... WARNING
'library' or 'require' call to ‘vcd’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘foreign’ ‘ggplot2’ ‘grid’ ‘psych’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Unexported object imported by a ':::' call: ‘foreign:::adQuote’
See the note in ?`:::` about the use of this operator.
Including base/recommended package(s):
‘foreign’
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
summary.CrossTable
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
calc.hist.breaks: no visible global function definition for
‘nclass.Sturges’
calc.hist.breaks: no visible global function definition for ‘nclass.FD’
calc.hist.breaks: no visible global function definition for
‘nclass.scott’
check.class: no visible global function definition for ‘as.formula’
gtkColorSelectionForPlotGetColor: no visible global function definition
for ‘rgb’
gtkColorSelectionWidgetNew: no visible global function definition for
... 9 lines ...
write.spss: no visible global function definition for ‘write.table’
write.stata: no visible global function definition for ‘write.table’
Undefined global functions or variables:
addmargins as.formula assocstats colors localeToCharset nclass.FD
nclass.Sturges nclass.scott rgb theme_grey write.table
Consider adding
importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
"nclass.scott", "rgb")
importFrom("stats", "addmargins", "as.formula")
importFrom("utils", "localeToCharset", "write.table")
to your NAMESPACE file.
sadists (0.2.2)
Maintainer: Steven E. Pav shabbychef@gmail.com
Bug reports: https://github.com/shabbychef/sadists/issues
0 errors | 0 warnings | 0 notes
saeRobust (0.1.0)
Maintainer: Sebastian Warnholz Sebastian.Warnholz@fu-berlin.de
Bug reports: https://github.com/wahani/saeRobust/issues
0 errors | 0 warnings | 0 notes
saeSim (0.8.0)
Maintainer: Sebastian Warnholz Sebastian.Warnholz@fu-berlin.de
Bug reports: https://github.com/wahani/saeSim/issues
0 errors | 0 warnings | 0 notes
SamplerCompare (1.2.7)
Maintainer: Madeleine Thompson madeleineth@gmail.com
0 errors | 0 warnings | 0 notes
sand (1.0.2)
Maintainer: Gabor Csardi csardi.gabor@gmail.com
Bug reports: https://github.com/kolaczyk/sand/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘GO.db’ ‘GOstats’ ‘org.Sc.sgd.db’
checking R code for possible problems ... NOTE
.run_chunk: no visible global function definition for ‘capture.output’
install_sand_packages: no visible global function definition for
‘packageDescription’
set_chapter: no visible global function definition for ‘sessionInfo’
Undefined global functions or variables:
capture.output packageDescription sessionInfo
Consider adding
importFrom("utils", "capture.output", "packageDescription",
"sessionInfo")
to your NAMESPACE file.
scanstatistics (0.1.0)
Maintainer: Benjamin Kjellson benjak@math.su.se
Bug reports: https://github.com/BenjaK/scanstatistics/issues
0 errors | 0 warnings | 0 notes
scdhlm (0.3)
Maintainer: James Pustejovsky jepusto@gmail.com
Bug reports: https://github.com/jepusto/scdhlm/issues
0 errors | 0 warnings | 0 notes
SCGLR (2.0.3)
Maintainer: Guillaume Cornu gcornu@cirad.fr
0 errors | 0 warnings | 0 notes
SciencesPo (1.4.1)
Maintainer: Daniel Marcelino dmarcelino@live.com
Bug reports: http://github.com/danielmarcelino/SciencesPo/issues
0 errors | 0 warnings | 0 notes
scmamp (0.2.55)
Maintainer: Borja Calvo borja.calvo@ehu.eus
Bug reports: https://github.com/b0rxa/scmamp/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘Rgraphviz’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
SDaA (0.1-3)
Maintainer: Tobias Verbeke tobias.verbeke@openanalytics.eu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
lahiri.design: no visible global function definition for ‘runif’
Undefined global functions or variables:
runif
Consider adding
importFrom("stats", "runif")
to your NAMESPACE file.
sdcMicro (4.6.1)
Maintainer: Matthias Templ matthias.templ@gmail.com
0 errors | 0 warnings | 0 notes
SDEFSR (0.7.1.0)
Maintainer: Angel M. Garcia amgv0009@red.ujaen.es
0 errors | 0 warnings | 0 notes
sdmvspecies (0.3.2)
Maintainer: Xiaoquan Kong u1mail2me@gmail.com
Bug reports: https://github.com/howl-anderson/sdmvspecies/issues
0 errors | 0 warnings | 0 notes
season (0.3-5)
Maintainer: Adrian Barnett a.barnett@qut.edu.au
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
aaft: no visible global function definition for ‘rnorm’
aaft: no visible global function definition for ‘runif’
casecross: no visible global function definition for ‘as.formula’
casecross: no visible global function definition for ‘model.frame’
casecross: no visible binding for global variable ‘na.omit’
ciPhase: no visible global function definition for ‘quantile’
cipolygon: no visible global function definition for ‘polygon’
cosinor: no visible global function definition for ‘gaussian’
cosinor: no visible global function definition for ‘as.formula’
... 59 lines ...
qnorm quantile relevel resid residuals rgamma rnorm rug runif sd text
time
Consider adding
importFrom("grDevices", "gray")
importFrom("graphics", "axis", "box", "hist", "lines", "par", "plot",
"points", "polygon", "rug", "text")
importFrom("stats", "acf", "as.formula", "cpgram", "fitted",
"gaussian", "glm", "median", "model.frame", "na.omit",
"pchisq", "qchisq", "qnorm", "quantile", "relevel", "resid",
"residuals", "rgamma", "rnorm", "runif", "sd", "time")
to your NAMESPACE file.
SEERaBomb (2016.1)
Maintainer: Tomas Radivoyevitch radivot@ccf.org
1 error | 0 warnings | 0 notes
checking whether package ‘SEERaBomb’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/SEERaBomb.Rcheck/00install.out’ for details.
seewave (2.0.5)
Maintainer: Jerome Sueur sueur@mnhn.fr
1 error | 0 warnings | 0 notes
checking whether package ‘seewave’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/seewave.Rcheck/00install.out’ for details.
selfea (1.0.1)
Maintainer: Lang Ho Lee langholee@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
get_statistics_from_file: no visible global function definition for
‘read.csv’
glm_anova: no visible global function definition for ‘aov’
glm_anova: no visible global function definition for ‘glm’
glm_anova: no visible global function definition for ‘gaussian’
glm_anova: no visible global function definition for ‘anova’
glm_anova: no visible global function definition for ‘quasipoisson’
glm_anova: no visible global function definition for ‘sd’
glm_anova: no visible global function definition for ‘p.adjust’
ttest_cohens_d: no visible global function definition for ‘t.test’
ttest_cohens_d: no visible global function definition for ‘sd’
Undefined global functions or variables:
anova aov gaussian glm p.adjust quasipoisson read.csv sd t.test
Consider adding
importFrom("stats", "anova", "aov", "gaussian", "glm", "p.adjust",
"quasipoisson", "sd", "t.test")
importFrom("utils", "read.csv")
to your NAMESPACE file.
SemiParBIVProbit (3.8)
Maintainer: Giampiero Marra giampiero.marra@ucl.ac.uk
0 errors | 0 warnings | 0 notes
sensiPhy (0.5.0)
Maintainer: Gustavo Paterno paternogbc@gmail.com
Bug reports: https://github.com/paternogbc/sensiPhy/issues
0 errors | 0 warnings | 0 notes
sensitivity (1.12.2)
Maintainer: Bertrand Iooss biooss@yahoo.fr
0 errors | 0 warnings | 0 notes
SensMixed (2.0-10)
Maintainer: Alexandra Kuznetsova alku@dtu.dk
0 errors | 0 warnings | 0 notes
SensusR (2.0.0)
Maintainer: Matthew S. Gerber gerber.matthew@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘SensusR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.LocationDatum
> ### Title: Plot location data.
> ### Aliases: plot.LocationDatum
>
> ### ** Examples
... 188 lines ...
[1] "57% done merging data for WlanDatum (4 of 7)."
[1] "71% done merging data for WlanDatum (5 of 7)."
[1] "85% done merging data for WlanDatum (6 of 7)."
[1] "100% done merging data for WlanDatum (7 of 7)."
[1] "Creating data frame for WlanDatum."
> plot(data$LocationDatum)
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=38.0676352725243,-78.9510441850485&zoom=10&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=38.0676352725243,-78.9510441850485&sensor=false
Error: GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
sentimentr (0.2.3)
Maintainer: Tyler Rinker tyler.rinker@gmail.com
0 errors | 0 warnings | 0 notes
SeqFeatR (0.2.4)
Maintainer: Bettina Budeus bettina.budeus@stud.uni-due.de
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘qvalue’ ‘widgetTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
sgd (1.1)
Maintainer: Dustin Tran dustin@cs.columbia.edu
Bug reports: https://github.com/airoldilab/sgd/issues
0 errors | 0 warnings | 0 notes
sglr (0.7)
Maintainer: Balasubramanian Narasimhan naras@stat.stanford.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
.computePStar: no visible global function definition for ‘uniroot’
plotBoundary: no visible global function definition for
‘scale_y_continuous’
Undefined global functions or variables:
scale_y_continuous uniroot
Consider adding
importFrom("stats", "uniroot")
to your NAMESPACE file.
shazam (0.1.4)
Maintainer: Jason Vander Heiden jason.vanderheiden@yale.edu
Bug reports: https://bitbucket.org/kleinstein/shazam/issues
0 errors | 0 warnings | 0 notes
SHELF (1.2.1)
Maintainer: Jeremy Oakley j.oakley@sheffield.ac.uk
Bug reports: https://github.com/OakleyJ/SHELF/issues
0 errors | 0 warnings | 0 notes
shiny (0.14.2)
Maintainer: Winston Chang winston@rstudio.com
Bug reports: https://github.com/rstudio/shiny/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.2Mb
sub-directories of 1Mb or more:
www 6.1Mb
ShinyItemAnalysis (0.2.0)
Maintainer: Patricia Martinkova martinkova@cs.cas.cz
0 errors | 0 warnings | 0 notes
shinystan (2.2.1)
Maintainer: Jonah Gabry jsg2201@columbia.edu
Bug reports: https://github.com/stan-dev/shinystan/issues/
0 errors | 0 warnings | 0 notes
sidier (3.0.1)
Maintainer: A.J. Muñoz-Pajares ajesusmp@ugr.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
BARRIEL: no visible global function definition for ‘write.table’
FIFTH: no visible global function definition for ‘write.table’
FindHaplo: no visible global function definition for ‘write.table’
HapPerPop: no visible global function definition for ‘read.table’
HapPerPop: no visible global function definition for ‘write.table’
MCIC: no visible global function definition for ‘write.table’
NINA.thr: no visible global function definition for ‘pdf’
NINA.thr: no visible global function definition for ‘dev.off’
NINA.thr: no visible global function definition for ‘write.table’
... 48 lines ...
zero.thr: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
as.dist colors dev.new dev.off layout lines mtext par pdf pie plot
png points read.table segments text write.table
Consider adding
importFrom("grDevices", "colors", "dev.new", "dev.off", "pdf", "png")
importFrom("graphics", "layout", "lines", "mtext", "par", "pie",
"plot", "points", "segments", "text")
importFrom("stats", "as.dist")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
sigmoid (0.2.0)
Maintainer: Bastiaan Quast bquast@gmail.com
0 errors | 0 warnings | 0 notes
Sim.DiffProc (3.4)
Maintainer: Arsalane Chouaib Guidoum acguidoum@usthb.dz
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Ecdat’, ‘PSM’, ‘fptdApprox’, ‘yuima’
simcausal (0.5.1)
Maintainer: Oleg Sofrygin oleg.sofrygin@gmail.com
Bug reports: https://github.com/osofr/simcausal/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
node W1, order:1
node W2, order:2
node W3, order:3
...automatically assigning order attribute to some nodes...
node W1, order:1
node W2, order:2
...automatically assigning order attribute to some nodes...
... 8 lines ...
Attaching package: 'ggplot2'
The following object is masked _by_ '.GlobalEnv':
%+%
Loading required package: lattice
Quitting from lines 2415-2446 (simcausal_vignette.Rnw)
Error: processing vignette 'simcausal_vignette.Rnw' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
SimDesign (1.4)
Maintainer: Phil Chalmers rphilip.chalmers@gmail.com
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘doMPI’
simmer (3.5.0)
Maintainer: Iñaki Ucar i.ucar86@gmail.com
Bug reports: https://github.com/r-simmer/simmer/issues
0 errors | 1 warning | 0 notes
checking compiled code ... WARNING
File ‘simmer/libs/simmer.so’:
Found ‘_abort’, possibly from ‘abort’ (C)
Objects: ‘process.o’, ‘resource.o’, ‘simmer_rcpp.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
simmr (0.3)
Maintainer: Andrew Parnell andrew.parnell@ucd.ie
1 error | 0 warnings | 0 notes
checking whether package ‘simmr’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/simmr.Rcheck/00install.out’ for details.
simPH (1.3.9)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com
Bug reports: https://github.com/christophergandrud/simPH/issues
0 errors | 0 warnings | 0 notes
simstudy (0.1.1)
Maintainer: Keith Goldfeld Keith.Goldfeld@nyumc.org
0 errors | 0 warnings | 0 notes
simTool (1.0.3)
Maintainer: Marsel Scheer scheer@freescience.de
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
evalGrids: no visible global function definition for ‘sessionInfo’
meanAndNormCI: no visible global function definition for ‘sd’
Undefined global functions or variables:
sd sessionInfo
Consider adding
importFrom("stats", "sd")
importFrom("utils", "sessionInfo")
to your NAMESPACE file.
simulator (0.2.0)
Maintainer: Jacob Bien jbien@cornell.edu
Bug reports: http://github.com/jacobbien/simulator/issues
0 errors | 0 warnings | 0 notes
sitmo (1.0.0)
Maintainer: James Balamuta balamut2@illinois.edu
Bug reports: https://github.com/coatless/sitmo/issues
0 errors | 0 warnings | 0 notes
SixSigma (0.9-3)
Maintainer: Emilio L. Cano emilio.lopez@urjc.es
0 errors | 0 warnings | 0 notes
sjPlot (2.1.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de
Bug reports: https://github.com/sjPlot/devel/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘sjPlot-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sjp.scatter
> ### Title: Plot (grouped) scatter plots
> ### Aliases: sjp.scatter
>
> ### ** Examples
... 37 lines ...
> sjp.scatter(efc$c160age, efc$e17age, efc$e42dep, title = "",
+ axis.titles = c("", ""))
>
> # plot text labels
> pl <- c(1:10)
> for (i in 1:10)
+ pl[i] <- paste(sample(c(0:9, letters, LETTERS), 8, replace = TRUE), collapse = "")
> sjp.scatter(runif(10), runif(10), dot.labels = pl)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
sjstats (0.6.0)
Maintainer: Daniel Lüdecke d.luedecke@uke.de
Bug reports: https://github.com/sjPlot/sjstats/issues
0 errors | 0 warnings | 0 notes
slackr (1.4.2)
Maintainer: Bob Rudis bob@rudis.net
Bug reports: https://github.com/hrbrmstr/slackr/issues
0 errors | 0 warnings | 0 notes
slim (0.1.0)
Maintainer: Daniel Farewell farewelld@cf.ac.uk
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 182-190 (slim.Rmd)
Error: processing vignette 'slim.Rmd' failed with diagnostics:
there is no package called 'jmcm'
Execution halted
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘jmcm’ ‘gee’
SmarterPoland (1.7)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.2Mb
sub-directories of 1Mb or more:
data 8.1Mb
SMFI5 (1.0)
Maintainer: Bruno Remillard bruno.remillard@hec.ca
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘ggplot2’ ‘reshape’
Please remove these calls from your code.
Packages in Depends field not imported from:
‘corpcor’ ‘ggplot2’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
LogLikCIR: no visible global function definition for ‘head’
LogLikCIR: no visible global function definition for ‘dchisq’
LogLikFeller: no visible global function definition for ‘head’
LogLikFeller: no visible global function definition for ‘dchisq’
LogLikOU: no visible global function definition for ‘head’
LogLikVasicek: no visible global function definition for ‘head’
bond.cir: no visible global function definition for ‘melt’
bond.cir: no visible global function definition for ‘ggplot’
bond.cir: no visible global function definition for ‘aes’
... 59 lines ...
sim.vasicek: no visible global function definition for ‘geom_line’
sim.vasicek: no visible global function definition for ‘ggtitle’
Undefined global functions or variables:
acf aes cor cov dchisq geom_line ggplot ggtitle head melt optim plot
pseudoinverse qnorm rchisq rnorm rpois sd title
Consider adding
importFrom("graphics", "plot", "title")
importFrom("stats", "acf", "cor", "cov", "dchisq", "optim", "qnorm",
"rchisq", "rnorm", "rpois", "sd")
importFrom("utils", "head")
to your NAMESPACE file.
smoof (1.4)
Maintainer: Jakob Bossek j.bossek@gmail.com
Bug reports: https://github.com/jakobbossek/smoof/issues
0 errors | 0 warnings | 0 notes
snht (1.0.4)
Maintainer: Josh Browning rockclimber112358@gmail.com
0 errors | 0 warnings | 0 notes
snpEnrichment (1.7.0)
Maintainer: Mickael Canouil mickael.canouil@cnrs.fr
Bug reports: https://github.com/mcanouil/snpEnrichment/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘snpStats’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
soc.ca (0.7.3)
Maintainer: Anton Grau Larsen agl.dbp@cbs.dk
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘soc.ca-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add.to.label
> ### Title: Add values to label
> ### Aliases: add.to.label
>
> ### ** Examples
... 75 lines ...
[10] "Film:\n Comedy" "Film:\n CostumeDrama" "Film:\n Documentary"
[13] "Film:\n Horror" "Film:\n Musical" "Film:\n Romance"
[16] "Film:\n SciFi" "Art:\n Impressionism" "Art:\n Landscape"
[19] "Art:\n ModernArt" "Art:\n PerformanceArt" "Art:\n Portrait"
[22] "Art:\n RenaissanceArt" "Art:\n StillLife" "Eat:\n Fish&Chips"
[25] "Eat:\n FrenchRest" "Eat:\n IndianRest" "Eat:\n ItalianRest"
[28] "Eat:\n Pub" "Eat:\n SteakHouse"
> map.ctr(result.label)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
Sofi (0.16.4.8)
Maintainer: Jose D. Loera jose.loera@inegi.org.mx
Bug reports: https://github.com/loerasg/Sofi/issues
0 errors | 0 warnings | 0 notes
solarius (0.3.0.2)
Maintainer: Andrey Ziyatdinov andrey.ziyatdinov@upc.edu
0 errors | 0 warnings | 0 notes
sorvi (0.7.26)
Maintainer: Leo Lahti louhos@googlegroups.com
Bug reports: https://github.com/ropengov/sorvi/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
convert_municipality_names: no visible global function definition for
‘read.csv’
regression_plot: no visible binding for global variable ‘loess’
regression_plot: no visible global function definition for
‘colorRampPalette’
regression_plot: no visible global function definition for
‘loess.control’
regression_plot: no visible global function definition for ‘predict’
regression_plot : <anonymous>: no visible global function definition
for ‘quantile’
regression_plot : <anonymous>: no visible global function definition
for ‘pnorm’
regression_plot: no visible global function definition for
‘flush.console’
regression_plot: no visible global function definition for ‘density’
Undefined global functions or variables:
colorRampPalette density flush.console loess loess.control pnorm
predict quantile read.csv
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("stats", "density", "loess", "loess.control", "pnorm",
"predict", "quantile")
importFrom("utils", "flush.console", "read.csv")
to your NAMESPACE file.
sotkanet (0.9.21)
Maintainer: Leo Lahti louhos@googlegroups.com
Bug reports: https://github.com/ropengov/sotkanet/issues
0 errors | 0 warnings | 0 notes
sourceR (0.2.0)
Maintainer: Poppy Miller p.miller@lancaster.ac.uk
0 errors | 0 warnings | 0 notes
SpaDES (1.3.1)
Maintainer: Alex M Chubaty alexander.chubaty@canada.ca
Bug reports: https://github.com/PredictiveEcology/SpaDES/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘fastshp’
sparkTable (1.2.0)
Maintainer: Alexander Kowarik alexander.kowarik@statistik.gv.at
Bug reports: https://github.com/alexkowa/sparkTable/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘sparkTable-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot-methods
> ### Title: Plot objects of class 'sparkline', 'sparkbar', 'sparkhist' or
> ### 'sparkbox'
> ### Aliases: plot plot-methods plot,sparkbar-method plot,sparkbox-method
> ### plot,sparkline-method plot,sparkhist-method
>
> ### ** Examples
>
> data(pop)
> x <- pop[pop[,2]=="Insgesamt",3]
> a <- newSparkLine(values=x, pointWidth=8)
> plot(a)
Error in theme(legend.position = "none", line = element_blank(), text = element_blank(), :
formal argument "axis.ticks" matched by multiple actual arguments
Calls: plot -> plot -> theme
Execution halted
checking R code for possible problems ... NOTE
plot,sparkbar: possible error in theme(legend.position = "none", line =
element_blank(), text = element_blank(), title = element_blank(),
axis.line = element_blank(), axis.ticks = element_blank(),
legend.background = element_rect(fill = "white", colour = NA),
plot.background = element_blank(), strip.background =
element_rect(fill = "white", colour = "white"), panel.margin =
unit(0, "null"), plot.margin = rep(unit(0, "null"), 4), panel.grid =
element_blank(), axis.ticks = element_blank(), axis.ticks.length =
unit(0, "null"), axis.text.x = element_blank(), : formal argument
... 33 lines ...
axis.line = element_blank(), axis.ticks = element_blank(),
legend.background = element_rect(fill = "white", colour = NA),
plot.background = element_blank(), strip.background =
element_rect(fill = "white", colour = "white"), panel.margin =
unit(0, "null"), plot.margin = rep(unit(0, "null"), 4), panel.grid =
element_blank(), axis.ticks = element_blank(), axis.ticks.length =
unit(0, "null"), axis.text.x = element_blank(), : formal argument
"axis.ticks" matched by multiple actual arguments
plot,sparkline: possible error in axis.text.y = element_blank(),
panel.background = element_rect(fill = allColors(x)[4])): formal
argument "axis.ticks" matched by multiple actual arguments
sparsediscrim (0.2.3)
Maintainer: John A. Ramey johnramey@gmail.com
0 errors | 0 warnings | 0 notes
SparseFactorAnalysis (1.0)
Maintainer: Marc Ratkovic ratkovic@princeton.edu
0 errors | 0 warnings | 0 notes
sparsereg (1.2)
Maintainer: Marc Ratkovic ratkovic@princeton.edu
0 errors | 0 warnings | 0 notes
sparsevar (0.0.9)
Maintainer: Simone Vazzoler svazzole@gmail.com
Bug reports: http://github.com/svazzole/sparsevar
0 errors | 0 warnings | 0 notes
spatialClust (1.1.1)
Maintainer: Imam Habib Pamungkas imamhabibpamungkas@gmail.com
0 errors | 0 warnings | 0 notes
spbabel (0.4.5)
Maintainer: Michael D. Sumner mdsumner@gmail.com
Bug reports: https://github.com/mdsumner/spbabel/issues
0 errors | 0 warnings | 0 notes
spcosa (0.3-6)
Maintainer: Dennis Walvoort dennis.Walvoort@wur.nl
1 error | 0 warnings | 0 notes
checking whether package ‘spcosa’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/spcosa.Rcheck/00install.out’ for details.
specmine (1.0)
Maintainer: Christopher Costa chrisbcl@hotmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘xcms’ ‘MAIT’ ‘genefilter’ ‘impute’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
spef (1.0-1)
Maintainer: Sy Han (Steven) Chiou schiou@hsph.harvard.edu
0 errors | 0 warnings | 0 notes
spikeSlabGAM (1.1-11)
Maintainer: Fabian Scheipl
fabian.scheipl@stat.uni-muenchen.de
0 errors | 0 warnings | 0 notes
SPOT (1.1.0)
Maintainer: Martin Zaefferer martin.zaefferer@gmx.de
0 errors | 0 warnings | 0 notes
sprm (1.2.2)
Maintainer: Irene Hoffmann irene.hoffmann@tuwien.ac.at
0 errors | 0 warnings | 0 notes
squid (0.1.1)
Maintainer: Hassen Allegue hassen.allegue@gmail.com
Bug reports: https://github.com/hallegue/squid/issues
0 errors | 0 warnings | 0 notes
srvyr (0.2.0)
Maintainer: Greg Freedman Ellis greg.freedman@gmail.com
Bug reports: https://github.com/gergness/srvyr/issues
0 errors | 0 warnings | 0 notes
ss3sim (0.9.2)
Maintainer: Sean Anderson sean@seananderson.ca
0 errors | 0 warnings | 0 notes
starma (1.3)
Maintainer: Felix Cheysson felix@cheysson.fr
0 errors | 0 warnings | 0 notes
starmie (0.1.2)
Maintainer: Stuart Lee lee.s@wehi.edu.au
Bug reports: https://github.com/sa-lee/starmie/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘iterpc’ ‘label.switching’ ‘MCL’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
statar (0.6.2)
Maintainer: Matthieu Gomez mattg@princeton.edu
Bug reports: https://github.com/matthieugomez/statar/issues
0 errors | 0 warnings | 0 notes
statcheck (1.2.2)
Maintainer: Michele B. Nuijten m.b.nuijten@uvt.nl
0 errors | 0 warnings | 0 notes
statebins (1.2.2)
Maintainer: Bob Rudis bob@rudis.net
Bug reports: https://github.com/hrbrmstr/statebins/issues
0 errors | 0 warnings | 0 notes
StatRank (0.0.6)
Maintainer: Hossein Azari Soufiani azari.hossein@gmail.com
0 errors | 0 warnings | 0 notes
strataG (1.0.5)
Maintainer: Eric Archer eric.archer@noaa.gov
Bug reports: https://github.com/EricArcher/strataG/issues
0 errors | 0 warnings | 0 notes
StroupGLMM (0.1.0)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘StroupGLMM’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/StroupGLMM.Rcheck/00install.out’ for details.
structSSI (1.1.1)
Maintainer: Kris Sankaran kriss1@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
Package suggested but not available for checking: ‘phyloseq’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
strvalidator (1.8.0)
Maintainer: Oskar Hansson oskar.hansson@fhi.no
Bug reports: https://github.com/OskarHansson/strvalidator/issues
1 error | 0 warnings | 0 notes
checking whether package ‘strvalidator’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/strvalidator.Rcheck/00install.out’ for details.
subspaceMOA (0.5.1)
Maintainer: Marwan Hassani rsubspace@cs.rwth-aachen.de
1 error | 0 warnings | 0 notes
checking whether package ‘subspaceMOA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/subspaceMOA.Rcheck/00install.out’ for details.
SuperLearner (2.0-19)
Maintainer: Eric Polley polley.eric@mayo.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘genefilter’ ‘sva’
surveillance (1.12.1)
Maintainer: Sebastian Meyer Sebastian.Meyer@ifspm.uzh.ch
Bug reports: https://r-forge.r-project.org/tracker/?group_id=45
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
... 8 lines ...
Loading required package: parallel
********** GAMLSS Version 5.0-0 **********
For more on GAMLSS look at http://www.gamlss.org/
Type gamlssNews() to see new features/changes/bug fixes.
Error: processing vignette 'monitoringCounts.Rnw' failed with diagnostics:
chunk 17 (label = fPlot1)
Error in theme(axis.line = element_blank(), panel.grid.major = element_blank(), :
formal argument "axis.line" matched by multiple actual arguments
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘INLA’
checking installed package size ... NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
doc 2.2Mb
survminer (0.2.2)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com
Bug reports: https://github.com/kassambara/survminer/issues
1 error | 2 warnings | 1 note
checking examples ... ERROR
Running examples in ‘survminer-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ggsurvplot
> ### Title: Drawing Survival Curves Using ggplot2
> ### Aliases: ggsurvplot print.ggsurvplot
>
> ### ** Examples
... 51 lines ...
>
> # Use brewer color palette "Dark2"
> # Add risk table
> ggsurvplot(fit, linetype = "strata",
+ conf.int = TRUE, pval = TRUE,
+ palette = "Dark2", risk.table = TRUE)
Warning in is.na(x) :
is.na() applied to non-(list or vector) of type 'NULL'
Error in -x : invalid argument to unary operator
Calls: ggsurvplot ... summary.survfit -> findrow -> find2 -> findInterval
Execution halted
checking Rd cross-references ... WARNING
Missing link or links in documentation object 'ggcoxdiagnostics.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggcoxfunctional.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggcoxzph.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggsurvplot.Rd':
‘ggtheme’
See section 'Cross-references' in the 'Writing R Extensions' manual.
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: ggplot2
Quitting from lines 55-64 (Informative_Survival_Plots.Rmd)
Error: processing vignette 'Informative_Survival_Plots.Rmd' failed with diagnostics:
there is no package called 'RTCGA.clinical'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RTCGA.clinical’
survMisc (0.5.3)
Maintainer: Chris Dardis christopherdardis@gmail.com
Bug reports: https://github.com/dardisco/survMisc/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘survMisc-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: autoplotTableAndPlot
> ### Title: Arrange a survival plot with corresponding table and legend.
> ### Aliases: autoplot.tableAndPlot autoplotTableAndPlot
> ### Keywords: graphics
>
> ### ** Examples
>
> data("kidney", package="KMsurv")
> autoplot(survfit(Surv(time, delta) ~ type, data=kidney), type="fill")
Warning: Ignoring unknown aesthetics: x, y
Warning: Ignoring unknown aesthetics: x, y
Error in if (is.nan(times1[1])) times1 <- times :
argument is of length zero
Calls: autoplot -> autoplot.survfit
Execution halted
SurvRank (0.1)
Maintainer: Michael Laimighofer michael.laimighofer@helmholtz-muenchen.de
0 errors | 0 warnings | 0 notes
sValues (0.1.4)
Maintainer: Carlos Cinelli carloscinelli@hotmail.com
Bug reports: https://github.com/carloscinelli/sValues
0 errors | 0 warnings | 0 notes
svdvis (0.1)
Maintainer: Neo Christopher Chung nchchung@gmail.com
0 errors | 0 warnings | 0 notes
swfscMisc (1.2)
Maintainer: Eric Archer eric.archer@noaa.gov
Bug reports: https://github.com/EricArcher/swfscMisc/issues
0 errors | 0 warnings | 0 notes
SWMPr (2.1.7)
Maintainer: Marcus W. Beck mbafs2012@gmail.com
Bug reports: https://github.com/fawda123/SWMPr/issues
0 errors | 0 warnings | 0 notes
synthpop (1.3-0)
Maintainer: Beata Nowok beata.nowok@gmail.com
0 errors | 0 warnings | 0 notes
tableone (0.7.3)
Maintainer: Kazuki Yoshida kazukiyoshida@mail.harvard.edu
0 errors | 0 warnings | 0 notes
tabplot (1.3)
Maintainer: Martijn Tennekes mtennekes@gmail.com
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘tabplot-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tableplot
> ### Title: Create a tableplot
> ### Aliases: tableplot
> ### Keywords: visualization
>
... 41 lines ...
font width unknown for character 0x9
>
> # create a tableplot cut category, and fix scale limits of carat, table, and price
> tabs <- tableplot(p, subset=cut,
+ limitsX=list(carat=c(0,4), table=c(55, 65), price=c(0, 20000)), plot=FALSE)
Error in if (dfile == getOption("fftempdir")) finalizer <- "delete" else finalizer <- "close" :
argument is of length zero
Calls: tableplot ... clone.ffdf -> lapply -> FUN -> clone.ff -> assign -> ff
Error in setwd(cwd) : character argument expected
Calls: tableplot ... clone.ffdf -> lapply -> FUN -> clone.ff -> assign -> ff -> setwd
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 27-39 (tabplot-timings.Rmd)
Error: processing vignette 'tabplot-timings.Rmd' failed with diagnostics:
(list) object cannot be coerced to type 'double'
Execution halted
tadaatoolbox (0.10.0)
Maintainer: Lukas Burk lukas@quantenbrot.de
Bug reports: https://github.com/tadaadata/tadaatoolbox/issues
0 errors | 0 warnings | 0 notes
taRifx (1.0.6)
Maintainer: Ari B. Friedman abfriedman@gmail.com
0 errors | 0 warnings | 4 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘gdata’ ‘ggplot2’ ‘grid’ ‘lattice’ ‘xtable’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
as.matrix.by stack.list
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
as.data.frame.by: no visible global function definition for ‘na.omit’
autoplot.microbenchmark : uq: no visible global function definition for
‘quantile’
autoplot.microbenchmark : lq: no visible global function definition for
‘quantile’
autoplot.microbenchmark: no visible global function definition for
‘ggplot’
autoplot.microbenchmark: no visible global function definition for
‘aes’
... 90 lines ...
grid.points grid.polyline grid.rect grid.segments grid.text
interleave label<- latticeParseFormula median na.omit opts
panel.densityplot panel.lines panel.xyplot par pf plot.new
popViewport pushViewport quantile sd seekViewport stat_summary terms
text theme_text time unit upViewport viewport write.csv xtable
Consider adding
importFrom("graphics", "barplot", "par", "plot.new", "text")
importFrom("stats", "ecdf", "median", "na.omit", "pf", "quantile",
"sd", "terms", "time")
importFrom("utils", "write.csv")
to your NAMESPACE file.
TcGSA (0.10.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu
Bug reports: https://github.com/borishejblum/TcGSA/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
tcgsaseq (1.0.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu
Bug reports: https://github.com/denisagniel/tcgsaseq/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘tcgsaseq-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: voom_weights
> ### Title: Precision weights accounting for heteroscedasticity in RNA-seq
> ### count data
> ### Aliases: voom_weights
>
... 7 lines ...
> n <- 12
> p <- 2
> y <- t(sapply(1:G, FUN=function(x){rnbinom(n=n, size=0.07, mu=200)}))
>
> x <- sapply(1:p, FUN=function(x){rnorm(n=n, mean=n, sd=1)})
>
> my_w <- voom_weights(y, x, doPlot=TRUE)
> w_voom <- limma::voom(counts=y, design=x, plot=TRUE) #slightly faster than us. Same results
Error in loadNamespace(name) : there is no package called ‘limma’
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘limma’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘limma’
tcR (2.2.1.11)
Maintainer: Vadim Nazarov vdm.nazarov@gmail.com
Bug reports: https://github.com/imminfo/tcr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
data 1.2Mb
doc 3.9Mb
tdr (0.11)
Maintainer: Oscar Perpinan Lamigueiro oscar.perpinan@gmail.com
Bug reports: https://github.com/oscarperpinan/tdr/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
makeCircles: no visible global function definition for ‘quantile’
targetDiagram: no visible global function definition for ‘as.formula’
targetDiagram: no visible global function definition for ‘modifyList’
targetDiagram: no visible global function definition for ‘extendrange’
tdStats : sdo: no visible global function definition for ‘sd’
tdStats : sdm: no visible global function definition for ‘sd’
tdStats : r2: no visible global function definition for ‘cor’
Undefined global functions or variables:
as.formula cor extendrange modifyList quantile sd
Consider adding
importFrom("grDevices", "extendrange")
importFrom("stats", "as.formula", "cor", "quantile", "sd")
importFrom("utils", "modifyList")
to your NAMESPACE file.
TELP (1.0)
Maintainer: Gabriel Henrique Oliveira Assuncao gabrielhenryoliver@hotmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘TELP-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: telp
> ### Title: The Base Function of This Package The Free Evocation of Words
> ### Technique
> ### Aliases: telp
> ### Keywords: function
>
> ### ** Examples
>
> telp()
Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
[tcl] invalid command name "toplevel".
Calls: telp ... tktoplevel -> tkwidget -> tcl -> .Tcl.objv -> structure
Execution halted
texmexseq (0.3)
Maintainer: Scott Olesen swo@mit.edu
0 errors | 0 warnings | 0 notes
Thermimage (2.2.3)
Maintainer: Glenn J. Tattersall gtatters@brocku.ca
Bug reports: http://github.com/gtatters/Thermimage/issues
0 errors | 0 warnings | 0 notes
thief (0.2)
Maintainer: Rob Hyndman Rob.Hyndman@monash.edu
Bug reports: https://github.com/robjhyndman/thief/issues
0 errors | 0 warnings | 0 notes
tidyjson (0.2.1)
Maintainer: Jeremy Stanley jeremy.stanley@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
read_json: no visible global function definition for ‘tail’
Undefined global functions or variables:
tail
Consider adding
importFrom("utils", "tail")
to your NAMESPACE file.
tidytext (0.1.2)
Maintainer: Julia Silge julia.silge@gmail.com
Bug reports: http://github.com/juliasilge/tidytext/issues
0 errors | 0 warnings | 0 notes
tidyverse (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/tidyverse/issues
0 errors | 0 warnings | 0 notes
tigerstats (0.2.7)
Maintainer: Homer White hwhite0@georgetowncollege.edu
0 errors | 0 warnings | 0 notes
tigger (0.2.8)
Maintainer: Daniel Gadala-Maria daniel.gadala-maria@yale.edu
Bug reports: https://bitbucket.org/kleinstein/tigger/issues
0 errors | 0 warnings | 0 notes
tigris (0.3.3)
Maintainer: Kyle Walker kyle.walker@tcu.edu
0 errors | 0 warnings | 0 notes
tikzDevice (0.10-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org
Bug reports: https://github.com/yihui/tikzDevice/issues
0 errors | 0 warnings | 0 notes
timeit (0.2.1)
Maintainer: Kevin Ushey kevinushey@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘ggplot2’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘microbenchmark’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
determine_replications: no visible global function definition for
‘microbenchmark’
do_timeit: no visible global function definition for ‘Rprof’
do_timeit: no visible global function definition for ‘summaryRprof’
mean.timeit: no visible global function definition for ‘aggregate’
plot.timeit: no visible global function definition for ‘ggplot’
plot.timeit: no visible global function definition for ‘aes’
plot.timeit: no visible global function definition for ‘geom_boxplot’
plot.timeit: no visible global function definition for ‘geom_point’
plot.timeit: no visible global function definition for ‘xlab’
plot.timeit: no visible global function definition for ‘ylab’
plot.timeit: no visible global function definition for ‘ggtitle’
plot.timeit: no visible global function definition for ‘coord_flip’
timeit: no visible binding for global variable ‘median’
Undefined global functions or variables:
Rprof aes aggregate coord_flip geom_boxplot geom_point ggplot ggtitle
median microbenchmark summaryRprof xlab ylab
Consider adding
importFrom("stats", "aggregate", "median")
importFrom("utils", "Rprof", "summaryRprof")
to your NAMESPACE file.
timeline (0.9)
Maintainer: Jason Bryer jason@bryer.org
Bug reports: https://github.com/jbryer/timeline/issues
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘shiny’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
timeline: no visible global function definition for ‘ggplot’
timeline: no visible global function definition for ‘geom_segment’
timeline: no visible global function definition for ‘aes_string’
timeline: no visible global function definition for ‘geom_rect’
timeline: no visible global function definition for ‘geom_text’
timeline: no visible global function definition for ‘theme’
timeline: no visible global function definition for ‘element_blank’
timeline: no visible global function definition for ‘xlab’
timeline: no visible global function definition for ‘ylab’
timeline: no visible global function definition for ‘xlim’
timeline: no visible global function definition for
‘scale_y_continuous’
timeline: no visible global function definition for ‘geom_point’
timeline: no visible global function definition for ‘scale_color_grey’
timeline: no visible global function definition for ‘geom_hline’
Undefined global functions or variables:
aes_string element_blank geom_hline geom_point geom_rect geom_segment
geom_text ggplot scale_color_grey scale_y_continuous theme xlab xlim
ylab
timelineS (0.1.1)
Maintainer: Dahee Lee dhlee99@gmail.com
Bug reports: https://github.com/daheelee/timelineS/issues
0 errors | 0 warnings | 0 notes
TimeProjection (0.2.0)
Maintainer: Jeffrey Wong jeff.ct.wong@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘plyr’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘Matrix’ ‘lubridate’ ‘timeDate’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
is.Bizday: no visible global function definition for ‘isWeekday’
plotCalendarHeatmap: no visible global function definition for ‘ddply’
plotCalendarHeatmap: no visible global function definition for ‘.’
plotCalendarHeatmap: no visible binding for global variable ‘year’
plotCalendarHeatmap: no visible binding for global variable ‘month’
plotCalendarHeatmap: no visible binding for global variable ‘week’
plotCalendarHeatmap: no visible global function definition for ‘ggplot’
plotCalendarHeatmap: no visible global function definition for ‘aes’
plotCalendarHeatmap: no visible binding for global variable ‘monthweek’
plotCalendarHeatmap: no visible binding for global variable ‘weekday’
plotCalendarHeatmap: no visible global function definition for
‘geom_tile’
plotCalendarHeatmap: no visible global function definition for
‘facet_grid’
plotCalendarHeatmap: no visible global function definition for
‘scale_fill_gradientn’
projectDate: no visible global function definition for ‘holidayNYSE’
projectDate: no visible global function definition for
‘sparse.model.matrix’
Undefined global functions or variables:
. aes ddply facet_grid geom_tile ggplot holidayNYSE isWeekday month
monthweek scale_fill_gradientn sparse.model.matrix week weekday year
TippingPoint (1.1.0)
Maintainer: Xikun Han hanxikun2014@163.com
0 errors | 0 warnings | 0 notes
tmap (1.6-1)
Maintainer: Martijn Tennekes mtennekes@gmail.com
Bug reports: https://github.com/mtennekes/tmap/issues
0 errors | 0 warnings | 0 notes
Tmisc (0.1.10)
Maintainer: Stephen Turner vustephen@gmail.com
0 errors | 0 warnings | 0 notes
toaster (0.5.4)
Maintainer: Gregory Kanevsky gregory.kanevsky@teradata.com
Bug reports: https://github.com/teradata-aster-field/toaster/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RODBC’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
tourr (0.5.4)
Maintainer: Hadley Wickham h.wickham@gmail.com
Bug reports: https://github.com/ggobi/tourr/
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘TeachingDemos’ ‘ash’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
animate: no visible global function definition for ‘dev.hold’
animate: no visible global function definition for ‘dev.flush’
animate : <anonymous>: no visible global function definition for
‘dev.flush’
animate_stereo: no visible global function definition for ‘rgb’
bases_little: no visible global function definition for ‘combn’
basis_random: no visible global function definition for ‘rnorm’
blank_plot: no visible global function definition for ‘par’
blank_plot: no visible global function definition for ‘plot’
... 88 lines ...
stars step str text
Consider adding
importFrom("grDevices", "dev.cur", "dev.flush", "dev.hold", "dev.off",
"hcl", "rgb")
importFrom("graphics", "abline", "axis", "box", "hist", "image",
"lines", "pairs", "par", "plot", "points", "polygon",
"rect", "segments", "stars", "text")
importFrom("stats", "aov", "as.dist", "density", "manova", "optimize",
"prcomp", "predict", "rnorm", "runif", "step")
importFrom("utils", "capture.output", "combn", "data", "str")
to your NAMESPACE file.
tourrGui (0.4)
Maintainer: Dianne Cook dicook@iastate.edu
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rggobi’
checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
MIT
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘Cairo’ ‘RGtk2’ ‘colorspace’ ‘gWidgets’ ‘tourr’
Please remove these calls from your code.
'library' or 'require' calls in package code:
‘TeachingDemos’ ‘ash’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘Cairo’ ‘RGtk2’ ‘colorspace’ ‘gWidgets’ ‘tourr’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.create_1d_tour: no visible global function definition for ‘gmessage’
.create_1d_tour: no visible global function definition for
‘display_dist’
.create_1d_tour: no visible global function definition for ‘grand_tour’
.create_1d_tour: no visible global function definition for
‘little_tour’
.create_1d_tour: no visible global function definition for
‘guided_tour’
.create_1d_tour: no visible binding for global variable ‘holes’
... 703 lines ...
display_scatmat display_stars display_stereo display_xy dispose
find_platform flea gIdleAdd gbutton gcheckbox gcheckboxgroup
gdroplist ggroup glayout gmessage gnotebook gradio grand_tour gslider
gtable gtkIdleRemove guided_tour gwindow holes lda_pp little_tour
local_tour ozone par pda_pp rainbow_hcl rescale rgb sphere svalue
svalue<- tooltip<- visible<-
Consider adding
importFrom("grDevices", "dev.control", "dev.cur", "dev.list",
"dev.new", "rgb")
importFrom("graphics", "par")
to your NAMESPACE file.
toxboot (0.1.1)
Maintainer: Eric D. Watt eric@ericdwatt.com
Bug reports: https://github.com/ericwatt/toxboot/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rmongodb’
trackeR (0.0.4)
Maintainer: Hannah Frick h.frick@ucl.ac.uk
Bug reports: https://github.com/hfrick/trackeR/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: zoo
Attaching package: 'zoo'
The following objects are masked from 'package:base':
as.Date, as.Date.numeric
Loading required package: ggplot2
Attaching package: 'trackeR'
The following object is masked from 'package:base':
append
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=57.157231,-2.104296&zoom=13&size=640x640&scale=2&maptype=terrain&sensor=false
Quitting from lines 90-91 (TourDetrackeR.Rmd)
Error: processing vignette 'TourDetrackeR.Rmd' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
trapezoid (2.0-0)
Maintainer: Jeremy Thoms Hetzel jthetzel@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
rtrapezoid: no visible global function definition for ‘runif’
Undefined global functions or variables:
runif
Consider adding
importFrom("stats", "runif")
to your NAMESPACE file.
TreatmentSelection (1.2.0)
Maintainer: Marshall Brown mdbrown@fhcrc.org
0 errors | 0 warnings | 0 notes
treeclim (2.0.0)
Maintainer: Christian Zang christian.zang@wzw.tum.de
0 errors | 0 warnings | 0 notes
treecm (1.2.2)
Maintainer: Marco Bascietto marco.bascietto@entecra.it
0 errors | 0 warnings | 0 notes
treemap (2.4-1)
Maintainer: Martijn Tennekes mtennekes@gmail.com
0 errors | 0 warnings | 0 notes
treescape (1.10.17)
Maintainer: Michelle Kendall m.kendall@imperial.ac.uk
0 errors | 0 warnings | 0 notes
trelliscope (0.9.7)
Maintainer: Ryan Hafen rhafen@gmail.com
Bug reports: https://github.com/delta-rho/trelliscope/issues
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
TriMatch (0.9.7)
Maintainer: Jason Bryer jason@bryer.org
Bug reports: https://github.com/jbryer/TriMatch/issues
0 errors | 0 warnings | 0 notes
TripleR (1.5.3)
Maintainer: Felix Schönbrodt felix.schoenbrodt@psy.lmu.de
0 errors | 0 warnings | 0 notes
TSMining (1.0)
Maintainer: Cheng Fan raja8885@hotmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Func.SAX: no visible global function definition for ‘sd’
Func.SAX: no visible global function definition for ‘qnorm’
Func.matrix: no visible global function definition for ‘qnorm’
Func.motif: no visible global function definition for ‘sd’
Func.motif: no visible global function definition for ‘na.omit’
Func.motif: no visible global function definition for ‘combn’
Func.motif.multivariate: no visible global function definition for
‘txtProgressBar’
Func.motif.multivariate: no visible global function definition for
‘setTxtProgressBar’
Undefined global functions or variables:
combn na.omit qnorm sd setTxtProgressBar txtProgressBar
Consider adding
importFrom("stats", "na.omit", "qnorm", "sd")
importFrom("utils", "combn", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
tspmeta (1.2)
Maintainer: Bernd Bischl bernd_bischl@gmx.net
Bug reports: https://github.com/berndbischl/tspmeta/issues
0 errors | 0 warnings | 0 notes
TSS.RESTREND (0.1.02)
Maintainer: Arden Burrell arden.burrell@unsw.edu.au
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘gimms’
tufterhandout (1.2.1)
Maintainer: Michael C Sachs sachsmc@gmail.com
Bug reports: http://github.com/sachsmc/tufterhandout/issues
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
tvm (0.3.0)
Maintainer: Juan Manuel Truppia jmtruppia@gmail.com
0 errors | 0 warnings | 0 notes
tweet2r (1.0)
Maintainer: Pau Aragó parago@uji.es
0 errors | 0 warnings | 0 notes
ubeR (0.1.3)
Maintainer: Andrew Collier andrew@exegetic.biz
Bug reports: https://github.com/DataWookie/ubeR/issues
0 errors | 0 warnings | 0 notes
UBL (0.0.5)
Maintainer: Paula Branco paobranco@gmail.com
Bug reports: https://github.com/paobranco/UBL/issues
1 error | 0 warnings | 0 notes
checking whether package ‘UBL’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/UBL.Rcheck/00install.out’ for details.
ukgasapi (0.13)
Maintainer: Timothy Wong timothy.wong@hotmail.co.uk
Bug reports: https://github.com/timothy-wong/ukgasapi/issues
0 errors | 0 warnings | 1 note
checking Rd line widths ... NOTE
Rd file 'dataItemExplorer.Rd':
\usage lines wider than 90 characters:
apiurl = "http://marketinformation.natgrid.co.uk/MIPIws-public/public/publicwebservice.asmx")
These lines will be truncated in the PDF manual.
unvotes (0.1.0)
Maintainer: David Robinson admiral.david@gmail.com
Bug reports: http://github.com/dgrtwo/unvotes/issues
0 errors | 0 warnings | 0 notes
UpSetR (1.3.0)
Maintainer: Jake Conway jake_conway@student.uml.edu
Bug reports: http://github.com/hms-dbmi/UpSetR/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Quitting from lines 77-78 (set.metadata.plots.Rmd)
Error: processing vignette 'set.metadata.plots.Rmd' failed with diagnostics:
formal argument "axis.title.x" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
metadataHeat: possible error in theme(panel.background =
element_rect("white"), plot.title = element_text(margin = margin(b =
titleAdjustment), hjust = 0, size = 9.25, angle = 90), plot.margin =
unit(c(0, 0, 0, 0), "lines"), axis.title.x = element_text(size =
8.3), legend.position = "none", axis.line = element_blank(),
axis.line = element_line(colour = "gray0"), axis.line.y =
element_blank(), axis.line.x = element_line(colour = "gray0", size =
0.3), axis.text.y = element_blank(), axis.ticks.y = element_blank(),
axis.title.y = element_blank(), : formal argument "axis.title.x"
... 7 lines ...
titleAdjustment), hjust = 0, size = 8.3, angle = 90), plot.margin =
unit(c(0, 0, 0, 0), "lines"), axis.title.x = element_text(size = 7),
legend.position = "none", axis.line = element_blank(), axis.line =
element_line(colour = "gray0"), axis.line.y = element_blank(),
axis.line.x = element_line(colour = "gray0", size = 0.3), axis.text.y
= element_blank(), axis.ticks.y = element_blank(), axis.title.y =
element_blank(), : formal argument "axis.title.x" matched by multiple
actual arguments
metadataText: possible error in axis.text.x = element_blank(),
axis.ticks.x = element_blank(), axis.title.x = element_blank()):
formal argument "axis.title.x" matched by multiple actual arguments
useful (1.2.1)
Maintainer: Jared P. Lander packages@jaredlander.com
0 errors | 0 warnings | 0 notes
userfriendlyscience (0.4-1)
Maintainer: Gjalt-Jorn Peters gjalt-jorn@userfriendlyscience.com
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘userfriendlyscience-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: asymmetricalScatterMatrix
> ### Title: asymmetricalScatterMatrix
> ### Aliases: asymmetricalScatterMatrix
> ### Keywords: misc
>
> ### ** Examples
>
> asymmetricalScatterMatrix(infert, cols=c("parity", "age"),
+ rows=c("induced", "case", "spontaneous"),
+ showCorrelations="top-right");
Error in theme(axis.text = element_text(colour = "#000000", size = rel(0.8)), :
formal argument "strip.background" matched by multiple actual arguments
Calls: asymmetricalScatterMatrix ... dlvTheme -> %+replace% -> is.theme -> inherits -> theme
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
checking R code for possible problems ... NOTE
didacticPlotTheme: possible error in theme(axis.text =
element_text(colour = "#000000", size = rel(0.8)), axis.ticks =
element_line(colour = "black"), legend.text = element_text(size =
rel(0.6)), legend.key = element_rect(colour = "grey80"),
legend.position = "top", legend.direction = "horizontal",
legend.key.size = unit(6, "mm"), panel.background = element_rect(fill
= "white", colour = NA), panel.border = element_rect(fill = NA,
colour = "grey50"), panel.grid.major = element_line(colour =
"grey90", size = 0.2), panel.grid.minor = element_line(colour =
... 13 lines ...
legend.key.size = unit(6, "mm"), panel.background = element_rect(fill
= "white", colour = NA), panel.border = element_rect(fill = NA,
colour = "grey50"), panel.grid.major = element_line(colour =
"grey90", size = 0.2), : formal argument "strip.background" matched
by multiple actual arguments
dlvTheme: possible error in panel.grid.minor = element_line(colour =
"grey98", size = 0.5), strip.background = element_rect(fill =
"grey80", colour = "grey50"), strip.background = element_rect(fill =
"grey80", colour = "grey50"), panel.margin = unit(c(0.5), "cm"),
...): formal argument "strip.background" matched by multiple actual
arguments
UsingR (2.0-5)
Maintainer: John Verzani verzani@math.csi.cuny.edu
1 error | 0 warnings | 0 notes
checking whether package ‘UsingR’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/UsingR.Rcheck/00install.out’ for details.
varian (0.2.2)
Maintainer: Joshua F. Wiley josh@elkhartgroup.com
Bug reports: https://github.com/ElkhartGroup/varian/issues
0 errors | 0 warnings | 0 notes
vcdExtra (0.7-0)
Maintainer: Michael Friendly friendly@yorku.ca
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘alr3’
vcfR (1.2.0)
Maintainer: Brian J. Knaus briank.lists@gmail.com
0 errors | 0 warnings | 0 notes
VDAP (2.0.0)
Maintainer: Cody Moore Jumper9400@gmail.com
0 errors | 0 warnings | 0 notes
vdg (1.2.0)
Maintainer: Pieter Schoonees schoonees@gmail.com
0 errors | 0 warnings | 0 notes
vdmR (0.2.2)
Maintainer: Tomokazu Fujino fujino@fwu.ac.jp
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘vdmR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: vhist
> ### Title: Generate histogram with interactive functions
> ### Aliases: vhist
>
> ### ** Examples
>
> data(vsfuk2012)
> vhist(FertilityRate, vsfuk2012, "hist1", "vsfuk2012", fill=Type)
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Error in grid.Call.graphics(L_downviewport, name$name, strict) :
Viewport 'panel.3-4-3-4' was not found
Calls: vhist ... downViewport -> downViewport.vpPath -> grid.Call.graphics
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
Viewport 'panel.3-4-3-4' was not found
1: vhist(Sepal.Length, iris, "hist01", "iris", fill = Species) at /Users/hadley/Documents/ggplot/ggplot2/revdep/checks/vdmR.Rcheck/vdmR/tests/test-vdmR.R:7
2: grid::downViewport("panel.3-4-3-4")
3: downViewport.default("panel.3-4-3-4")
4: downViewport(vpPath(name), strict, recording = recording)
5: downViewport.vpPath(vpPath(name), strict, recording = recording)
6: grid.Call.graphics(L_downviewport, name$name, strict)
DONE ===========================================================================
Error: Test failures
In addition: Warning message:
Placing tests in `inst/tests/` is deprecated. Please use `tests/testthat/` instead
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Quitting from lines 40-42 (vdmR-vignette.Rnw)
Error: processing vignette 'vdmR-vignette.Rnw' failed with diagnostics:
Viewport 'panel.3-4-3-4' was not found
Execution halted
VetResearchLMM (0.1.0)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
0 errors | 0 warnings | 0 notes
vipor (0.4.4)
Maintainer: Scott Sherrill-Mix shescott@upenn.edu
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: sm
Package 'sm', version 2.2-5.4: type help(sm) for summary information
Loading required package: ggplot2
Error: processing vignette 'usageExamples.Rnw' failed with diagnostics:
PositionQuasirandom was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
viridis (0.3.4)
Maintainer: Simon Garnier garnier@njit.edu
Bug reports: https://github.com/sjmgarnier/viridis/issues
0 errors | 0 warnings | 0 notes
viridisLite (0.1.3)
Maintainer: Simon Garnier garnier@njit.edu
Bug reports: https://github.com/sjmgarnier/viridisLite/issues
0 errors | 0 warnings | 0 notes
visreg (2.3-0)
Maintainer: Patrick Breheny patrick-breheny@uiowa.edu
0 errors | 0 warnings | 0 notes
vmsbase (2.1.3)
Maintainer: Lorenzo D'Andrea support@vmsbase.org
1 error | 0 warnings | 0 notes
checking whether package ‘vmsbase’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/vmsbase.Rcheck/00install.out’ for details.
voxel (1.2.1)
Maintainer: Angel Garcia de la Garza agarciadlg@gmail.com
0 errors | 0 warnings | 0 notes
vrcp (0.1.1)
Maintainer: Yulei Wang yxw390@case.edu
0 errors | 0 warnings | 0 notes
VRPM (1.1)
Maintainer: Vanya Van Belle vanya.vanbelle@esat.kuleuven.be
0 errors | 0 warnings | 0 notes
VSE (0.99)
Maintainer: Hansen He hansenhe@uhnresearch.ca
0 errors | 0 warnings | 0 notes
vtreat (0.5.28)
Maintainer: John Mount jmount@win-vector.com
Bug reports: https://github.com/WinVector/vtreat/issues
0 errors | 0 warnings | 0 notes
VWPre (0.9.0)
Maintainer: Vincent Porretta vincentporretta@gmail.com
0 errors | 0 warnings | 0 notes
waffle (0.6.0)
Maintainer: Bob Rudis bob@rud.is
Bug reports: https://github.com/hrbrmstr/waffle/issues
0 errors | 0 warnings | 0 notes
wakefield (0.3.0)
Maintainer: Tyler Rinker tyler.rinker@gmail.com
Bug reports: https://github.com/trinker/wakefield/issues
0 errors | 0 warnings | 0 notes
walkr (0.3.3)
Maintainer: Andy Yao andy.yao17@gmail.com
Bug reports: https://github.com/andyyao95/walkr/issues
0 errors | 0 warnings | 0 notes
warbleR (1.1.2)
Maintainer: Marcelo Araya-Salas araya-salas@cornell.edu
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘monitoR’
waterfalls (0.1.0)
Maintainer: Hugh Parsonage hugh.parsonage+waterfall@gmail.com
0 errors | 0 warnings | 0 notes
Wats (0.10.3)
Maintainer: Will Beasley wibeasley@hotmail.com
Bug reports: https://github.com/OuhscBbmc/Wats/issues
0 errors | 0 warnings | 0 notes
wbstats (0.1)
Maintainer: Jesse Piburn piburnjo@ornl.gov
0 errors | 0 warnings | 0 notes
wesanderson (0.3.2)
Maintainer: Karthik Ram karthik.ram@gmail.com
Bug reports: https://github.com/karthik/wesanderson/issues
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
print.palette: no visible global function definition for ‘par’
print.palette: no visible global function definition for ‘image’
print.palette: no visible global function definition for ‘rect’
print.palette: no visible global function definition for ‘rgb’
print.palette: no visible global function definition for ‘text’
wes_palette: no visible global function definition for
‘colorRampPalette’
Undefined global functions or variables:
colorRampPalette image par rect rgb text
Consider adding
importFrom("grDevices", "colorRampPalette", "rgb")
importFrom("graphics", "image", "par", "rect", "text")
to your NAMESPACE file.
WHO (0.2)
Maintainer: Eric Persson expersso5@gmail.com
Bug reports: https://www.github.com/expersso/WHO/issues
0 errors | 0 warnings | 0 notes
wikipediatrend (1.1.10)
Maintainer: Peter Meissner retep.meissner@gmail.com
Bug reports: https://github.com/petermeissner/wikipediatrend/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘AnomalyDetection’ ‘BreakoutDetection’
wordbankr (0.2.0)
Maintainer: Mika Braginsky mika.br@gmail.com
Bug reports: http://github.com/langcog/wordbankr/issues
0 errors | 0 warnings | 0 notes
wppExplorer (2.0-0)
Maintainer: Hana Sevcikova hanas@uw.edu
0 errors | 0 warnings | 0 notes
wrswoR.benchmark (0.1-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org
Bug reports: https://github.com/krlmlr/wrswoR.benchmark/issues
0 errors | 0 warnings | 0 notes
wrswoR (1.0-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org
Bug reports: https://github.com/krlmlr/wrswoR/issues
0 errors | 0 warnings | 0 notes
x.ent (1.1.2)
Maintainer: Tien T. Phan phantien84@gmail.com
Bug reports: https://github.com/tienpt/x.ent/issues
1 error | 0 warnings | 0 notes
checking whether package ‘x.ent’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/x.ent.Rcheck/00install.out’ for details.
xgboost (0.4-4)
Maintainer: Tong He hetong007@gmail.com
Bug reports: https://github.com/dmlc/xgboost/issues
0 errors | 0 warnings | 0 notes
XGR (1.0.4)
Maintainer: Hai Fang hfang@well.ox.ac.uk
1 error | 0 warnings | 0 notes
checking whether package ‘XGR’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/XGR.Rcheck/00install.out’ for details.
xkcd (0.0.5)
Maintainer: Emilio Torres-Manzanera torres@uniovi.es
0 errors | 0 warnings | 0 notes
XLConnect (0.2-12)
Maintainer: Martin Studer martin.studer@mirai-solutions.com
Bug reports: https://github.com/miraisolutions/xlconnect/issues
1 error | 0 warnings | 0 notes
checking whether package ‘XLConnect’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/XLConnect.Rcheck/00install.out’ for details.
xtractomatic (3.1.1)
Maintainer: Roy Mendelssohn roy.mendelssohn@noaa.gov
Bug reports: http://www.github.com/rmendels/xtractomatic/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
date lon lat lowLon higLon lowLat higLat
4/23/2003 203.899 19.664 203.899 203.899 19.664 19.664
4/24/2003 204.151 19.821 203.912597 204.389403 18.78051934 20.86148066
4/30/2003 203.919 20.351 203.6793669 204.1586331 18.79728188 21.90471812
5/1/2003 204.229 20.305 203.9943343 204.4636657 18.90440013 21.70559987
Warning: Removed 308 rows containing missing values (geom_path).
Warning: Removed 308 rows containing missing values (geom_path).
Quitting from lines 528-535 (Usingxtractomatic.Rmd)
Error: processing vignette 'Usingxtractomatic.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
xxIRT (1.1.0)
Maintainer: Xiao Luo xluo1986@gmail.com
Bug reports: http://github.com/xluo11/xxIRT
0 errors | 0 warnings | 0 notes
yorkr (0.0.5)
Maintainer: Tinniam V Ganesh tvganesh.85@gmail.com
0 errors | 0 warnings | 0 notes
zebu (0.1.0)
Maintainer: Olivier M. F. Martin olivmrtn@gmail.com
Bug reports: https://github.com/olivmrtn/zebu/issues
0 errors | 0 warnings | 0 notes
zoo (1.7-13)
Maintainer: Achim Zeileis Achim.Zeileis@R-project.org
0 errors | 0 warnings | 0 notes
zooaRch (1.2)
Maintainer: Erik Otarola-Castillo eotarolacastillo@fas.harvard.edu
0 errors | 0 warnings | 0 notes
duthedd/ggplot2 documentation built on May 20, 2019, 11:13 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Setup
Platform
|setting |value | |:--------|:----------------------------| |version |R version 3.3.1 (2016-06-21) | |system |x86_64, darwin13.4.0 | |ui |X11 | |language |(EN) | |collate |en_US.UTF-8 | |tz |America/Mexico_City | |date |2016-11-07 |
Packages
|package | |version |date |source | |:-------------|:--|:----------|:----------|:------------------------------| |covr | |2.2.1 |2016-08-10 |cran (@2.2.1) | |digest | |0.6.10 |2016-08-02 |cran (@0.6.10) | |ggplot2 | |2.1.0 |2016-03-01 |cran (@2.1.0) | |ggplot2movies | |0.0.1 |2015-08-25 |cran (@0.0.1) | |gtable | |0.2.0 |2016-02-26 |cran (@0.2.0) | |hexbin | |1.27.1 |2015-08-19 |cran (@1.27.1) | |Hmisc | |4.0-0 |2016-11-01 |cran (@4.0-0) | |knitr | |1.14.15 |2016-11-07 |Github (yihui/knitr@8cbc61a) | |lazyeval | |0.2.0 |2016-06-12 |cran (@0.2.0) | |mapproj | |1.2-4 |2015-08-03 |cran (@1.2-4) | |maps | |3.1.1 |2016-07-27 |cran (@3.1.1) | |maptools | |0.8-39 |2016-01-30 |cran (@0.8-39) | |multcomp | |1.4-6 |2016-07-14 |cran (@1.4-6) | |plyr | |1.8.4 |2016-06-08 |cran (@1.8.4) | |quantreg | |5.29 |2016-09-04 |cran (@5.29) | |reshape2 | |1.4.2 |2016-10-22 |cran (@1.4.2) | |rmarkdown | |1.1 |2016-10-16 |cran (@1.1) | |scales | |0.4.0.9003 |2016-10-25 |Github (hadley/scales@d58d83a) | |svglite | |1.2.0 |2016-11-04 |cran (@1.2.0) | |testthat | |1.0.2 |2016-04-23 |cran (@1.0.2) | |tibble | |1.2 |2016-08-26 |cran (@1.2) |
Check results
967 packages
|package |version | errors| warnings| notes| |:-----------------------|:-------------|------:|--------:|-----:| |abctools |1.0.4 | 0| 0| 0| |abd |0.2-8 | 0| 0| 0| |ABHgenotypeR |1.0.1 | 0| 0| 0| |ACDm |1.0.4 | 0| 0| 0| |ACSNMineR |0.16.8.25 | 0| 0| 0| |adapr |1.0 | 0| 0| 1| |AdaptGauss |1.2.4 | 0| 0| 0| |adegenet |2.0.1 | 0| 0| 0| |admixturegraph |1.0.1 | 0| 0| 0| |advclust |0.4 | 0| 0| 0| |AFM |1.2.2 | 0| 0| 0| |aimPlot |1.0.0 | 0| 0| 0| |alakazam |0.2.5 | 0| 0| 0| |AlignStat |1.3.1 | 0| 0| 0| |alm |0.4.0 | 0| 0| 2| |alphahull |2.1 | 0| 0| 0| |ameco |0.2.3 | 0| 0| 1| |AmpliconDuo |1.1 | 0| 0| 0| |AmyloGram |1.0 | 0| 0| 0| |ANOM |0.4.3 | 0| 0| 0| |antitrust |0.95.1 | 0| 0| 0| |aop |1.0.0 | 1| 0| 0| |aoristic |0.6 | 0| 0| 2| |apsimr |1.2 | 0| 0| 1| |archetypes |2.2-0 | 0| 0| 2| |archivist |2.1 | 1| 0| 2| |ARPobservation |1.1 | 0| 0| 1| |ARTool |0.10.4 | 0| 0| 0| |asremlPlus |2.0-12 | 0| 0| 1| |asVPC |1.0.2 | 0| 0| 1| |automap |1.0-14 | 0| 0| 2| |BACA |1.3 | 1| 0| 0| |BacArena |1.5.1 | 0| 0| 2| |BACCT |1.0 | 1| 0| 0| |backShift |0.1.3 | 1| 0| 0| |bamdit |3.0.0 | 1| 0| 0| |bayesAB |0.7.0 | 0| 0| 0| |bayesbio |1.0.0 | 0| 0| 0| |BBEST |0.1-6 | 0| 0| 0| |bbmle |1.0.18 | 0| 0| 0| |BCEA |2.2-3 | 1| 0| 1| |BCellMA |0.1 | 0| 0| 0| |Bclim |3.1.0 | 0| 0| 0| |bcp |4.0.0 | 0| 0| 1| |bcrm |0.4.6 | 1| 0| 1| |bde |1.0.1 | 0| 0| 1| |bdscale |2.0.0 | 0| 0| 0| |bdvis |0.2.6 | 0| 0| 0| |benchmark |0.3-6 | 0| 0| 4| |benchmarkme |0.3.0 | 0| 0| 0| |benchmarkmeData |0.3.0 | 0| 0| 0| |bife |0.1 | 0| 0| 0| |binom |1.1-1 | 0| 0| 3| |biogas |1.4.0 | 0| 0| 0| |biogram |1.3 | 0| 1| 0| |Biograph |2.0.6 | 0| 0| 0| |bioinactivation |1.1.3 | 0| 0| 0| |biomod2 |3.3-7 | 0| 0| 0| |BioPET |0.2.0 | 1| 0| 0| |bioplots |0.0.1 | 0| 0| 0| |BioStatR |2.0.0 | 0| 0| 1| |BlandAltmanLeh |0.3.1 | 0| 1| 0| |blkbox |1.0 | 0| 0| 2| |blockseg |0.2 | 0| 0| 0| |blscrapeR |1.0.2 | 0| 0| 0| |bmlm |1.2.1 | 0| 0| 1| |bmmix |0.1-2 | 0| 0| 2| |bodenmiller |0.1 | 0| 0| 1| |bootnet |0.3 | 0| 0| 0| |braidReports |0.5.3 | 0| 0| 0| |brainGraph |0.72.0 | 1| 0| 0| |breakpoint |1.2 | 0| 0| 0| |bridgedist |0.1.0 | 0| 0| 0| |brms |1.1.0 | 1| 0| 0| |broman |0.64-3 | 0| 0| 0| |broom |0.4.1 | 0| 0| 0| |brotli |0.8 | 0| 0| 0| |bsam |1.1.0 | 1| 0| 0| |BTSPAS |2014.0901 | 1| 0| 1| |burnr |0.1.1 | 0| 0| 0| |CALF |0.1.3 | 0| 0| 0| |capm |0.9.1 | 0| 0| 0| |caret |6.0-72 | 0| 0| 1| |caretEnsemble |2.0.0 | 0| 0| 0| |cate |1.0.4 | 1| 0| 0| |catenary |1.1.1 | 0| 0| 0| |Causata |4.2-0 | 0| 0| 5| |cda |2.0.0 | 0| 0| 0| |cdom |0.1.0 | 0| 0| 0| |ChainLadder |0.2.3 | 0| 0| 0| |ChannelAttributionApp |1.1 | 0| 0| 1| |ChaosGame |0.2 | 0| 0| 0| |checkmate |1.8.2 | 0| 0| 0| |choroplethr |3.5.2 | 0| 1| 0| |choroplethrAdmin1 |1.1.0 | 0| 0| 1| |choroplethrMaps |1.0 | 0| 0| 0| |chron |2.3-47 | 0| 0| 0| |CINOEDV |2.0 | 0| 0| 1| |cjoint |2.0.4 | 0| 0| 0| |classify |1.3 | 1| 0| 0| |classyfire |0.1-2 | 0| 0| 1| |clhs |0.5-6 | 0| 0| 0| |clifro |3.0-0 | 0| 1| 0| |ClimClass |2.1.0 | 0| 0| 0| |climwin |1.0.0 | 0| 0| 0| |clusterfly |0.4 | 1| 0| 0| |clusternomics |0.1.0 | 0| 0| 0| |ClusterR |1.0.3 | 0| 0| 0| |clustrd |1.0.2 | 1| 0| 0| |cmaesr |1.0.2 | 0| 0| 0| |cobalt |1.3.0 | 0| 0| 0| |cocoreg |0.1.0 | 0| 0| 0| |codingMatrices |0.2.1 | 0| 0| 0| |codyn |1.1.0 | 0| 0| 0| |coefplot |1.2.4 | 0| 0| 0| |cofeatureR |1.0.1 | 0| 0| 0| |CollapsABEL |0.10.8 | 1| 0| 0| |coloc |2.3-1 | 0| 1| 2| |colormap |0.1.3 | 0| 0| 0| |colorplaner |0.1.3 | 0| 0| 0| |CommT |0.1.1 | 0| 0| 1| |complmrob |0.6.1 | 0| 0| 0| |confidence |1.1-0 | 0| 0| 1| |conformal |0.2 | 0| 0| 0| |Conigrave |0.1.0 | 0| 0| 0| |contoureR |1.0.5 | 0| 0| 0| |cooccur |1.3 | 0| 0| 0| |CopulaDTA |0.0.4 | 0| 1| 0| |corkscrew |1.1 | 0| 0| 0| |corrr |0.2.1 | 1| 0| 0| |cosinor |1.1 | 0| 0| 1| |CosmoPhotoz |0.1 | 0| 0| 1| |countytimezones |1.0.0 | 0| 0| 0| |countyweather |0.1.0 | 0| 0| 0| |covmat |1.0 | 0| 0| 0| |cowplot |0.7.0 | 0| 0| 0| |cplm |0.7-4 | 0| 0| 0| |crawl |2.0.1 | 0| 0| 0| |cricketr |0.0.13 | 0| 0| 0| |crmPack |0.2.0 | 1| 0| 0| |Crossover |0.1-16 | 1| 0| 0| |CRTgeeDR |1.2 | 0| 0| 0| |csp |0.1.0 | 0| 0| 1| |cutoffR |1.0 | 0| 0| 1| |cvxclustr |1.1.1 | 0| 0| 2| |Cyclops |1.2.2 | 0| 0| 0| |cystiSim |0.1.0 | 0| 0| 0| |dae |2.7-20 | 0| 0| 0| |dams |0.2 | 0| 0| 0| |darch |0.12.0 | 0| 0| 2| |darksky |1.0.0 | 0| 0| 0| |data.table |1.9.6 | 1| 0| 0| |DataExplorer |0.2.6 | 0| 0| 0| |dcmr |1.0 | 0| 0| 1| |ddpcr |1.5 | 0| 1| 0| |Deducer |0.7-9 | 1| 0| 0| |DeLorean |1.2.4 | 0| 0| 0| |demi |1.1.2 | 1| 0| 0| |dendextend |1.3.0 | 0| 0| 2| |DengueRT |1.0.1 | 0| 0| 0| |DepthProc |1.0.7 | 0| 0| 0| |DescribeDisplay |0.2.5 | 0| 0| 0| |detzrcr |0.1.2 | 0| 0| 0| |dfexplore |0.2.1 | 0| 0| 1| |DFIT |1.0-2 | 0| 0| 1| |dfpk |1.0 | 0| 0| 0| |dggridR |0.1.11 | 0| 0| 0| |diagis |0.1.0 | 0| 0| 0| |DiallelAnalysisR |0.1.1 | 0| 0| 0| |dielectric |0.2.3 | 0| 0| 3| |diffeR |0.0-4 | 0| 0| 0| |difNLR |0.1.0 | 0| 0| 0| |directlabels |2015.12.16 | 0| 0| 0| |disclapmix |1.6.2 | 0| 0| 0| |diveRsity |1.9.89 | 0| 0| 1| |DiversityOccupancy |1.0.5 | 1| 0| 0| |dlstats |0.0.9 | 0| 0| 0| |dMod |0.3.2 | 0| 0| 0| |doBy |4.5-15 | 0| 0| 0| |DoTC |0.2 | 0| 0| 0| |dotwhisker |0.2.2 | 0| 0| 0| |dpcR |0.3 | 0| 0| 0| |dplyr |0.5.0 | 0| 0| 1| |DrBats |0.1.4 | 0| 0| 0| |drLumi |0.1.2 | 0| 0| 0| |dslice |1.1.5 | 0| 0| 0| |dsm |2.2.13 | 0| 0| 0| |DstarM |0.1.0 | 0| 0| 0| |DTR |1.7 | 0| 0| 0| |DTRlearn |1.2 | 0| 0| 0| |dtwclust |2.3.0 | 0| 0| 0| |dtwSat |0.2.1 | 0| 0| 0| |DVHmetrics |0.3.6 | 0| 0| 0| |DynNom |3.0.1 | 1| 0| 0| |dynr |0.1.7 | 1| 0| 0| |dynsim |1.2.1 | 0| 0| 0| |dynsurv |0.3-3 | 0| 0| 0| |earlywarnings |1.0.59 | 0| 0| 2| |earthtones |0.1.0 | 0| 0| 0| |EasyHTMLReport |0.1.1 | 0| 0| 3| |ecb |0.2 | 1| 1| 0| |ecoengine |1.10.0 | 0| 0| 0| |EcoGenetics |1.2.0-3 | 0| 0| 0| |ecr |1.0.1 | 0| 0| 0| |edarf |1.0.0 | 0| 0| 0| |edeaR |0.4.4 | 0| 0| 0| |edfReader |1.1.1 | 0| 0| 0| |edgar |1.0.6 | 0| 0| 0| |eechidna |0.1 | 1| 0| 0| |EEM |1.1.1 | 0| 0| 0| |eemR |0.1.4 | 0| 0| 0| |eeptools |1.0.0 | 0| 0| 0| |EFDR |0.1.1 | 0| 0| 1| |EffectLiteR |0.4-2 | 0| 0| 0| |ega |1.0.1 | 0| 0| 0| |egcm |1.0.8 | 0| 0| 0| |eiCompare |1.7 | 0| 0| 0| |emil |2.2.6 | 0| 0| 0| |emojifont |0.3.4 | 0| 1| 1| |EmpiricalCalibration |1.2.0 | 0| 0| 0| |emuR |0.1.9 | 0| 0| 0| |enigma |0.2.0 | 0| 0| 0| |enpls |5.0 | 0| 0| 0| |EpiDynamics |0.3.0 | 0| 0| 0| |episensr |0.7.2 | 0| 0| 0| |episheet |0.2.0 | 0| 0| 0| |ESGtoolkit |0.1 | 0| 0| 2| |etl |0.3.3.1 | 0| 0| 0| |etm |0.6-2 | 0| 0| 2| |eurostat |2.2.1 | 0| 0| 0| |evaluate |0.10 | 0| 0| 0| |evolqg |0.2-4 | 0| 0| 0| |Evomorph |0.9 | 0| 0| 0| |explor |0.2.1 | 0| 0| 0| |exploreR |0.1 | 0| 0| 0| |exreport |0.4.1 | 0| 0| 0| |ExtDist |0.6-3 | 0| 0| 1| |extracat |1.7-4 | 0| 0| 0| |eyelinker |0.1 | 0| 0| 0| |eyetrackingR |0.1.6 | 0| 0| 0| |ez |4.4-0 | 0| 0| 0| |ezsim |0.5.5 | 0| 0| 2| |factoextra |1.0.3 | 1| 0| 1| |FAOSTAT |2.0 | 0| 0| 1| |fbroc |0.4.0 | 0| 0| 0| |fermicatsR |1.4 | 0| 0| 0| |FField |0.1.0 | 0| 0| 2| |Fgmutils |0.9.4 | 1| 0| 0| |fheatmap |1.0.1 | 1| 0| 1| |FinCal |0.6.3 | 0| 0| 0| |findviews |0.1.2 | 0| 0| 0| |fishmove |0.3-3 | 0| 0| 1| |fitbitScraper |0.1.7 | 0| 1| 0| |fitcoach |1.0 | 0| 0| 0| |flowr |0.9.10 | 0| 0| 0| |forcats |0.1.1 | 0| 0| 0| |forecast |7.3 | 0| 0| 0| |forestmodel |0.4.0 | 0| 0| 0| |fractional |0.1.3 | 0| 0| 0| |frailtySurv |1.2.2.1 | 0| 0| 0| |FREddyPro |1.0 | 0| 0| 0| |freqparcoord |1.0.1 | 0| 0| 0| |FreqProf |0.0.1 | 0| 0| 0| |freqweights |1.0.2 | 0| 0| 1| |frontiles |1.2 | 0| 0| 1| |fSRM |0.6.4 | 0| 0| 0| |funModeling |1.4 | 1| 0| 0| |funrar |1.0.1 | 0| 0| 0| |futureheatwaves |1.0.1 | 0| 0| 0| |fuzzyforest |1.0.2 | 1| 0| 0| |fuzzyjoin |0.1.2 | 0| 0| 0| |G2Sd |2.1.5 | 1| 0| 0| |gapfill |0.9.3 | 2| 0| 2| |gapmap |0.0.4 | 0| 0| 0| |gapminder |0.2.0 | 0| 0| 0| |gcerisk |16.1.3 | 0| 0| 0| |gcookbook |1.0 | 0| 0| 0| |GDAdata |0.93 | 0| 0| 0| |GenCAT |1.0.3 | 1| 1| 3| |gender |0.5.1 | 0| 0| 1| |geneSLOPE |0.37.0 | 0| 0| 0| |genomeplot |1.0 | 0| 0| 0| |geoknife |1.4.0 | 0| 0| 0| |geomnet |0.1.2.1 | 1| 0| 0| |GERGM |0.10.0 | 0| 0| 0| |GetHFData |1.2.0 | 0| 0| 0| |GetTDData |1.2.4 | 0| 0| 0| |gettingtothebottom |3.2 | 0| 0| 1| |gfcanalysis |1.4 | 0| 0| 0| |GGally |1.2.0 | 2| 0| 1| |ggalt |0.1.1 | 1| 0| 0| |ggbeeswarm |0.5.0 | 0| 0| 0| |ggcorrplot |0.1.1 | 0| 0| 0| |ggdendro |0.1-20 | 0| 0| 0| |ggdmc |0.1.3.5 | 0| 0| 0| |ggenealogy |0.2.0 | 0| 1| 0| |ggExtra |0.5 | 1| 1| 0| |ggfortify |0.2.0 | 1| 0| 1| |ggghost |0.2.1 | 0| 0| 0| |ggiraph |0.3.2 | 0| 0| 0| |gglogo |0.1.2 | 0| 0| 0| |ggloop |0.1.0 | 0| 0| 0| |ggmap |2.6.1 | 0| 0| 0| |ggmcmc |1.1 | 0| 0| 0| |ggnetwork |0.5.1 | 2| 1| 0| |ggparallel |0.1.2 | 0| 0| 0| |ggpmisc |0.2.12 | 1| 1| 0| |ggpolypath |0.1.0 | 0| 0| 0| |ggpubr |0.1.0 | 1| 0| 0| |ggRandomForests |2.0.1 | 0| 0| 0| |ggraptR |0.1 | 0| 0| 0| |ggrepel |0.6.3 | 0| 0| 0| |ggROC |1.0 | 0| 0| 3| |ggsci |1.5 | 0| 0| 0| |ggseas |0.5.1 | 0| 0| 0| |ggsn |0.3.1 | 0| 0| 0| |ggspectra |0.1.10 | 0| 0| 0| |ggswissmaps |0.1.1 | 0| 0| 0| |ggtern |2.1.4 | 1| 0| 0| |ggThemeAssist |0.1.5 | 0| 0| 0| |ggthemes |3.2.0 | 0| 0| 0| |githubinstall |0.1.0 | 0| 0| 0| |gitter |1.1.1 | 1| 0| 0| |glinternet |1.0.0 | 0| 0| 1| |glycanr |0.3.0 | 2| 0| 1| |gmum.r |0.2.1 | 0| 0| 0| |gmwm |2.0.0 | 0| 0| 1| |gogamer |0.4.3 | 0| 0| 0| |googlesheets |0.2.1 | 0| 0| 0| |GOplot |1.0.2 | 0| 0| 0| |gpmap |0.1.1 | 0| 0| 3| |granovaGG |1.4.0 | 0| 0| 0| |Greg |1.2 | 2| 1| 0| |greport |0.7-1 | 1| 0| 0| |gridDebug |0.5-0 | 1| 0| 0| |gridExtra |2.2.1 | 0| 0| 0| |gridsampler |0.5 | 0| 0| 0| |growcurves |0.2.4.0 | 0| 0| 0| |growfunctions |0.13 | 0| 0| 0| |growthcurver |0.2.1 | 0| 0| 0| |gsDesign |3.0-1 | 0| 0| 1| |GSE |4.0 | 0| 0| 0| |gtrendsR |1.3.5 | 0| 0| 0| |gunsales |0.1.1 | 0| 0| 0| |gutenbergr |0.1.2 | 0| 0| 0| |gwdegree |0.1.1 | 0| 0| 0| |gWQS |1.0.0 | 0| 0| 0| |h2o |3.10.0.8 | 0| 0| 1| |hazus |0.1 | 0| 0| 1| |hBayesDM |0.2.3.1 | 0| 0| 0| |hdm |0.2.0 | 0| 0| 0| |hdnom |4.2 | 1| 1| 0| |hdr |0.1 | 0| 0| 0| |heatmaply |0.6.0 | 1| 1| 0| |heemod |0.5.1 | 0| 0| 0| |heuristica |1.0.1 | 0| 0| 0| |hierarchicalDS |2.9 | 0| 0| 1| |hierarchicalSets |1.0.2 | 0| 0| 1| |highcharter |0.4.0 | 0| 0| 0| |HighDimOut |1.0.0 | 0| 0| 1| |HistData |0.7-8 | 0| 0| 1| |HistDAWass |0.1.4 | 0| 0| 0| |historydata |0.1 | 0| 0| 0| |HiveR |0.2.55 | 0| 0| 0| |HLMdiag |0.3.1 | 0| 0| 0| |Hmisc |4.0-0 | 1| 0| 0| |HRM |0.3.5 | 0| 0| 0| |HTSSIP |1.0.3 | 1| 0| 0| |httk |1.4 | 0| 0| 0| |HWxtest |1.1.7 | 0| 0| 0| |hybridModels |0.2.6 | 0| 0| 0| |hyfo |1.3.6 | 0| 0| 0| |hyperSpec |0.98-20150304 | 1| 1| 1| |IAPWS95 |1.0.0 | 1| 0| 0| |IAT |0.3 | 0| 0| 0| |ibmdbR |1.48.0 | 1| 0| 0| |icarus |0.2.2 | 0| 0| 0| |icd9 |1.3.1 | 0| 0| 0| |idm |1.7.1 | 1| 0| 0| |ie2miscdata |1.0.1 | 0| 1| 1| |ifaTools |0.13 | 0| 0| 0| |IGM.MEA |0.3.4 | 0| 0| 0| |imageData |0.1-26 | 1| 0| 0| |imager |0.31 | 0| 1| 1| |IMP |1.1 | 0| 0| 0| |imputeTestbench |3.0.0 | 0| 0| 0| |incidence |1.0.0 | 0| 0| 0| |inctools |1.0.7 | 0| 0| 0| |IncucyteDRC |0.5.4 | 0| 0| 0| |iNEXT |2.0.9 | 0| 1| 0| |Information |0.0.9 | 0| 0| 0| |InformationValue |1.2.3 | 0| 0| 0| |InSilicoVA |1.1.2 | 1| 0| 0| |IntClust |0.0.2 | 1| 0| 0| |IntegratedJM |1.4 | 0| 0| 0| |IntegratedMRF |1.1.5 | 0| 0| 0| |interplot |0.1.4 | 0| 0| 0| |intsvy |1.9 | 0| 0| 0| |IPtoCountry |0.0.1 | 0| 0| 0| |ITEMAN |1.0 | 0| 0| 0| |iWISA |1.0-2 | 0| 0| 0| |JacobiEigen |0.2-2 | 0| 0| 0| |JWileymisc |0.2.1 | 0| 0| 0| |kamila |0.1.1.1 | 0| 0| 0| |kdetrees |0.1.5 | 0| 0| 1| |kfigr |1.2 | 0| 0| 0| |Kmisc |0.5.0 | 0| 0| 1| |knitrBootstrap |1.0.0 | 0| 0| 0| |kobe |1.3.2 | 0| 0| 1| |KSD |1.0.0 | 0| 0| 0| |Lahman |5.0-0 | 0| 0| 1| |LambertW |0.6.4 | 0| 0| 0| |LANDD |1.1.0 | 1| 0| 0| |largeVis |0.1.9.1 | 0| 1| 0| |latex2exp |0.4.0 | 0| 0| 0| |lda |1.4.2 | 0| 0| 0| |ldatuning |0.2.0 | 0| 0| 0| |LDheatmap |0.99-2 | 1| 0| 0| |LEAP |0.2 | 0| 0| 0| |learningCurve |1.0 | 0| 0| 0| |learnstats |0.1.1 | 0| 0| 1| |LexisPlotR |0.3 | 0| 0| 0| |likeLTD |6.1.1 | 0| 0| 0| |likert |1.3.3 | 0| 0| 0| |linear.tools |1.3.0 | 0| 0| 0| |llama |0.9.1 | 1| 0| 0| |lme4 |1.1-12 | 0| 0| 1| |lmerTest |2.0-32 | 0| 0| 0| |lmms |1.3.3 | 0| 0| 0| |localgauss |0.35 | 1| 0| 0| |LocFDRPois |1.0.0 | 0| 0| 1| |logisticPCA |0.2 | 0| 0| 0| |LOGIT |1.3 | 0| 0| 0| |lsbclust |1.0.4 | 0| 0| 0| |lsl |0.5.5 | 0| 0| 0| |ltbayes |0.4 | 1| 0| 0| |lvplot |0.2.0 | 0| 0| 0| |MAc |1.1 | 0| 0| 4| |macleish |0.3.0 | 0| 0| 0| |MAd |0.8-2 | 0| 0| 4| |maddison |0.1 | 0| 0| 0| |magick |0.3 | 1| 0| 0| |manhattanly |0.1.0 | 0| 1| 0| |mapr |0.3.0 | 0| 0| 0| |marked |1.1.11 | 0| 0| 0| |marmap |0.9.5 | 0| 0| 0| |matrixStats |0.51.0 | 0| 0| 0| |MAVIS |1.1.2 | 0| 0| 0| |MaxentVariableSelection |1.0-2 | 0| 0| 0| |MCMC.OTU |1.0.10 | 0| 0| 0| |MCMC.qpcr |1.2.2 | 0| 0| 0| |mcprofile |0.2-3 | 0| 0| 0| |mdsr |0.1.3 | 0| 0| 1| |medicalrisk |1.2 | 0| 0| 0| |medicare |0.1.0 | 0| 0| 0| |MEGENA |1.3.5-2 | 0| 1| 1| |MendelianRandomization |0.2.0 | 1| 0| 0| |MergeGUI |0.2-1 | 1| 0| 0| |merTools |0.2.1 | 0| 0| 0| |metacoder |0.1.2 | 0| 0| 0| |metagen |1.0 | 0| 0| 1| |metaheur |0.2.0 | 0| 0| 0| |MetaIntegrator |1.0.3 | 1| 0| 0| |metaMix |0.2 | 1| 0| 0| |metaplotr |0.0.3 | 0| 0| 0| |meteogRam |1.0 | 0| 0| 1| |Methplot |1.0 | 0| 0| 2| |metricsgraphics |0.9.0 | 0| 0| 0| |MGLM |0.0.7 | 0| 0| 0| |mhtboot |1.3.3 | 0| 0| 0| |microbenchmark |1.4-2.1 | 0| 0| 1| |micromap |1.9.2 | 0| 0| 1| |microplot |1.0-14 | 0| 0| 0| |MiRAnorm |1.0.0 | 0| 0| 0| |miscset |1.0.0 | 0| 0| 0| |MissingDataGUI |0.2-5 | 1| 0| 0| |mistat |1.0-4 | 0| 0| 1| |mistral |2.1.0 | 0| 0| 0| |MIXFIM |1.0 | 0| 0| 0| |mixOmics |6.1.1 | 0| 0| 0| |MixSIAR |3.1.7 | 2| 0| 0| |mizer |0.2 | 0| 0| 1| |mkin |0.9.44 | 0| 0| 0| |mlmc |1.0.0 | 0| 0| 0| |mlr |2.9 | 2| 0| 2| |mlxR |3.1.0 | 0| 0| 0| |Mobilize |2.16-4 | 0| 0| 1| |modelr |0.1.0 | 0| 0| 0| |Momocs |1.1.0 | 0| 0| 0| |moonBook |0.1.3 | 0| 0| 2| |morse |2.2.0 | 1| 0| 0| |mosaic |0.14.4 | 0| 0| 2| |mosaicData |0.14.0 | 0| 0| 0| |mousetrap |2.0.0 | 0| 0| 0| |moveHMM |1.2 | 0| 0| 0| |mplot |0.7.9 | 0| 0| 1| |mpoly |1.0.3 | 0| 0| 0| |mrMLM |1.3 | 1| 0| 0| |MRMR |0.1.4 | 0| 0| 0| |MSCMT |1.0.0 | 0| 0| 0| |MSG |0.3 | 0| 0| 0| |MSGARCH |0.17 | 0| 0| 1| |mtconnectR |1.0.1 | 1| 0| 0| |MultiBD |0.2.0 | 0| 0| 0| |multiDimBio |1.0.1 | 1| 0| 0| |multilevelPSA |1.2.4 | 0| 0| 1| |MultiMeta |0.1 | 0| 0| 1| |multipanelfigure |0.8.3 | 0| 0| 0| |munsell |0.4.3 | 0| 0| 0| |musica |0.1.3 | 0| 0| 0| |mvdalab |1.1 | 0| 0| 0| |mvtboost |0.5.0 | 0| 0| 0| |mwaved |1.1.4 | 1| 0| 0| |myTAI |0.4.0 | 1| 0| 0| |ncappc |0.2.1.1 | 0| 0| 0| |NeatMap |0.3.6.2 | 0| 0| 2| |netgen |1.3 | 0| 0| 0| |networkreporting |0.1.1 | 0| 0| 0| |NeuralNetTools |1.4.0 | 0| 0| 0| |neuropsychology |0.2.4 | 0| 0| 0| |NFP |0.99.1 | 1| 0| 0| |nhstplot |1.0.0 | 0| 0| 0| |nima |0.3.0 | 0| 0| 0| |nimble |0.6-1 | 0| 0| 1| |nlstimedist |1.0.1 | 0| 0| 0| |NlsyLinks |2.0.6 | 0| 0| 1| |nLTT |1.3.1 | 0| 0| 0| |NMF |0.20.6 | 0| 0| 3| |NNTbiomarker |0.29.11 | 0| 0| 0| |NORRRM |1.0.0 | 0| 0| 1| |nparACT |0.6 | 0| 0| 0| |NPflow |0.10.1 | 0| 0| 0| |npregfast |1.3.0 | 1| 0| 0| |nullabor |0.3.1 | 0| 0| 1| |nzelect |0.2.0 | 0| 0| 0| |oapackage |2.0.23 | 0| 0| 0| |oaPlots |0.0.25 | 0| 0| 0| |oaxaca |0.1.3 | 0| 0| 0| |obAnalytics |0.1.0 | 1| 1| 0| |oddsratio |0.3.0 | 1| 1| 0| |OECD |0.2.2 | 0| 0| 0| |onlineCPD |1.0 | 1| 0| 0| |OpasnetUtils |1.2.0 | 0| 0| 1| |OpenStreetMap |0.3.3 | 1| 0| 0| |openVA |1.0.1 | 1| 0| 0| |optiRum |0.37.3 | 0| 0| 0| |orderedLasso |1.7 | 0| 0| 2| |orgR |0.9.0 | 0| 0| 0| |OriGen |1.4.3 | 1| 0| 0| |osmplotr |0.2.3 | 0| 0| 0| |OutbreakTools |0.1-14 | 1| 1| 0| |P2C2M |0.7.6 | 0| 0| 2| |pa |1.2-1 | 0| 0| 2| |packcircles |0.1.1 | 0| 0| 0| |pagenum |1.0 | 0| 0| 0| |PairedData |1.0.1 | 0| 0| 4| |paleofire |1.1.9 | 0| 0| 0| |palettetown |0.1.1 | 0| 0| 0| |pAnalysis |2.0 | 0| 0| 0| |pander |0.6.0 | 0| 1| 1| |ParallelTree |0.1.1 | 0| 0| 0| |ParamHelpers |1.9 | 1| 0| 0| |partialAR |1.0.5 | 0| 0| 1| |PASenseWear |1.0 | 0| 0| 0| |PASWR2 |1.0.2 | 0| 0| 0| |patPRO |1.1.0 | 0| 0| 1| |pauwels2014 |1.0 | 0| 0| 2| |PAWL |0.5 | 0| 0| 4| |PBImisc |1.0 | 0| 0| 0| |pcadapt |3.0.3 | 0| 0| 1| |pcaPA |2.0.2 | 1| 0| 0| |pcrcoal |1.2.0 | 0| 0| 0| |pcrsim |1.0.1 | 1| 0| 0| |PDQutils |0.1.5 | 0| 0| 0| |PedCNV |0.1 | 0| 0| 3| |pems.utils |0.2.17.8 | 0| 0| 0| |peptider |0.2.2 | 0| 0| 0| |pequod |0.0-5 | 0| 0| 0| |performanceEstimation |1.1.0 | 0| 0| 0| |permubiome |1.1 | 0| 0| 0| |perry |0.2.0 | 0| 0| 1| |perspectev |1.1 | 0| 0| 0| |PGRdup |0.2.2.1 | 0| 1| 2| |PhaseType |0.1.3 | 0| 0| 3| |photobiologyInOut |0.4.12 | 0| 1| 0| |photobiologyLamps |0.4.1 | 0| 1| 0| |photobiologyLEDs |0.4.2 | 0| 1| 0| |photobiologyPlants |0.4.0 | 0| 1| 0| |Phxnlme |1.0.0 | 0| 0| 0| |phylopath |0.2.0 | 0| 0| 0| |phylosim |3.0.2 | 0| 0| 0| |physiology |0.2.2 | 0| 0| 0| |pid |0.36 | 0| 0| 0| |pinbasic |0.1.0 | 0| 0| 0| |pipe.design |0.4 | 0| 0| 0| |pitchRx |1.8.2 | 0| 0| 1| |PKgraph |1.7 | 1| 0| 0| |PKreport |1.5 | 0| 0| 1| |planar |1.6 | 0| 0| 0| |PlasmaMutationDetector |1.5.2 | 1| 0| 0| |platetools |0.0.2 | 0| 0| 0| |playwith |0.9-54 | 1| 0| 1| |plotluck |1.0.0 | 1| 1| 0| |plotly |4.5.2 | 2| 0| 0| |plotMElm |0.1.4 | 0| 0| 0| |PlotPrjNetworks |1.0.0 | 0| 0| 0| |plotROC |2.0.1 | 0| 0| 0| |plspm |0.4.7 | 0| 0| 1| |pmc |1.0.2 | 0| 0| 0| |pogit |1.1.0 | 0| 0| 0| |pointRes |1.1.2 | 0| 0| 0| |pollstR |1.4.0 | 0| 0| 0| |pomp |1.9 | 0| 0| 0| |PopED |0.3.1 | 0| 0| 0| |popEpi |0.4.0 | 0| 0| 0| |PopGenReport |2.2.2 | 0| 0| 0| |popgraph |1.4 | 0| 0| 2| |poppr |2.2.1 | 0| 0| 0| |popReconstruct |1.0-4 | 0| 0| 1| |PortfolioEffectHFT |1.7 | 1| 0| 0| |powerbydesign |1.0.3 | 0| 0| 0| |PPtreeViz |1.3.0 | 0| 0| 0| |prcbench |0.5.2 | 2| 1| 0| |precintcon |2.3.0 | 0| 0| 0| |precrec |0.5.2 | 0| 0| 0| |predictionInterval |1.0.0 | 0| 0| 0| |predictmeans |0.99 | 0| 0| 1| |PredictTestbench |1.1.1 | 0| 1| 0| |PReMiuM |3.1.3 | 0| 0| 0| |preprocomb |0.3.0 | 0| 0| 0| |preprosim |0.2.0 | 0| 0| 0| |preproviz |0.2.0 | 0| 0| 0| |preText |0.4.4 | 0| 0| 1| |prevR |3.3 | 0| 0| 1| |pRF |1.2 | 1| 0| 0| |primerTree |1.0.3 | 0| 0| 0| |prism |0.0.7 | 0| 0| 0| |PRISMA |0.2-5 | 0| 0| 1| |productplots |0.1.1 | 0| 0| 0| |profileR |0.3-3 | 0| 0| 0| |profr |0.3.1 | 0| 0| 2| |profvis |0.3.2 | 0| 0| 0| |ProgGUIinR |0.0-4 | 0| 0| 3| |ProjectTemplate |0.7 | 0| 0| 2| |proportion |1.2.3 | 0| 1| 1| |propr |2.0.4 | 0| 0| 0| |proteomics |0.2 | 0| 0| 1| |PRROC |1.1 | 0| 0| 1| |PSAboot |1.1.4 | 0| 0| 0| |PSCBS |0.61.0 | 1| 0| 0| |pscore |0.1-2 | 0| 0| 1| |psd |1.0-1 | 0| 0| 1| |pseval |1.3.0 | 0| 0| 1| |PTXQC |0.80.14 | 0| 0| 1| |pwr |1.2-0 | 0| 0| 0| |pxweb |0.6.3 | 0| 0| 0| |QCAtools |0.2.2 | 0| 0| 0| |QCSimulator |0.0.1 | 0| 0| 0| |qdap |2.2.5 | 1| 0| 0| |qgraph |1.4.0 | 0| 0| 0| |qicharts |0.5.1 | 0| 0| 0| |quadrupen |0.2-4 | 0| 0| 1| |QualInt |1.0.0 | 0| 0| 1| |qualvar |0.1.0 | 0| 0| 0| |quanteda |0.9.8.5 | 1| 0| 0| |QuantumClone |0.16.8.19 | 0| 0| 0| |quickpsy |0.1.4 | 1| 0| 0| |quickReg |1.0.0 | 0| 0| 1| |qwraps2 |0.2.2 | 0| 0| 0| |R2admb |0.7.13 | 0| 0| 1| |r2glmm |0.1.0 | 0| 0| 0| |R6 |2.2.0 | 0| 0| 0| |radiant.basics |0.6.0 | 0| 0| 0| |radiant.data |0.6.0 | 0| 0| 0| |radiant.model |0.6.0 | 1| 0| 0| |radiant.multivariate |0.6.0 | 0| 0| 0| |rags2ridges |2.1.1 | 0| 0| 1| |ragtop |0.5 | 0| 0| 0| |raincpc |0.4 | 0| 0| 1| |rAltmetric |0.6 | 0| 0| 1| |RAM |1.2.1.3 | 0| 0| 2| |randomizeR |1.3 | 0| 0| 0| |randomUniformForest |1.1.5 | 0| 0| 1| |rangeMapper |0.3-0 | 0| 0| 0| |rangemodelR |1.0.1 | 0| 0| 0| |raptr |0.0.1 | 1| 0| 0| |rasterVis |0.40 | 0| 0| 0| |rattle |4.1.0 | 0| 0| 3| |raw |0.1.2 | 0| 0| 0| |rbefdata |0.3.5 | 0| 0| 1| |rbison |0.5.0 | 0| 0| 0| |rbokeh |0.5.0 | 0| 0| 0| |rchess |0.1 | 0| 0| 0| |rclinicaltrials |1.4.1 | 0| 0| 1| |RcmdrPlugin.KMggplot2 |0.2-3 | 0| 0| 0| |RcmdrPlugin.MA |0.0-2 | 0| 0| 0| |RCMIP5 |1.2.0 | 0| 0| 0| |rddtools |0.4.0 | 0| 0| 0| |RDML |0.9-1 | 0| 0| 0| |rdpla |0.1.0 | 0| 0| 0| |RDS |0.7-7 | 0| 0| 0| |reda |0.2.1 | 0| 0| 0| |refund |0.1-16 | 0| 0| 0| |refund.shiny |0.2.0 | 0| 0| 0| |rem |1.1.2 | 0| 0| 0| |repijson |0.1.0 | 0| 0| 0| |replicationInterval |2.0.1 | 0| 0| 0| |ReporteRs |0.8.7 | 1| 0| 0| |reproducer |0.1.6 | 0| 0| 0| |reval |2.0.0 | 0| 0| 0| |rex |1.1.1 | 0| 0| 0| |rfigshare |0.3.7 | 0| 0| 1| |RFinfer |0.2.0 | 0| 0| 0| |rfisheries |0.2 | 0| 0| 0| |RFmarkerDetector |1.0.1 | 0| 0| 0| |rfordummies |0.1.2 | 1| 0| 1| |rfPermute |2.1.5 | 0| 0| 0| |rgbif |0.9.5 | 0| 0| 0| |RGraphics |2.0-14 | 0| 0| 3| |RImagePalette |0.1.1 | 0| 0| 0| |rinat |0.1.4 | 0| 0| 1| |rivr |1.2 | 0| 0| 0| |RJafroc |0.1.1 | 1| 0| 0| |RmarineHeatWaves |0.13.1 | 0| 0| 0| |rmcfs |1.1.2 | 1| 0| 0| |rmetasim |3.0.5 | 0| 0| 0| |rms |5.0-0 | 1| 0| 0| |RndTexExams |1.4 | 0| 0| 0| |rnoaa |0.6.5 | 0| 0| 0| |rnpn |0.1.0 | 0| 0| 0| |rnrfa |1.2 | 0| 0| 0| |robCompositions |2.0.2 | 0| 1| 1| |robmed |0.1.1 | 0| 0| 0| |robustbase |0.92-6 | 0| 0| 1| |RobustEM |1.0 | 0| 0| 1| |robustHD |0.5.1 | 0| 0| 0| |robustlmm |1.8 | 0| 0| 0| |rollply |0.5.0 | 0| 0| 0| |ropenaq |0.1.3 | 0| 0| 0| |rorutadis |0.4.1 | 0| 0| 0| |rotations |1.5 | 0| 0| 0| |rpdo |0.2.0 | 0| 0| 0| |rpf |0.53 | 0| 0| 0| |rplexos |1.1.8 | 0| 0| 0| |rplos |0.6.0 | 0| 0| 0| |RPPanalyzer |1.4.3 | 1| 0| 0| |rPref |1.1 | 0| 0| 2| |rprev |0.2.2 | 0| 0| 0| |rpsftm |1.0.1 | 0| 0| 0| |rrepast |0.5.0 | 1| 0| 0| |RSA |0.9.10 | 0| 1| 0| |rSARP |1.0.0 | 0| 0| 0| |RSDA |1.3 | 0| 0| 0| |rSPACE |1.2.0 | 0| 0| 0| |RSSL |0.6.1 | 0| 0| 0| |rstan |2.12.1 | 1| 0| 0| |rstanarm |2.12.1 | 1| 0| 1| |RStoolbox |0.1.6 | 0| 0| 0| |rsvd |0.6 | 0| 0| 0| |rsvg |1.0 | 1| 0| 0| |rtematres |0.2 | 0| 0| 0| |rtf |0.4-11 | 0| 0| 2| |rtide |0.0.2 | 0| 0| 0| |rtimes |0.3.0 | 0| 0| 0| |rtip |1.0.0 | 0| 0| 0| |RtutoR |0.3 | 0| 0| 0| |rvertnet |0.5.0 | 0| 0| 0| |rWBclimate |0.1.3 | 0| 0| 1| |rwirelesscom |1.4.3 | 0| 0| 0| |rwty |1.0.1 | 0| 0| 0| |ryouready |0.4 | 0| 0| 0| |Rz |0.9-1 | 0| 1| 2| |sadists |0.2.2 | 0| 0| 0| |saeRobust |0.1.0 | 0| 0| 0| |saeSim |0.8.0 | 0| 0| 0| |SamplerCompare |1.2.7 | 0| 0| 0| |sand |1.0.2 | 0| 0| 2| |scanstatistics |0.1.0 | 0| 0| 0| |scdhlm |0.3 | 0| 0| 0| |SCGLR |2.0.3 | 0| 0| 0| |SciencesPo |1.4.1 | 0| 0| 0| |scmamp |0.2.55 | 1| 0| 0| |SDaA |0.1-3 | 0| 0| 1| |sdcMicro |4.6.1 | 0| 0| 0| |SDEFSR |0.7.1.0 | 0| 0| 0| |sdmvspecies |0.3.2 | 0| 0| 0| |season |0.3-5 | 0| 0| 1| |SEERaBomb |2016.1 | 1| 0| 0| |seewave |2.0.5 | 1| 0| 0| |selfea |1.0.1 | 0| 0| 1| |SemiParBIVProbit |3.8 | 0| 0| 0| |sensiPhy |0.5.0 | 0| 0| 0| |sensitivity |1.12.2 | 0| 0| 0| |SensMixed |2.0-10 | 0| 0| 0| |SensusR |2.0.0 | 1| 0| 0| |sentimentr |0.2.3 | 0| 0| 0| |SeqFeatR |0.2.4 | 1| 0| 0| |sgd |1.1 | 0| 0| 0| |sglr |0.7 | 0| 0| 2| |shazam |0.1.4 | 0| 0| 0| |SHELF |1.2.1 | 0| 0| 0| |shiny |0.14.2 | 0| 0| 1| |ShinyItemAnalysis |0.2.0 | 0| 0| 0| |shinystan |2.2.1 | 0| 0| 0| |sidier |3.0.1 | 0| 0| 1| |sigmoid |0.2.0 | 0| 0| 0| |Sim.DiffProc |3.4 | 0| 0| 1| |simcausal |0.5.1 | 0| 1| 0| |SimDesign |1.4 | 0| 0| 1| |simmer |3.5.0 | 0| 1| 0| |simmr |0.3 | 1| 0| 0| |simPH |1.3.9 | 0| 0| 0| |simstudy |0.1.1 | 0| 0| 0| |simTool |1.0.3 | 0| 0| 2| |simulator |0.2.0 | 0| 0| 0| |sitmo |1.0.0 | 0| 0| 0| |SixSigma |0.9-3 | 0| 0| 0| |sjPlot |2.1.1 | 1| 0| 0| |sjstats |0.6.0 | 0| 0| 0| |slackr |1.4.2 | 0| 0| 0| |slim |0.1.0 | 0| 1| 1| |SmarterPoland |1.7 | 0| 0| 1| |SMFI5 |1.0 | 0| 0| 2| |smoof |1.4 | 0| 0| 0| |snht |1.0.4 | 0| 0| 0| |snpEnrichment |1.7.0 | 1| 0| 0| |soc.ca |0.7.3 | 1| 0| 0| |Sofi |0.16.4.8 | 0| 0| 0| |solarius |0.3.0.2 | 0| 0| 0| |sorvi |0.7.26 | 0| 0| 1| |sotkanet |0.9.21 | 0| 0| 0| |sourceR |0.2.0 | 0| 0| 0| |SpaDES |1.3.1 | 0| 0| 1| |sparkTable |1.2.0 | 1| 0| 1| |sparsediscrim |0.2.3 | 0| 0| 0| |SparseFactorAnalysis |1.0 | 0| 0| 0| |sparsereg |1.2 | 0| 0| 0| |sparsevar |0.0.9 | 0| 0| 0| |spatialClust |1.1.1 | 0| 0| 0| |spbabel |0.4.5 | 0| 0| 0| |spcosa |0.3-6 | 1| 0| 0| |specmine |1.0 | 1| 0| 0| |spef |1.0-1 | 0| 0| 0| |spikeSlabGAM |1.1-11 | 0| 0| 0| |SPOT |1.1.0 | 0| 0| 0| |sprm |1.2.2 | 0| 0| 0| |squid |0.1.1 | 0| 0| 0| |srvyr |0.2.0 | 0| 0| 0| |ss3sim |0.9.2 | 0| 0| 0| |starma |1.3 | 0| 0| 0| |starmie |0.1.2 | 1| 0| 0| |statar |0.6.2 | 0| 0| 0| |statcheck |1.2.2 | 0| 0| 0| |statebins |1.2.2 | 0| 0| 0| |StatRank |0.0.6 | 0| 0| 0| |strataG |1.0.5 | 0| 0| 0| |StroupGLMM |0.1.0 | 1| 0| 0| |structSSI |1.1.1 | 1| 0| 0| |strvalidator |1.8.0 | 1| 0| 0| |subspaceMOA |0.5.1 | 1| 0| 0| |SuperLearner |2.0-19 | 0| 0| 1| |surveillance |1.12.1 | 0| 1| 2| |survminer |0.2.2 | 1| 2| 1| |survMisc |0.5.3 | 1| 0| 0| |SurvRank |0.1 | 0| 0| 0| |sValues |0.1.4 | 0| 0| 0| |svdvis |0.1 | 0| 0| 0| |swfscMisc |1.2 | 0| 0| 0| |SWMPr |2.1.7 | 0| 0| 0| |synthpop |1.3-0 | 0| 0| 0| |tableone |0.7.3 | 0| 0| 0| |tabplot |1.3 | 1| 1| 0| |tadaatoolbox |0.10.0 | 0| 0| 0| |taRifx |1.0.6 | 0| 0| 4| |TcGSA |0.10.1 | 1| 0| 0| |tcgsaseq |1.0.1 | 1| 0| 2| |tcR |2.2.1.11 | 0| 0| 1| |tdr |0.11 | 0| 0| 1| |TELP |1.0 | 1| 0| 0| |texmexseq |0.3 | 0| 0| 0| |Thermimage |2.2.3 | 0| 0| 0| |thief |0.2 | 0| 0| 0| |tidyjson |0.2.1 | 0| 0| 1| |tidytext |0.1.2 | 0| 0| 0| |tidyverse |1.0.0 | 0| 0| 0| |tigerstats |0.2.7 | 0| 0| 0| |tigger |0.2.8 | 0| 0| 0| |tigris |0.3.3 | 0| 0| 0| |tikzDevice |0.10-1 | 0| 0| 0| |timeit |0.2.1 | 0| 0| 2| |timeline |0.9 | 0| 0| 2| |timelineS |0.1.1 | 0| 0| 0| |TimeProjection |0.2.0 | 0| 0| 2| |TippingPoint |1.1.0 | 0| 0| 0| |tmap |1.6-1 | 0| 0| 0| |Tmisc |0.1.10 | 0| 0| 0| |toaster |0.5.4 | 1| 0| 0| |tourr |0.5.4 | 0| 0| 2| |tourrGui |0.4 | 0| 0| 4| |toxboot |0.1.1 | 0| 0| 1| |trackeR |0.0.4 | 0| 1| 0| |trapezoid |2.0-0 | 0| 0| 1| |TreatmentSelection |1.2.0 | 0| 0| 0| |treeclim |2.0.0 | 0| 0| 0| |treecm |1.2.2 | 0| 0| 0| |treemap |2.4-1 | 0| 0| 0| |treescape |1.10.17 | 0| 0| 0| |trelliscope |0.9.7 | 0| 0| 1| |TriMatch |0.9.7 | 0| 0| 0| |TripleR |1.5.3 | 0| 0| 0| |TSMining |1.0 | 0| 0| 1| |tspmeta |1.2 | 0| 0| 0| |TSS.RESTREND |0.1.02 | 0| 0| 1| |tufterhandout |1.2.1 | 0| 0| 1| |tvm |0.3.0 | 0| 0| 0| |tweet2r |1.0 | 0| 0| 0| |ubeR |0.1.3 | 0| 0| 0| |UBL |0.0.5 | 1| 0| 0| |ukgasapi |0.13 | 0| 0| 1| |unvotes |0.1.0 | 0| 0| 0| |UpSetR |1.3.0 | 0| 1| 1| |useful |1.2.1 | 0| 0| 0| |userfriendlyscience |0.4-1 | 1| 0| 2| |UsingR |2.0-5 | 1| 0| 0| |varian |0.2.2 | 0| 0| 0| |vcdExtra |0.7-0 | 0| 0| 1| |vcfR |1.2.0 | 0| 0| 0| |VDAP |2.0.0 | 0| 0| 0| |vdg |1.2.0 | 0| 0| 0| |vdmR |0.2.2 | 2| 1| 0| |VetResearchLMM |0.1.0 | 0| 0| 0| |vipor |0.4.4 | 0| 1| 0| |viridis |0.3.4 | 0| 0| 0| |viridisLite |0.1.3 | 0| 0| 0| |visreg |2.3-0 | 0| 0| 0| |vmsbase |2.1.3 | 1| 0| 0| |voxel |1.2.1 | 0| 0| 0| |vrcp |0.1.1 | 0| 0| 0| |VRPM |1.1 | 0| 0| 0| |VSE |0.99 | 0| 0| 0| |vtreat |0.5.28 | 0| 0| 0| |VWPre |0.9.0 | 0| 0| 0| |waffle |0.6.0 | 0| 0| 0| |wakefield |0.3.0 | 0| 0| 0| |walkr |0.3.3 | 0| 0| 0| |warbleR |1.1.2 | 0| 0| 1| |waterfalls |0.1.0 | 0| 0| 0| |Wats |0.10.3 | 0| 0| 0| |wbstats |0.1 | 0| 0| 0| |wesanderson |0.3.2 | 0| 0| 2| |WHO |0.2 | 0| 0| 0| |wikipediatrend |1.1.10 | 0| 0| 1| |wordbankr |0.2.0 | 0| 0| 0| |wppExplorer |2.0-0 | 0| 0| 0| |wrswoR.benchmark |0.1-1 | 0| 0| 0| |wrswoR |1.0-1 | 0| 0| 0| |x.ent |1.1.2 | 1| 0| 0| |xgboost |0.4-4 | 0| 0| 0| |XGR |1.0.4 | 1| 0| 0| |xkcd |0.0.5 | 0| 0| 0| |XLConnect |0.2-12 | 1| 0| 0| |xtractomatic |3.1.1 | 0| 1| 0| |xxIRT |1.1.0 | 0| 0| 0| |yorkr |0.0.5 | 0| 0| 0| |zebu |0.1.0 | 0| 0| 0| |zoo |1.7-13 | 0| 0| 0| |zooaRch |1.2 | 0| 0| 0|
abctools (1.0.4)
Maintainer: Matt Nunes m.nunes@lancaster.ac.uk Bug reports: https://github.com/dennisprangle/abctools/issues
0 errors | 0 warnings | 0 notes
abd (0.2-8)
Maintainer: Kevin M. Middleton middletonk@missouri.edu
0 errors | 0 warnings | 0 notes
ABHgenotypeR (1.0.1)
Maintainer: Stefan Reuscher reuscher.stefan@gmail.com Bug reports: http://github.com/StefanReuscher/ABHgenotypeR/issues
0 errors | 0 warnings | 0 notes
ACDm (1.0.4)
Maintainer: Markus Belfrage markus.belfrage@gmail.com
0 errors | 0 warnings | 0 notes
ACSNMineR (0.16.8.25)
Maintainer: Paul Deveau paul.deveau@curie.fr
0 errors | 0 warnings | 0 notes
adapr (1.0)
Maintainer: Jonathan Gelfond gelfondjal@uthscsa.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘pkgKitten’
AdaptGauss (1.2.4)
Maintainer: Michael Thrun mthrun@mathematik.uni-marburg.de
0 errors | 0 warnings | 0 notes
adegenet (2.0.1)
Maintainer: Thibaut Jombart thibautjombart@gmail.com
0 errors | 0 warnings | 0 notes
admixturegraph (1.0.1)
Maintainer: Thomas Mailund mailund@birc.au.dk Bug reports: https://github.com/mailund/admixture_graph/issues
0 errors | 0 warnings | 0 notes
advclust (0.4)
Maintainer: Achmad Fauzi Bagus F fauzi.pandya@gmail.com
0 errors | 0 warnings | 0 notes
AFM (1.2.2)
Maintainer: Mathieu Beauvais beauvais.escp@gmail.com
0 errors | 0 warnings | 0 notes
aimPlot (1.0.0)
Maintainer: Yusman Kamaleri ybkamaleri@gmail.com
0 errors | 0 warnings | 0 notes
alakazam (0.2.5)
Maintainer: Jason Vander Heiden jason.vanderheiden@yale.edu Bug reports: https://bitbucket.org/kleinstein/alakazam/issues
0 errors | 0 warnings | 0 notes
AlignStat (1.3.1)
Maintainer: Thomas Shafee thomas.shafee@gmail.com Bug reports: https://github.com/TS404/AlignStat/issues
0 errors | 0 warnings | 0 notes
alm (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: http://www.github.com/ropensci/alm/issues
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
alm_events : parse_events: no visible global function definition for
‘setNames’
alm_ids : getalm: no visible global function definition for ‘is’
alm_plot: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
is na.omit setNames
Consider adding
importFrom("methods", "is")
importFrom("stats", "na.omit", "setNames")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking files in ‘vignettes’ ... NOTE
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
alphahull (2.1)
Maintainer: Beatriz Pateiro-Lopez beatriz.pateiro@usc.es
0 errors | 0 warnings | 0 notes
ameco (0.2.3)
Maintainer: Eric Persson expersso5@gmail.com Bug reports: http://github.com/expersso/ameco/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 15.3Mb
sub-directories of 1Mb or more:
data 15.2Mb
AmpliconDuo (1.1)
Maintainer: Anja Lange anja.lange@uni-due.de
0 errors | 0 warnings | 0 notes
AmyloGram (1.0)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com Bug reports: https://github.com/michbur/AmyloGram/issues
0 errors | 0 warnings | 0 notes
ANOM (0.4.3)
Maintainer: Philip Pallmann p.pallmann@lancaster.ac.uk
0 errors | 0 warnings | 0 notes
antitrust (0.95.1)
Maintainer: Charles Taragin charles.taragin@usdoj.gov
0 errors | 0 warnings | 0 notes
aop (1.0.0)
Maintainer: Lyle D. Burgoon Lyle.D.Burgoon@usace.army.mil
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘Rgraphviz’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
aoristic (0.6)
Maintainer: George Kikuchi gkikuchi@csufresno.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
aoristic.all.graph: no visible global function definition for
‘aggregate’
aoristic.density: no visible global function definition for ‘as’
aoristic.density: no visible global function definition for
‘contourLines’
aoristic.density: no visible global function definition for ‘quantile’
aoristic.density: no visible global function definition for ‘aggregate’
aoristic.density: no visible global function definition for ‘slot’
aoristic.density : <anonymous>: no visible global function definition
... 27 lines ...
aggregate as browseURL colorRampPalette contourLines dev.off image
par png quantile slot
Consider adding
importFrom("grDevices", "colorRampPalette", "contourLines", "dev.off",
"png")
importFrom("graphics", "image", "par")
importFrom("methods", "as", "slot")
importFrom("stats", "aggregate", "quantile")
importFrom("utils", "browseURL")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
apsimr (1.2)
Maintainer: Bryan Stanfill bstanfill2003@gmail.com Bug reports: https://github.com/stanfill/apsimr/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘APSIMBatch’
archetypes (2.2-0)
Maintainer: Manuel J. A. Eugster manuel@mjae.net
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘MASS’ ‘TSP’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
archetypes: no visible binding for global variable ‘history’
archmap: no visible global function definition for ‘chull’
archmap: no visible global function definition for ‘plot’
archmap: no visible global function definition for ‘points’
archmap: no visible global function definition for ‘polygon’
archmap: no visible global function definition for ‘text’
atypes_projection: no visible global function definition for ‘cmdscale’
atypes_projection: no visible global function definition for ‘dist’
barplot.archetypes : .below.default: no visible global function
... 80 lines ...
head history layout lines matlines matplot median mtext optim par
plot points polygon rgb rnorm sd solve_TSP symbols tail text
Consider adding
importFrom("grDevices", "chull", "gray", "rgb")
importFrom("graphics", "abline", "arrows", "axis", "box", "layout",
"lines", "matlines", "matplot", "mtext", "par", "plot",
"points", "polygon", "symbols", "text")
importFrom("stats", "cmdscale", "dist", "ecdf", "median", "optim",
"rnorm", "sd")
importFrom("utils", "combn", "head", "history", "tail")
to your NAMESPACE file.
archivist (2.1)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com Bug reports: https://github.com/pbiecek/archivist/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘archivist-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aread
> ### Title: Read Artifacts Given as md5hashes from the Repository
> ### Aliases: aread
>
> ### ** Examples
>
> # read the object from local directory
> setLocalRepo(system.file("graphGallery", package = "archivist"))
> pl <- aread("f05f0ed0662fe01850ec1b928830ef32")
> # plot it
> pl
Error: ScalesList was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘archivist.github’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘archivist.github’
ARPobservation (1.1)
Maintainer: James E. Pustejovsky jepusto@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
E_logitnorm : <anonymous>: no visible global function definition for
‘integrate’
F_const : <anonymous>: no visible global function definition for
‘runif’
F_exp : <anonymous>: no visible global function definition for ‘rexp’
F_gam : <anonymous>: no visible global function definition for ‘rgamma’
F_gam_mix : <anonymous>: no visible global function definition for
‘rbinom’
F_gam_mix : <anonymous>: no visible global function definition for
... 41 lines ...
‘uniroot’
rweibull_eq: no visible global function definition for ‘runif’
smooth_cov: no visible global function definition for ‘dist’
Undefined global functions or variables:
aggregate dist integrate nobs pgamma qnorm quantile rbinom rexp
rgamma rnorm runif rweibull uniroot var
Consider adding
importFrom("stats", "aggregate", "dist", "integrate", "nobs", "pgamma",
"qnorm", "quantile", "rbinom", "rexp", "rgamma", "rnorm",
"runif", "rweibull", "uniroot", "var")
to your NAMESPACE file.
ARTool (0.10.4)
Maintainer: Matthew Kay mjskay@umich.edu Bug reports: https://github.com/mjskay/ARTool/issues/new
0 errors | 0 warnings | 0 notes
asremlPlus (2.0-12)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘asreml’
asVPC (1.0.2)
Maintainer: Eun-Kyung Lee lee.eunk@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
VPC.graph : findQuantile: no visible global function definition for
‘quantile’
VPC.graph : findQuantileCI : <anonymous>: no visible global function
definition for ‘quantile’
asVPC.binW: no visible global function definition for ‘median’
asVPC.binW : <anonymous>: no visible global function definition for
‘quantile’
asVPC.binW: no visible global function definition for ‘quantile’
asVPC.distanceW: no visible global function definition for ‘median’
asVPC.distanceW : <anonymous>: no visible global function definition
for ‘quantile’
asVPC.distanceW: no visible global function definition for ‘quantile’
makeCOVbin: no visible global function definition for ‘quantile’
makeCOVbin: no visible global function definition for ‘median’
read_Simdata: no visible global function definition for ‘read.table’
Undefined global functions or variables:
median quantile read.table
Consider adding
importFrom("stats", "median", "quantile")
importFrom("utils", "read.table")
to your NAMESPACE file.
automap (1.0-14)
Maintainer: Paul Hiemstra paul@numbertheory.nl
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘gpclib’ ‘maptools’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
autoKrige: no visible global function definition for ‘as.formula’
autofitVariogram: no visible global function definition for
‘modifyList’
autofitVariogram: no visible global function definition for ‘is’
autofitVariogram: no visible global function definition for ‘median’
autokrige.vgm.panel: no visible global function definition for ‘grey’
compare.cv: no visible global function definition for ‘quantile’
create_new_data: no visible global function definition for ‘chull’
cv.compare.ggplot: no visible global function definition for ‘ggplot’
... 29 lines ...
geom_path geom_point ggplot grey is median modifyList qnorm quantile
scale_color_gradient2 scale_size_continuous scale_x_continuous
scale_y_continuous sd
Consider adding
importFrom("grDevices", "chull", "grey")
importFrom("methods", "is")
importFrom("stats", "IQR", "as.formula", "cor", "median", "qnorm",
"quantile", "sd")
importFrom("utils", "modifyList")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
BACA (1.3)
Maintainer: Vittorio Fortino vittorio.fortino@ttl.fi
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RDAVIDWebService’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
BacArena (1.5.1)
Maintainer: Johannes Zimmermann j.zimmermann@iem.uni-kiel.de Bug reports: https://github.com/euba/BacArena/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sybilSBML’
checking R code for possible problems ... NOTE
plotCurves2,Eval: no visible global function definition for ‘matplot’
plotTotFlux,Eval: no visible global function definition for ‘matplot’
statPheno,Eval: no visible global function definition for ‘matplot’
statSpec,Eval: no visible global function definition for ‘matplot’
Undefined global functions or variables:
matplot
Consider adding
importFrom("graphics", "matplot")
to your NAMESPACE file.
BACCT (1.0)
Maintainer: Hongtao Zhang hongtao.zhang@abbvie.com
1 error | 0 warnings | 0 notes
checking whether package ‘BACCT’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/BACCT.Rcheck/00install.out’ for details.
backShift (0.1.3)
Maintainer: Christina Heinze heinze@stat.math.ethz.ch Bug reports: https://github.com/christinaheinze/backShift/issues
1 error | 0 warnings | 0 notes
checking whether package ‘backShift’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/backShift.Rcheck/00install.out’ for details.
bamdit (3.0.0)
Maintainer: Pablo Emilio Verde pabloemilio.verde@hhu.de
1 error | 0 warnings | 0 notes
checking whether package ‘bamdit’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/bamdit.Rcheck/00install.out’ for details.
bayesAB (0.7.0)
Maintainer: Frank Portman frank1214@gmail.com Bug reports: https://github.com/FrankPortman/bayesAB/issues
0 errors | 0 warnings | 0 notes
bayesbio (1.0.0)
Maintainer: Andrew McKenzie amckenz@gmail.com
0 errors | 0 warnings | 0 notes
BBEST (0.1-6)
Maintainer: Anton Gagin av.gagin@gmail.com
0 errors | 0 warnings | 0 notes
bbmle (1.0.18)
Maintainer: Ben Bolker bolker@mcmaster.ca
0 errors | 0 warnings | 0 notes
BCEA (2.2-3)
Maintainer: Gianluca Baio gianluca@stats.ucl.ac.uk
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘BCEA-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: evppi
> ### Title: Expected Value of Perfect Partial Information (EVPPI) for
> ### selected parameters
> ### Aliases: evppi evppi.default
> ### Keywords: Health economic evaluation Expected value of partial
... 12 lines ...
> #
> # Runs the health economic evaluation using BCEA
> m <- bcea(e,c,ref=2,interventions=treats)
> #
> # Computes the EVPPI for a bunch of parameters
> inp <- CreateInputs(vaccine)
Error in CreateInputs(vaccine) :
You need to install the package 'R2jags'. Please run in your R terminal:
install.packages('R2jags')
Execution halted
** found \donttest examples: check also with --run-donttest
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘INLA’
BCellMA (0.1)
Maintainer: Olena Ohlei olena.ohlei@student.uni-luebeck.de
0 errors | 0 warnings | 0 notes
Bclim (3.1.0)
Maintainer: Andrew Parnell Andrew.Parnell@ucd.ie
0 errors | 0 warnings | 0 notes
bcp (4.0.0)
Maintainer: John W. Emerson john.emerson@yale.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘DNAcopy’
bcrm (0.4.6)
Maintainer: Michael Sweeting mjs212@medschl.cam.ac.uk
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘bcrm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bcrm
> ### Title: Bayesian Continual Reassessment Method for Phase I
> ### Dose-Escalation Trials
> ### Aliases: bcrm
>
... 133 lines ...
> ## Using rjags (requires JAGS to be installed)
> TwoPLogistic.mean.bcrm<-bcrm(stop=list(nmax=18),data=data,sdose=sdose
+ ,dose=dose,ff="logit2",prior.alpha=list(4,mu,Sigma),target.tox=target.tox
+ ,constrain=FALSE,pointest="mean",method="rjags")
Error: .onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/hadley/R-revdep/rjags/libs/rjags.so':
dlopen(/Users/hadley/R-revdep/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: /Users/hadley/R-revdep/rjags/libs/rjags.so
Reason: image not found
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
bde (1.0.1)
Maintainer: Guzman Santafe guzman.santafe@unavarra.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
mise: no visible global function definition for ‘integrate’
density,BrVitale : density.vitale : <anonymous>: no visible global
function definition for ‘dbeta’
density,Chen99Kernel : <anonymous>: no visible global function
definition for ‘dbeta’
density,HirukawaJLNKernel : <anonymous>: no visible global function
definition for ‘dbeta’
density,MicroBetaChen99Kernel : <anonymous>: no visible global function
definition for ‘dbeta’
... 19 lines ...
‘dbeta’
setNormalizationConstants,MicroBetaChen99Kernel : <anonymous>: no
visible global function definition for ‘integrate’
show,BoundedDensity: no visible global function definition for ‘str’
show,KernelDensity: no visible global function definition for ‘str’
Undefined global functions or variables:
dbeta integrate runif str
Consider adding
importFrom("stats", "dbeta", "integrate", "runif")
importFrom("utils", "str")
to your NAMESPACE file.
bdscale (2.0.0)
Maintainer: Dave Mills dave.a.mills@gmail.com
0 errors | 0 warnings | 0 notes
bdvis (0.2.6)
Maintainer: Vijay Barve vijay.barve@gmail.com
0 errors | 0 warnings | 0 notes
benchmark (0.3-6)
Maintainer: Manuel J. A. Eugster manuel@mjae.net
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Rgraphviz’
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘multcomp’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
as.dataset: no visible global function definition for ‘terms’
as.dataset: no visible global function definition for ‘as.formula’
as.psychobench: no visible global function definition for ‘is’
as.psychobench: no visible global function definition for ‘reshape’
benchmark: no visible global function definition for ‘as.formula’
benchmark: no visible global function definition for ‘predict’
benchmark: no visible global function definition for ‘na.omit’
beplot0.AlgorithmPerformance : <anonymous>: no visible global function
definition for ‘legend’
... 81 lines ...
theme_text value
Consider adding
importFrom("grDevices", "col2rgb", "gray", "rgb")
importFrom("graphics", "abline", "axis", "barplot", "box", "layout",
"legend", "lines", "mtext", "par", "points", "rect",
"segments")
importFrom("methods", "is", "new")
importFrom("stats", "as.formula", "cancor", "lm", "median", "na.omit",
"predict", "reshape", "terms")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘graph’
benchmarkme (0.3.0)
Maintainer: Colin Gillespie csgillespie@gmail.com Bug reports: https://github.com/csgillespie/benchmarkme/issues
0 errors | 0 warnings | 0 notes
benchmarkmeData (0.3.0)
Maintainer: Colin Gillespie csgillespie@gmail.com Bug reports: https://github.com/csgillespie/benchmarkme-data/issues
0 errors | 0 warnings | 0 notes
bife (0.1)
Maintainer: Amrei Stammann amrei.stammann@hhu.de
0 errors | 0 warnings | 0 notes
binom (1.1-1)
Maintainer: Sundar Dorai-Raj sdorairaj@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘lattice’ ‘polynom’ ‘tcltk’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
binom.bayes: no visible global function definition for ‘qbeta’
binom.bayes: no visible global function definition for ‘pbeta’
binom.bayes.densityplot: no visible global function definition for
‘ggplot’
binom.bayes.densityplot: no visible global function definition for
‘aes_string’
binom.bayes.densityplot: no visible global function definition for
‘geom_polygon’
binom.bayes.densityplot: no visible global function definition for
... 167 lines ...
tkpack tkradiobutton tkscale tktoplevel tkwm.title trellis.par.get
trellis.par.set uniroot xlab xlim xyplot ylab ylim
Consider adding
importFrom("grDevices", "heat.colors")
importFrom("graphics", "abline", "axis", "box", "legend", "lines",
"plot")
importFrom("stats", "aggregate", "approx", "binomial", "dbeta",
"dbinom", "dnorm", "optim", "pbeta", "pnorm", "predict",
"qbeta", "qnorm", "rbinom", "reorder", "spline", "uniroot")
importFrom("utils", "find")
to your NAMESPACE file.
biogas (1.4.0)
Maintainer: Sasha D. Hafner saha@kbm.sdu.dk
0 errors | 0 warnings | 0 notes
biogram (1.3)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com Bug reports: https://github.com/michbur/biogram/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: slam
Quitting from lines 15-40 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
formal argument "panel.grid.major" matched by multiple actual arguments
Execution halted
Biograph (2.0.6)
Maintainer: Frans Willekens willekens@nidi.nl
0 errors | 0 warnings | 0 notes
bioinactivation (1.1.3)
Maintainer: Alberto Garre garre.alberto@gmail.com
0 errors | 0 warnings | 0 notes
biomod2 (3.3-7)
Maintainer: Damien Georges damien.georges2@gmail.com Bug reports: https://r-forge.r-project.org/R/?group_id=302
0 errors | 0 warnings | 0 notes
BioPET (0.2.0)
Maintainer: Jeremy Roth jhroth@uw.edu
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘BioPET-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: enrichment_analysis
> ### Title: Prognostic Enrichment with Real Data
> ### Aliases: enrichment_analysis
>
> ### ** Examples
>
> data(dcaData)
>
> ## using a single biomarker in the dataset
> analysis.single.marker <- enrichment_analysis(Cancer ~ Marker1,
+ data=dcaData,
+ reduction.under.treatment=0.3,
+ cost.screening=100,
+ cost.keeping=1000)
Warning in mean.default(response) :
argument is not numeric or logical: returning NA
Error: Unsupported use of matrix or array for column indexing
Execution halted
bioplots (0.0.1)
Maintainer: Jianqiang Sun wukong@bi.a.u-tokyo.ac.jp
0 errors | 0 warnings | 0 notes
BioStatR (2.0.0)
Maintainer: Frederic Bertrand frederic.bertrand@math.unistra.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
binom.ci : bc: no visible global function definition for ‘qf’
binom.ci : bc: no visible global function definition for ‘qnorm’
cvar: no visible global function definition for ‘sd’
eta2: no visible global function definition for ‘lm’
eta2: no visible global function definition for ‘as.formula’
gg_qqplot: no visible binding for global variable ‘qnorm’
gg_qqplot: no visible global function definition for ‘quantile’
panel.hist: no visible global function definition for ‘par’
panel.hist: no visible global function definition for ‘hist’
panel.hist: no visible global function definition for ‘rect’
plotcdf2: no visible global function definition for ‘colorRampPalette’
plotcdf2 : jet.colors: no visible global function definition for ‘gray’
plotcdf2: no visible global function definition for ‘persp’
poi.ci: no visible global function definition for ‘qchisq’
Undefined global functions or variables:
as.formula colorRampPalette gray hist lm par persp qchisq qf qnorm
quantile rect sd
Consider adding
importFrom("grDevices", "colorRampPalette", "gray")
importFrom("graphics", "hist", "par", "persp", "rect")
importFrom("stats", "as.formula", "lm", "qchisq", "qf", "qnorm",
"quantile", "sd")
to your NAMESPACE file.
BlandAltmanLeh (0.3.1)
Maintainer: Bernhard Lehnert bernhard.lehnert@uni-greifswald.de
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 171-174 (Intro.Rmd)
Error: processing vignette 'Intro.Rmd' failed with diagnostics:
Don't know how to add o to a plot
Execution halted
blkbox (1.0)
Maintainer: Boris Guennewig b.guennewig@garvan.org.au
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘bigrf’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
blockseg (0.2)
Maintainer: Julien Chiquet julien.chiquet@gmail.com
0 errors | 0 warnings | 0 notes
blscrapeR (1.0.2)
Maintainer: Kris Eberwein eberwein@knights.ucf.edu Bug reports: https://github.com/keberwein/blscrapeR/issues
0 errors | 0 warnings | 0 notes
bmlm (1.2.1)
Maintainer: Matti Vuorre mv2521@columbia.edu Bug reports: http://github.com/mvuorre/bmlm/issues/
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
bmmix (0.1-2)
Maintainer: Thibaut Jombart t.jombart@imperial.ac.uk
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
bmmix : LL.y: no visible global function definition for ‘dmultinom’
bmmix : LL.x : <anonymous>: no visible global function definition for
‘dmultinom’
bmmix : LPrior.alpha: no visible global function definition for ‘dexp’
bmmix : alpha.move: no visible global function definition for ‘rnorm’
bmmix : alpha.move: no visible global function definition for ‘runif’
bmmix : phi.move: no visible global function definition for ‘rnorm’
bmmix : phi.move: no visible global function definition for ‘runif’
bmmix: no visible global function definition for ‘read.table’
Undefined global functions or variables:
dexp dmultinom read.table rnorm runif
Consider adding
importFrom("stats", "dexp", "dmultinom", "rnorm", "runif")
importFrom("utils", "read.table")
to your NAMESPACE file.
bodenmiller (0.1)
Maintainer: Yann Abraham yann.abraham@gmail.com Bug reports: https://github.com/yannabraham/bodenmiller/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.9Mb
sub-directories of 1Mb or more:
data 8.7Mb
bootnet (0.3)
Maintainer: Sacha Epskamp mail@sachaepskamp.com
0 errors | 0 warnings | 0 notes
braidReports (0.5.3)
Maintainer: Nathaniel R. Twarog nathaniel.twarog@stjude.org
0 errors | 0 warnings | 0 notes
brainGraph (0.72.0)
Maintainer: Christopher G. Watson cgwatson@bu.edu Bug reports: https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
1 error | 0 warnings | 0 notes
checking whether package ‘brainGraph’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/brainGraph.Rcheck/00install.out’ for details.
breakpoint (1.2)
Maintainer: Priyadarshana W.J.R.M. mjayawardana@swin.edu.au
0 errors | 0 warnings | 0 notes
bridgedist (0.1.0)
Maintainer: Bruce Swihart bruce.swihart@gmail.com Bug reports: http://github.com/swihart/bridgedist/issues
0 errors | 0 warnings | 0 notes
brms (1.1.0)
Maintainer: Paul-Christian Buerkner paul.buerkner@gmail.com Bug reports: https://github.com/paul-buerkner/brms/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
23: FUN(X[[i]], ...)
24: element_render(theme = theme, element = paste0("axis.title.", label, modify), label = labels[[label]][[i]],
expand_x = label == "y", expand_y = label == "x") at /Users/hadley/Documents/ggplot/ggplot2/R/layout.R:176
25: calc_element(element, theme) at /Users/hadley/Documents/ggplot/ggplot2/R/theme-elements.r:149
26: Reduce(combine_elements, parents, theme[[element]]) at /Users/hadley/Documents/ggplot/ggplot2/R/theme.r:538
27: f(init, x[[i]])
testthat results ================================================================
OK: 857 SKIPPED: 1 FAILED: 1
1. Error: plotting functions don't throw unexpected errors (@tests.plots.R#11)
Error: testthat unit tests failed
Execution halted
broman (0.64-3)
Maintainer: Karl W Broman kbroman@biostat.wisc.edu
0 errors | 0 warnings | 0 notes
broom (0.4.1)
Maintainer: David Robinson admiral.david@gmail.com Bug reports: http://github.com/dgrtwo/broom/issues
0 errors | 0 warnings | 0 notes
brotli (0.8)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu Bug reports: http://github.com/jeroenooms/brotli/issues
0 errors | 0 warnings | 0 notes
bsam (1.1.0)
Maintainer: Ian Jonsen ian.jonsen@mq.edu.au Bug reports: https://github.com/ianjonsen/bsam/issues
1 error | 0 warnings | 0 notes
checking whether package ‘bsam’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/bsam.Rcheck/00install.out’ for details.
BTSPAS (2014.0901)
Maintainer: Carl J Schwarz cschwarz@stat.sfu.ca
1 error | 0 warnings | 1 note
checking whether package ‘BTSPAS’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/BTSPAS.Rcheck/00install.out’ for details.
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
burnr (0.1.1)
Maintainer: Steven Malevich malevich@email.arizona.edu Bug reports: https://github.com/ltrr-arizona-edu/burnr/issues
0 errors | 0 warnings | 0 notes
CALF (0.1.3)
Maintainer: Stephanie Lane slane@unc.edu
0 errors | 0 warnings | 0 notes
capm (0.9.1)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
caret (6.0-72)
Maintainer: Max Kuhn mxkuhn@gmail.com Bug reports: https://github.com/topepo/caret/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.0Mb
sub-directories of 1Mb or more:
data 1.5Mb
models 2.2Mb
caretEnsemble (2.0.0)
Maintainer: Zachary A. Deane-Mayer zach.mayer@gmail.com Bug reports: https://github.com/zachmayer/caretEnsemble/issues
0 errors | 0 warnings | 0 notes
cate (1.0.4)
Maintainer: Qingyuan Zhao qyzhao@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘sva’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
catenary (1.1.1)
Maintainer: Jonathan Tuke simon.tuke@adelaide.edu.au
0 errors | 0 warnings | 0 notes
Causata (4.2-0)
Maintainer: Justin Hemann justinh@causata.com
0 errors | 0 warnings | 5 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking top-level files ... NOTE
Non-standard file/directory found at top level:
‘integration_tests’
checking R code for possible problems ... NOTE
BinaryCut: no visible global function definition for ‘quantile’
CleanNaFromContinuousFunction: no visible global function definition
for ‘median’
CleanNaFromContinuousFunction: no visible global function definition
for ‘na.omit’
GetMetadata.Connect: no visible global function definition for
‘dbGetQuery’
GetRawData.Connect: no visible global function definition for
‘dbGetQuery’
... 12 lines ...
‘contrasts’
predict.GlmnetModelDefinition: no visible global function definition
for ‘predict’
Undefined global functions or variables:
coef contrasts dbGetQuery median model.matrix na.omit predict
quantile read.csv sd terms.formula
Consider adding
importFrom("stats", "coef", "contrasts", "median", "model.matrix",
"na.omit", "predict", "quantile", "sd", "terms.formula")
importFrom("utils", "read.csv")
to your NAMESPACE file.
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
inst/doc/Makefile
Some ‘make’ programs ignore lines not ending in LF.
checking files in ‘vignettes’ ... NOTE
The following files look like leftovers/mistakes:
‘Causata-vignette.log’
Please remove them from your package.
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
cda (2.0.0)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com Bug reports: https://github.com/baptiste/cda/issues
0 errors | 0 warnings | 0 notes
cdom (0.1.0)
Maintainer: Philippe Massicotte pm@bios.au.dk Bug reports: https://github.com/PMassicotte/cdom/issues
0 errors | 0 warnings | 0 notes
ChainLadder (0.2.3)
Maintainer: Markus Gesmann markus.gesmann@googlemail.com Bug reports: https://github.com/mages/ChainLadder/issues
0 errors | 0 warnings | 0 notes
ChannelAttributionApp (1.1)
Maintainer: Davide Altomare davide.altomare@gmail.com
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Checking should be performed on sources prepared by ‘R CMD build’.
ChaosGame (0.2)
Maintainer: Manuela Schreyer manuelalarissa.schreyer@sbg.ac.at
0 errors | 0 warnings | 0 notes
checkmate (1.8.2)
Maintainer: Michel Lang michellang@gmail.com Bug reports: https://github.com/mllg/checkmate/issues
0 errors | 0 warnings | 0 notes
choroplethr (3.5.2)
Maintainer: Ari Lamstein arilamstein@gmail.com Bug reports: https://github.com/arilamstein/choroplethr/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
• KN = Know Nothing
• AM = Anti-Masonic
• N = Nullifier
... 8 lines ...
Taken from <URL:
http://en.wikipedia.org/wiki/List_of_United_States_presidential_election_results_by_state>
3/20/2014.
Loading required package: lattice
Quitting from lines 33-61 (h-creating-your-own-maps.Rmd)
Error: processing vignette 'h-creating-your-own-maps.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
choroplethrAdmin1 (1.1.0)
Maintainer: Ari Lamstein arilamstein@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 18.0Mb
sub-directories of 1Mb or more:
data 17.9Mb
choroplethrMaps (1.0)
Maintainer: Ari Lamstein arilamstein@gmail.com Bug reports: https://github.com/trulia/choroplethrMaps/issues
0 errors | 0 warnings | 0 notes
chron (2.3-47)
Maintainer: Kurt Hornik Kurt.Hornik@R-project.org
0 errors | 0 warnings | 0 notes
CINOEDV (2.0)
Maintainer: Junliang Shang shangjunliang110@163.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
BatCINOEDV: no visible global function definition for ‘graphics.off’
CoInformation: no visible global function definition for ‘combn’
CombinationEntropy: no visible global function definition for ‘hist’
ConstructCompleteGraph: no visible global function definition for
‘dev.new’
ConstructCompleteGraph: no visible global function definition for ‘par’
ConstructCompleteGraph: no visible global function definition for
‘plot’
DegreeAnalysis: no visible global function definition for ‘dev.new’
... 19 lines ...
PlotTopEffects: no visible global function definition for ‘title’
Undefined global functions or variables:
barplot combn dev.new graphics.off hist install.packages layout lines
par plot rainbow runif title
Consider adding
importFrom("grDevices", "dev.new", "graphics.off", "rainbow")
importFrom("graphics", "barplot", "hist", "layout", "lines", "par",
"plot", "title")
importFrom("stats", "runif")
importFrom("utils", "combn", "install.packages")
to your NAMESPACE file.
cjoint (2.0.4)
Maintainer: Anton Strezhnev astrezhnev@fas.harvard.edu
0 errors | 0 warnings | 0 notes
classify (1.3)
Maintainer: Dr Chris Wheadon chris.wheadon@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘classify’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/classify.Rcheck/00install.out’ for details.
classyfire (0.1-2)
Maintainer: Eleni Chatzimichali ea.chatzimichali@gmail.com Bug reports: https://github.com/eaHat/classyfire/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.boxRadial: no visible global function definition for ‘predict’
.radialSVM: no visible global function definition for ‘predict’
cfPredict: no visible global function definition for ‘predict’
getPerm5Num: no visible global function definition for ‘median’
getPerm5Num: no visible global function definition for ‘quantile’
ggClassPred: no visible global function definition for ‘ftable’
ggEnsHist: no visible global function definition for ‘sd’
ggPermHist: no visible global function definition for ‘sd’
Undefined global functions or variables:
ftable median predict quantile sd
Consider adding
importFrom("stats", "ftable", "median", "predict", "quantile", "sd")
to your NAMESPACE file.
clhs (0.5-6)
Maintainer: Pierre Roudier roudierp@landcareresearch.co.nz
0 errors | 0 warnings | 0 notes
clifro (3.0-0)
Maintainer: Blake Seers blake.seers@gmail.com Bug reports: https://github.com/ropensci/clifro/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: ggplot2
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=Auckland&zoom=8&size=640x640&scale=2&maptype=hybrid&language=en-EN&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=Auckland&sensor=false
Quitting from lines 136-154 (cfStation.Rmd)
Error: processing vignette 'cfStation.Rmd' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ClimClass (2.1.0)
Maintainer: Emanuele Eccel emanuele.eccel@fmach.it
0 errors | 0 warnings | 0 notes
climwin (1.0.0)
Maintainer: Liam D. Bailey liam.bailey@anu.edu.au Bug reports: https://github.com/LiamDBailey/climwin/issues
0 errors | 0 warnings | 0 notes
clusterfly (0.4)
Maintainer: Hadley Wickham h.wickham@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘rggobi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
clusternomics (0.1.0)
Maintainer: Evelina Gabasova egabasova@gmail.com Bug reports: https://github.com/evelinag/clusternomics/issues
0 errors | 0 warnings | 0 notes
ClusterR (1.0.3)
Maintainer: Lampros Mouselimis mouselimislampros@gmail.com Bug reports: https://github.com/mlampros/ClusterR/issues
0 errors | 0 warnings | 0 notes
clustrd (1.0.2)
Maintainer: Angelos Markos amarkos@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘clustrd-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cluspca
> ### Title: Joint dimension reduction and clustering of continuous data.
> ### Aliases: cluspca
>
> ### ** Examples
>
> data(macro)
> outRKM = cluspca(macro, 3, 2, method = "RKM", rotation = "varimax")
> plot(outRKM, cludesc = TRUE)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
cmaesr (1.0.2)
Maintainer: Jakob Bossek j.bossek@gmail.com Bug reports: https://github.com/jakobbossek/cmaesr/issues
0 errors | 0 warnings | 0 notes
cobalt (1.3.0)
Maintainer: Noah Greifer noah@unc.edu
0 errors | 0 warnings | 0 notes
cocoreg (0.1.0)
Maintainer: Jussi Korpela jussi.korpela@iki.fi
0 errors | 0 warnings | 0 notes
codingMatrices (0.2.1)
Maintainer: Bill Venables Bill.Venables@gmail.com
0 errors | 0 warnings | 0 notes
codyn (1.1.0)
Maintainer: Matthew B. Jones jones@nceas.ucsb.edu Bug reports: https://github.com/laurenmh/codyn/issues
0 errors | 0 warnings | 0 notes
coefplot (1.2.4)
Maintainer: Jared P. Lander packages@jaredlander.com
0 errors | 0 warnings | 0 notes
cofeatureR (1.0.1)
Maintainer: Fong Chun Chan fongchunchan@gmail.com Bug reports: https://github.com/tinyheero/cofeatureR/issues
0 errors | 0 warnings | 0 notes
CollapsABEL (0.10.8)
Maintainer: Kaiyin Zhong kindlychung@gmail.com Bug reports: https://bitbucket.org/kindlychung/collapsabel2/issues
1 error | 0 warnings | 0 notes
checking whether package ‘CollapsABEL’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/CollapsABEL.Rcheck/00install.out’ for details.
coloc (2.3-1)
Maintainer: Chris Wallace chris.wallace@cimr.cam.ac.uk Bug reports: https://github.com/chr1swallace/coloc/issues
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: colorspace
Loading required package: MASS
Loading required package: BMA
Loading required package: survival
Loading required package: leaps
Loading required package: robustbase
Attaching package: ‘robustbase’
The following object is masked from ‘package:survival’:
heart
Loading required package: inline
Loading required package: rrcov
Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
Error: processing vignette 'vignette.Rnw' failed with diagnostics:
chunk 7
Error in library(snpStats) : there is no package called ‘snpStats’
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘snpStats’
checking R code for possible problems ... NOTE
approx.bf.p: no visible global function definition for ‘qnorm’
coeff.plot: no visible global function definition for ‘polygon’
coeff.plot: no visible global function definition for ‘abline’
coeff.plot: no visible global function definition for ‘arrows’
coeff.plot: no visible global function definition for ‘points’
coeff.plot: no visible global function definition for ‘segments’
coloc.abf.snpStats: no visible global function definition for
‘single.snp.tests’
coloc.abf.snpStats: no visible global function definition for
... 43 lines ...
cor glm impute.snps integrate lm object optimize pchisq pf points
polygon prcomp qnorm segments single.snp.tests snp.imputation var
vcov
Consider adding
importFrom("graphics", "abline", "arrows", "axis", "box", "points",
"polygon", "segments")
importFrom("stats", "as.formula", "coef", "coefficients", "cor", "glm",
"integrate", "lm", "optimize", "pchisq", "pf", "prcomp",
"qnorm", "var", "vcov")
importFrom("utils", "combn")
to your NAMESPACE file.
colormap (0.1.3)
Maintainer: Bhaskar Karambelkar bhaskarvk@gmail.com Bug reports: https://github.com/bhaskarvk/colormap/issues
0 errors | 0 warnings | 0 notes
colorplaner (0.1.3)
Maintainer: William Murphy william.murphy.rd@gmail.com Bug reports: https://github.com/wmurphyrd/colorplaner/issues
0 errors | 0 warnings | 0 notes
CommT (0.1.1)
Maintainer: Michael Gruenstaeudl mi.gruenstaeudl@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CommT.anova: no visible global function definition for ‘aov’
CommT.legendpos: no visible global function definition for ‘quantile’
CommT.plotcolors: no visible global function definition for ‘hcl’
Undefined global functions or variables:
aov hcl quantile
Consider adding
importFrom("grDevices", "hcl")
importFrom("stats", "aov", "quantile")
to your NAMESPACE file.
complmrob (0.6.1)
Maintainer: David Kepplinger david.kepplinger@gmail.com
0 errors | 0 warnings | 0 notes
confidence (1.1-0)
Maintainer: Dennis J. J. Walvoort dennis.Walvoort@wur.nl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
conf: no visible global function definition for ‘read.csv’
conf: no visible global function definition for ‘write.csv’
mya.conf_input : <anonymous>: no visible global function definition for
‘sd’
mya.conf_input : <anonymous>: no visible global function definition for
‘qt’
mya.conf_input : <anonymous>: no visible global function definition for
‘pt’
plot.mya: no visible global function definition for ‘dt’
plot.mya: no visible global function definition for ‘rgb’
write_html.conf_input: no visible global function definition for
‘browseURL’
Undefined global functions or variables:
browseURL dt pt qt read.csv rgb sd write.csv
Consider adding
importFrom("grDevices", "rgb")
importFrom("stats", "dt", "pt", "qt", "sd")
importFrom("utils", "browseURL", "read.csv", "write.csv")
to your NAMESPACE file.
conformal (0.2)
Maintainer: Isidro Cortes isidrolauscher@gmail.com
0 errors | 0 warnings | 0 notes
Conigrave (0.1.0)
Maintainer: James Conigrave james.conigrave@gmail.com
0 errors | 0 warnings | 0 notes
contoureR (1.0.5)
Maintainer: Nicholas Hamilton n.hamilton@unsw.edu.au
0 errors | 0 warnings | 0 notes
cooccur (1.3)
Maintainer: Daniel M. Griffith griffith.dan@gmail.com
0 errors | 0 warnings | 0 notes
CopulaDTA (0.0.4)
Maintainer: Victoria N Nyaga victoria.nyaga@outlook.com
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 291-292 (CopulaDTA_Vignette.Rmd)
Error: processing vignette 'CopulaDTA_Vignette.Rmd' failed with diagnostics:
index out of bounds ('unit' subsetting)
Execution halted
corkscrew (1.1)
Maintainer: Santhosh Sasanapuri santhosh458@gmail.com
0 errors | 0 warnings | 0 notes
corrr (0.2.1)
Maintainer: Simon Jackson drsimonjackson@gmail.com Bug reports: https://github.com/drsimonj/corrr/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘corrr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: network_plot
> ### Title: Network plot of a correlation data frame
> ### Aliases: network_plot
>
> ### ** Examples
>
> x <- correlate(mtcars)
> network_plot(x)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
cosinor (1.1)
Maintainer: Michael Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cosinor.lm: no visible binding for global variable ‘na.omit’
cosinor.lm: no visible global function definition for ‘terms’
cosinor.lm: no visible global function definition for ‘as.formula’
cosinor.lm: no visible global function definition for ‘lm’
cosinor_analyzer: no visible binding for global variable ‘vitamind’
cosinor_analyzer : <anonymous>: no visible global function definition
for ‘as.formula’
ggplot.cosinor.lm: no visible global function definition for ‘predict’
predict.cosinor.lm: no visible global function definition for ‘fitted’
... 7 lines ...
summary.cosinor.lm: no visible global function definition for ‘pnorm’
test_cosinor: no visible global function definition for ‘pchisq’
test_cosinor: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
as.formula fitted lm na.omit pchisq pnorm predict qnorm rbinom rnorm
runif terms vcov vitamind
Consider adding
importFrom("stats", "as.formula", "fitted", "lm", "na.omit", "pchisq",
"pnorm", "predict", "qnorm", "rbinom", "rnorm", "runif",
"terms", "vcov")
to your NAMESPACE file.
CosmoPhotoz (0.1)
Maintainer: Rafael S. de Souza rafael.2706@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CosmoPhotoZestimator: no visible global function definition for
‘predict’
computeCombPCA: no visible global function definition for ‘prcomp’
computeDiagPhotoZ: no visible global function definition for ‘sd’
computeDiagPhotoZ: no visible global function definition for ‘median’
computeDiagPhotoZ: no visible global function definition for ‘mad’
glmPredictPhotoZ: no visible global function definition for ‘predict’
glmTrainPhotoZ: no visible global function definition for ‘glm’
glmTrainPhotoZ: no visible global function definition for ‘Gamma’
glmTrainPhotoZ: no visible global function definition for
‘inverse.gaussian’
plotDiagPhotoZ: no visible global function definition for ‘median’
plotDiagPhotoZ: no visible global function definition for ‘mad’
Undefined global functions or variables:
Gamma glm inverse.gaussian mad median prcomp predict sd
Consider adding
importFrom("stats", "Gamma", "glm", "inverse.gaussian", "mad",
"median", "prcomp", "predict", "sd")
to your NAMESPACE file.
countytimezones (1.0.0)
Maintainer: Brooke Anderson brooke.anderson@colostate.edu Bug reports: https://github.com/geanders/countytimezones/issues
0 errors | 0 warnings | 0 notes
countyweather (0.1.0)
Maintainer: Rachel Severson rachel.severson@colostate.edu
0 errors | 0 warnings | 0 notes
covmat (1.0)
Maintainer: Rohit Arora emailrohitarora@gmail.com
0 errors | 0 warnings | 0 notes
cowplot (0.7.0)
Maintainer: Claus O. Wilke wilke@austin.utexas.edu Bug reports: https://github.com/wilkelab/cowplot/issues
0 errors | 0 warnings | 0 notes
cplm (0.7-4)
Maintainer: Yanwei (Wayne) Zhang actuary_zhang@hotmail.com
0 errors | 0 warnings | 0 notes
crawl (2.0.1)
Maintainer: Devin S. Johnson devin.johnson@noaa.gov
0 errors | 0 warnings | 0 notes
cricketr (0.0.13)
Maintainer: Tinniam V Ganesh tvganesh.85@gmail.com Bug reports: https://github.com/tvganesh/cricketr/issues
0 errors | 0 warnings | 0 notes
crmPack (0.2.0)
Maintainer: Daniel Sabanes Bove sabanesd@roche.com
1 error | 0 warnings | 0 notes
checking whether package ‘crmPack’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/crmPack.Rcheck/00install.out’ for details.
Crossover (0.1-16)
Maintainer: Kornelius Rohmeyer rohmeyer@small-projects.de Bug reports: https://github.com/kornl/Crossover/issues
1 error | 0 warnings | 0 notes
checking whether package ‘Crossover’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Crossover.Rcheck/00install.out’ for details.
CRTgeeDR (1.2)
Maintainer: Melanie Prague mprague@hsph.harvard.edu
0 errors | 0 warnings | 0 notes
csp (0.1.0)
Maintainer: Eric Persson expersso5@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 11.0Mb
sub-directories of 1Mb or more:
data 10.9Mb
cutoffR (1.0)
Maintainer: Lingbing Feng fenglb88@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Cut: no visible global function definition for ‘cor’
MissSimulation: no visible global function definition for ‘rbinom’
cutoff: no visible global function definition for ‘cor’
Undefined global functions or variables:
cor rbinom
Consider adding
importFrom("stats", "cor", "rbinom")
to your NAMESPACE file.
cvxclustr (1.1.1)
Maintainer: Eric C. Chi ecchi1105@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
create_clustering_problem: no visible global function definition for
‘rnorm’
Undefined global functions or variables:
rnorm
Consider adding
importFrom("stats", "rnorm")
to your NAMESPACE file.
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
src/Makevars
Some ‘make’ programs ignore lines not ending in LF.
Cyclops (1.2.2)
Maintainer: Marc A. Suchard msuchard@ucla.edu Bug reports: https://github.com/ohdsi/cyclops/issues
0 errors | 0 warnings | 0 notes
cystiSim (0.1.0)
Maintainer: Brecht Devleesschauwer brechtdv@gmail.com Bug reports: https://github.com/brechtdv/cystiSim/issues
0 errors | 0 warnings | 0 notes
dae (2.7-20)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
0 errors | 0 warnings | 0 notes
dams (0.2)
Maintainer: Joseph Stachelek stachel2@msu.edu Bug reports: http://www.github.com/jsta/dams/issues
0 errors | 0 warnings | 0 notes
darch (0.12.0)
Maintainer: Martin Drees mdrees@stud.fh-dortmund.de Bug reports: https://github.com/maddin79/darch/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘gputools’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘gputools’
darksky (1.0.0)
Maintainer: Bob Rudis bob@rud.is Bug reports: https://github.com/hrbrmstr/darksky/issues
0 errors | 0 warnings | 0 notes
data.table (1.9.6)
Maintainer: Matt Dowle mattjdowle@gmail.com Bug reports: https://github.com/Rdatatable/data.table/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/tests.R’ failed.
Last 13 lines of output:
Test 167.2 ran without errors but failed check that x equals y:
> x = names(print(ggplot(DT) + geom_hex(aes(b, f)) + facet_wrap(~grp)))
[1] "data" "layout" "plot"
> y = c("data", "panel", "plot")
[1] "data" "panel" "plot"
Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
Tests 1441-1444 not run. If required install the 'fr_FR.utf8' locale.
Error in eval(expr, envir, enclos) :
2 errors out of 4428 (lastID=1557.4, endian=little, sizeof(long double)==16) in inst/tests/tests.Rraw on Mon Nov 7 11:51:45 2016. Search tests.Rraw for test numbers: 167, 167.2.
Calls: test.data.table -> sys.source -> eval -> eval
Execution halted
DataExplorer (0.2.6)
Maintainer: Boxuan Cui boxuancui@gmail.com Bug reports: https://github.com/boxuancui/DataExplorer/issues
0 errors | 0 warnings | 0 notes
dcmr (1.0)
Maintainer: Diane Losardo dlosardo@amplify.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
DrawAlphas: no visible global function definition for ‘rmultinom’
DrawClasses: no visible global function definition for ‘runif’
GetGammaNames: no visible global function definition for ‘combn’
GetLambdaNamesForItem: no visible global function definition for
‘combn’
SampleParameterEstimates: no visible global function definition for
‘rnorm’
plot,attribute.class-missing: no visible binding for global variable
‘attr.number’
... 6 lines ...
variable ‘mean.attr.profile’
summary,attribute.class: no visible binding for global variable ‘value’
summary,attribute.profile.class: no visible binding for global variable
‘max.class’
Undefined global functions or variables:
attr.number attr.profile.number combn max.class mean.attr
mean.attr.profile rmultinom rnorm runif value
Consider adding
importFrom("stats", "rmultinom", "rnorm", "runif")
importFrom("utils", "combn")
to your NAMESPACE file.
ddpcr (1.5)
Maintainer: Dean Attali daattali@gmail.com Bug reports: https://github.com/daattali/ddpcr/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
)
Parsed with column specification:
cols(
`Assay1 Amplitude` = col_double(),
`Assay2 Amplitude` = col_double(),
Cluster = col_integer()
)
... 8 lines ...
cols(
`Assay1 Amplitude` = col_double(),
`Assay2 Amplitude` = col_double(),
Cluster = col_integer()
)
DONE (0 seconds)
Initializing plate of type `custom_thresholds`... DONE (0 seconds)
Quitting from lines 442-443 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Aesthetics must be either length 1 or the same as the data (4): x, y, size, hjust, vjust, fontface
Execution halted
Deducer (0.7-9)
Maintainer: Ian Fellows ian@fellstat.com
1 error | 0 warnings | 0 notes
checking whether package ‘Deducer’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Deducer.Rcheck/00install.out’ for details.
DeLorean (1.2.4)
Maintainer: John Reid john.reid@mrc-bsu.cam.ac.uk
0 errors | 0 warnings | 0 notes
demi (1.1.2)
Maintainer: Sten Ilmjarv sten.ilmjarv@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘affxparser’ ‘affy’ ‘oligo’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
dendextend (1.3.0)
Maintainer: Tal Galili tal.galili@gmail.com Bug reports: https://github.com/talgalili/dendextend/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages which this enhances but not available for checking:
‘labeltodendro’ ‘dendroextras’
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘dendroextras’, ‘moduleColor’
DengueRT (1.0.1)
Maintainer: Carlos Sebrango sebrango@uniss.edu.cu
0 errors | 0 warnings | 0 notes
DepthProc (1.0.7)
Maintainer: Zygmunt Zawadzki zawadzkizygmunt@gmail.com
0 errors | 0 warnings | 0 notes
DescribeDisplay (0.2.5)
Maintainer: Di Cook dicook@monash.edu Bug reports: https://github.com/ggobi/DescribeDisplay/issues
0 errors | 0 warnings | 0 notes
detzrcr (0.1.2)
Maintainer: Magnus Kristoffersen magnus.kristoffersen@geo.uio.no
0 errors | 0 warnings | 0 notes
dfexplore (0.2.1)
Maintainer: Joris Muller joris.muller@etu.unistra.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
simulate_dataframe : generate_dumb_answer: no visible global function
definition for ‘rbinom’
simulate_dataframe : generate_dumb_answer: no visible global function
definition for ‘rnorm’
simulate_dataframe : generate_initial: no visible global function
definition for ‘rbinom’
simulate_dataframe: no visible binding for global variable ‘randu’
simulate_dataframe: no visible global function definition for ‘rbinom’
simulate_dataframe: no visible global function definition for ‘rnorm’
simulate_dataframe: no visible global function definition for ‘rpois’
simulate_dataframe : add_NAs: no visible global function definition for
‘rbinom’
Undefined global functions or variables:
randu rbinom rnorm rpois
Consider adding
importFrom("datasets", "randu")
importFrom("stats", "rbinom", "rnorm", "rpois")
to your NAMESPACE file.
DFIT (1.0-2)
Maintainer: Victor H. Cervantes vhcervantesb@unal.edu.co
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Ase1pl: no visible global function definition for ‘integrate’
Ase2pl: no visible global function definition for ‘integrate’
Ase3pl: no visible global function definition for ‘integrate’
Ase3pl: no visible global function definition for ‘qnorm’
Calculate1plProb: no visible global function definition for ‘plogis’
Calculate2plProb: no visible global function definition for ‘plogis’
Calculate3plProb: no visible global function definition for ‘plogis’
CalculateGrmExp: no visible global function definition for ‘plogis’
Cdif: no visible global function definition for ‘integrate’
... 6 lines ...
PlotNcdif: no visible global function definition for ‘density’
ProductProbabilities: no visible global function definition for
‘plogis’
SignedArea: no visible global function definition for ‘integrate’
UnsignedArea: no visible global function definition for ‘integrate’
Undefined global functions or variables:
density integrate plogis qnorm quantile
Consider adding
importFrom("stats", "density", "integrate", "plogis", "qnorm",
"quantile")
to your NAMESPACE file.
dfpk (1.0)
Maintainer: Artemis Toumazi artemis.toumazi@inserm.fr Bug reports: http://github.com/artemis-toumazi/dfpk/issues
0 errors | 0 warnings | 0 notes
dggridR (0.1.11)
Maintainer: Richard Barnes rbarnes@umn.edu Bug reports: https://github.com/r-barnes/dggridR/
0 errors | 0 warnings | 0 notes
diagis (0.1.0)
Maintainer: Jouni Helske jouni.helske@jyu.fi
0 errors | 0 warnings | 0 notes
DiallelAnalysisR (0.1.1)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
0 errors | 0 warnings | 0 notes
dielectric (0.2.3)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘methods’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
L2eV: no visible binding for global variable ‘constants’
L2w: no visible binding for global variable ‘constants’
dielectric: no visible global function definition for ‘new’
dielectric2plot: no visible global function definition for ‘reshape’
eV2L: no visible binding for global variable ‘constants’
t2eV: no visible binding for global variable ‘constants’
Undefined global functions or variables:
constants new reshape
Consider adding
importFrom("methods", "new")
importFrom("stats", "reshape")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
diffeR (0.0-4)
Maintainer: Al� Santacruz amsantac@unal.edu.co
0 errors | 0 warnings | 0 notes
difNLR (0.1.0)
Maintainer: Adela Drabinova adela.drabinova@gmail.com
0 errors | 0 warnings | 0 notes
directlabels (2015.12.16)
Maintainer: Toby Dylan Hocking tdhock5@gmail.com
0 errors | 0 warnings | 0 notes
disclapmix (1.6.2)
Maintainer: Mikkel Meyer Andersen mikl@math.aau.dk
0 errors | 0 warnings | 0 notes
diveRsity (1.9.89)
Maintainer: Kevin Keenan kkeenan02@qub.ac.uk
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
DiversityOccupancy (1.0.5)
Maintainer: Derek Corcoran derek.corcoran.barrios@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘DiversityOccupancy’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/DiversityOccupancy.Rcheck/00install.out’ for details.
dlstats (0.0.9)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com Bug reports: https://github.com/GuangchuangYu/dlstats/issues
0 errors | 0 warnings | 0 notes
dMod (0.3.2)
Maintainer: Daniel Kaschek daniel.kaschek@physik.uni-freiburg.de
0 errors | 0 warnings | 0 notes
doBy (4.5-15)
Maintainer: S�ren H�jsgaard sorenh@math.aau.dk
0 errors | 0 warnings | 0 notes
DoTC (0.2)
Maintainer: Holger Sennhenn-Reulen hsennhenn-reulen@dpz.eu
0 errors | 0 warnings | 0 notes
dotwhisker (0.2.2)
Maintainer: Yue Hu yue-hu-1@uiowa.edu Bug reports: https://github.com/fsolt/dotwhisker/issues
0 errors | 0 warnings | 0 notes
dpcR (0.3)
Maintainer: Michal Burdukiewicz michalburdukiewicz@gmail.com Bug reports: https://github.com/michbur/dpcR/issues
0 errors | 0 warnings | 0 notes
dplyr (0.5.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/dplyr/issues
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Missing or unexported object: ‘RSQLite::rsqliteVersion’
DrBats (0.1.4)
Maintainer: Gabrielle Weinrott gabrielle.weinrott@supagro.inra.fr
0 errors | 0 warnings | 0 notes
drLumi (0.1.2)
Maintainer: Hector Sanz hector.sanz@isglobal.org
0 errors | 0 warnings | 0 notes
dslice (1.1.5)
Maintainer: Chao Ye yechao1009@gmail.com
0 errors | 0 warnings | 0 notes
dsm (2.2.13)
Maintainer: Laura Marshall lhm@st-andrews.ac.uk Bug reports: https://github.com/DistanceDevelopment/dsm/issues
0 errors | 0 warnings | 0 notes
DstarM (0.1.0)
Maintainer: Don van den Bergh donvdbergh@hotmail.com
0 errors | 0 warnings | 0 notes
DTR (1.7)
Maintainer: Xinyu Tang xtang@uams.edu
0 errors | 0 warnings | 0 notes
DTRlearn (1.2)
Maintainer: Ying Liu yl2802@cumc.columbia.edu
0 errors | 0 warnings | 0 notes
dtwclust (2.3.0)
Maintainer: Alexis Sarda alexis.sarda@gmail.com Bug reports: https://github.com/asardaes/dtwclust/issues
0 errors | 0 warnings | 0 notes
dtwSat (0.2.1)
Maintainer: Victor Maus vwmaus1@gmail.com
0 errors | 0 warnings | 0 notes
DVHmetrics (0.3.6)
Maintainer: Daniel Wollschlaeger wollschlaeger@uni-mainz.de
0 errors | 0 warnings | 0 notes
DynNom (3.0.1)
Maintainer: Amirhossein Jalali a.jalali2@nuigalway.ie
1 error | 0 warnings | 0 notes
checking whether package ‘DynNom’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/DynNom.Rcheck/00install.out’ for details.
dynr (0.1.7)
Maintainer: Lu Ou lzo114@psu.edu
1 error | 0 warnings | 0 notes
checking whether package ‘dynr’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/dynr.Rcheck/00install.out’ for details.
dynsim (1.2.1)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com Bug reports: https://github.com/christophergandrud/dynsim/issues
0 errors | 0 warnings | 0 notes
dynsurv (0.3-3)
Maintainer: Wenjie Wang wenjie.2.wang@uconn.edu Bug reports: https://github.com/wenjie2wang/dynsurv/issues
0 errors | 0 warnings | 0 notes
earlywarnings (1.0.59)
Maintainer: Vasilis Dakos vasilis.dakos@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
PlotPotential: no visible global function definition for ‘aes’
PlotPotential: no visible global function definition for ‘geom_tile’
PlotPotential: no visible global function definition for
‘scale_fill_gradient’
PlotPotential: no visible global function definition for ‘stat_contour’
PlotPotential: no visible global function definition for ‘xlab’
PlotPotential: no visible global function definition for ‘ylab’
PlotPotential: no visible global function definition for ‘labs’
bdstest_ews: no visible global function definition for ‘dev.new’
... 50 lines ...
surrogates_ews: no visible global function definition for ‘mtext’
Undefined global functions or variables:
abline aes contour dev.new geom_tile grid hist labs layout legend
lines mtext par plot points rainbow scale_fill_gradient stat_contour
text title topo.colors xlab ylab
Consider adding
importFrom("grDevices", "dev.new", "rainbow", "topo.colors")
importFrom("graphics", "abline", "contour", "grid", "hist", "layout",
"legend", "lines", "mtext", "par", "plot", "points", "text",
"title")
to your NAMESPACE file.
earthtones (0.1.0)
Maintainer: Will Cornwell wcornwell@gmail.com
0 errors | 0 warnings | 0 notes
EasyHTMLReport (0.1.1)
Maintainer: Yohei Sato yohei0511@gmail.com
0 errors | 0 warnings | 3 notes
checking top-level files ... NOTE
Non-standard files/directories found at top level:
‘easy_html_report_tmp_1376284934.59207.tsv’
‘easy_html_report_tmp_1376284935.5951.tsv’
‘easy_html_report_tmp_1376284936.59848.tsv’
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘base64enc’ ‘knitr’ ‘markdown’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.file_attachment: no visible global function definition for
‘base64encode’
.plot_attachment: no visible global function definition for ‘dev.off’
.update_list: no visible global function definition for ‘modifyList’
easyHtmlReport: no visible global function definition for ‘knit’
easyHtmlReport: no visible global function definition for
‘markdownToHTML’
mime_part.data.frame: no visible global function definition for
‘write.table’
mime_part.ggplot: no visible binding for global variable ‘pdf’
mime_part.matrix: no visible global function definition for
‘write.table’
mime_part.trellis: no visible binding for global variable ‘pdf’
simpleHtmlReport : <anonymous>: no visible global function definition
for ‘write.table’
Undefined global functions or variables:
base64encode dev.off knit markdownToHTML modifyList pdf write.table
Consider adding
importFrom("grDevices", "dev.off", "pdf")
importFrom("utils", "modifyList", "write.table")
to your NAMESPACE file.
ecb (0.2)
Maintainer: Eric Persson expersso5@gmail.com
1 error | 1 warning | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
5: check_status(req)
6: stop("HTTP failure: ", req$status_code, "\n", httr::content(req, "text"))
testthat results ================================================================
OK: 2 SKIPPED: 0 FAILED: 5
1. Error: get_dimensions returns a list of data frames (@tests.R#16)
2. Failure: malformed series key returns 404 error (@tests.R#25)
3. Failure: malformed series key returns 404 error (@tests.R#26)
4. Failure: malformed series key returns 404 error (@tests.R#27)
5. Error: get_description returns a character vector (@tests.R#32)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 114-116 (ecb_sdw.Rmd)
Error: processing vignette 'ecb_sdw.Rmd' failed with diagnostics:
HTTP failure: 500
<HTML><HEAD>
<TITLE>Internal Server Error</TITLE>
</HEAD><BODY>
<H1>Internal Server Error - Read</H1>
The server encountered an internal error or misconfiguration and was unable to
complete your request.<P>
Reference #3.f0fd717.1478542055.756990
</BODY></HTML>
Execution halted
ecoengine (1.10.0)
Maintainer: Karthik Ram karthik.ram@gmail.com Bug reports: https://github.com/ropensci/ecoengine/issues
0 errors | 0 warnings | 0 notes
EcoGenetics (1.2.0-3)
Maintainer: Leandro Roser learoser@gmail.com
0 errors | 0 warnings | 0 notes
ecr (1.0.1)
Maintainer: Jakob Bossek j.bossek@gmail.com Bug reports: https://github.com/jakobbossek/ecr/issues
0 errors | 0 warnings | 0 notes
edarf (1.0.0)
Maintainer: Zachary M. Jones zmj@zmjones.com Bug reports: https://github.com/zmjones/edarf
0 errors | 0 warnings | 0 notes
edeaR (0.4.4)
Maintainer: Gert Janssenswillen gert.janssenswillen@uhasselt.be
0 errors | 0 warnings | 0 notes
edfReader (1.1.1)
Maintainer: Jan Vis jan@visconsultancy.eu
0 errors | 0 warnings | 0 notes
edgar (1.0.6)
Maintainer: Gunratan Lonare lonare.gunratan@gmail.com
0 errors | 0 warnings | 0 notes
eechidna (0.1)
Maintainer: Ben Marwick benmarwick@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘eechidna-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hexDat
> ### Title: Electorate hexagon data in a tidy form
> ### Aliases: hexDat
> ### Keywords: datasets
>
... 18 lines ...
layout
> p <- ggplot(hexDat, aes(xcent, ycent, text = Electorate)) +
+ geom_hex(stat = "identity") +
+ lims(x=c(-80, 8), y=c(-40, 50))
> ggplotly(p, tooltip = "text")
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
EEM (1.1.1)
Maintainer: Vipavee Trivittayasil vipavee.tri@gmail.com
0 errors | 0 warnings | 0 notes
eemR (0.1.4)
Maintainer: Philippe Massicotte pm@bios.au.dk Bug reports: https://github.com/PMassicotte/eemR/issues
0 errors | 0 warnings | 0 notes
eeptools (1.0.0)
Maintainer: Jared E. Knowles jknowles@gmail.com
0 errors | 0 warnings | 0 notes
EFDR (0.1.1)
Maintainer: Andrew Zammit-Mangion andrewzm@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.gdf : find_loss: no visible global function definition for ‘rnorm’
.p.values : <anonymous>: no visible global function definition for
‘pnorm’
.relist.dwt: no visible global function definition for ‘relist’
.relist.dwt: no visible global function definition for ‘as’
.std.wav.coeff : <anonymous>: no visible global function definition for
‘mad’
regrid: no visible global function definition for ‘predict’
regrid: no visible global function definition for ‘var’
regrid: no visible global function definition for ‘medpolish’
Undefined global functions or variables:
as mad medpolish pnorm predict relist rnorm var
Consider adding
importFrom("methods", "as")
importFrom("stats", "mad", "medpolish", "pnorm", "predict", "rnorm",
"var")
importFrom("utils", "relist")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
EffectLiteR (0.4-2)
Maintainer: Axel Mayer amayer2010@gmail.com
0 errors | 0 warnings | 0 notes
ega (1.0.1)
Maintainer: Daniel Schmolze ega@schmolze.com
0 errors | 0 warnings | 0 notes
egcm (1.0.8)
Maintainer: Matthew Clegg matthewcleggphd@gmail.com
0 errors | 0 warnings | 0 notes
eiCompare (1.7)
Maintainer: Loren Collingwood loren.collingwood@ucr.edu
0 errors | 0 warnings | 0 notes
emil (2.2.6)
Maintainer: Christofer Backlin emil@christofer.backlin.se Bug reports: https://github.com/Molmed/emil/issues
0 errors | 0 warnings | 0 notes
emojifont (0.3.4)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com Bug reports: https://github.com/GuangchuangYu/emojifont/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 119-144 (emojifont.Rmd)
Error: processing vignette 'emojifont.Rmd' failed with diagnostics:
there is no package called 'ggtree'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘ggtree’
EmpiricalCalibration (1.2.0)
Maintainer: Martijn Schuemie schuemie@ohdsi.org Bug reports: https://github.com/OHDSI/EmpiricalCalibration/issues
0 errors | 0 warnings | 0 notes
emuR (0.1.9)
Maintainer: Raphael Winkelmann raphael@phonetik.uni-muenchen.de Bug reports: https://github.com/IPS-LMU/emuR/issues
0 errors | 0 warnings | 0 notes
enigma (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropengov/enigma/issues
0 errors | 0 warnings | 0 notes
enpls (5.0)
Maintainer: Nan Xiao me@nanx.me Bug reports: https://github.com/road2stat/enpls/issues
0 errors | 0 warnings | 0 notes
EpiDynamics (0.3.0)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
episensr (0.7.2)
Maintainer: Denis Haine denis.haine@gmail.com Bug reports: https://github.com/dhaine/episensr/issues
0 errors | 0 warnings | 0 notes
episheet (0.2.0)
Maintainer: James Black james@epijim.uk Bug reports: https://github.com/epijim/episheet/issues
0 errors | 0 warnings | 0 notes
ESGtoolkit (0.1)
Maintainer: Thierry Moudiki thierry.moudiki@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
bands.add: no visible global function definition for ‘polygon’
bands.add: no visible global function definition for ‘lines’
bands.plot: no visible global function definition for ‘plot’
bands.plot: no visible global function definition for ‘polygon’
bands.plot: no visible global function definition for ‘lines’
bands.plot: no visible global function definition for ‘abline’
esgcortest: no visible global function definition for ‘deltat’
esgcortest: no visible global function definition for ‘ts’
esgcortest : <anonymous>: no visible global function definition for
... 66 lines ...
element_blank end geom_density geom_point is.ts lines matplot par
plot points polygon pt qnorm qt quantile scale_color_manual
scale_fill_manual sd start t.test theme time ts tsp window xlab ylab
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("graphics", "abline", "lines", "matplot", "par", "plot",
"points", "polygon")
importFrom("stats", "cor", "cor.test", "deltat", "end", "is.ts", "pt",
"qnorm", "qt", "quantile", "sd", "start", "t.test", "time",
"ts", "tsp", "window")
to your NAMESPACE file.
etl (0.3.3.1)
Maintainer: Ben Baumer ben.baumer@gmail.com Bug reports: https://github.com/beanumber/etl/issues
0 errors | 0 warnings | 0 notes
etm (0.6-2)
Maintainer: Arthur Allignol arthur.allignol@uni-ulm.de
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
avec.cov: no visible global function definition for ‘qnorm’
closPseudo: no visible global function definition for ‘terms’
etmCIF: no visible global function definition for ‘model.extract’
lines.etm: no visible global function definition for ‘lines’
phiPseudo: no visible global function definition for ‘terms’
plot.clos.etm: no visible global function definition for ‘par’
plot.clos.etm: no visible global function definition for ‘split.screen’
plot.clos.etm: no visible global function definition for ‘screen’
plot.clos.etm: no visible global function definition for ‘plot’
... 10 lines ...
print.summary.etm: no visible global function definition for ‘quantile’
print.summary.etmCIF: no visible global function definition for
‘quantile’
Undefined global functions or variables:
axis box close.screen lines model.extract par plot qnorm quantile
screen segments split.screen terms
Consider adding
importFrom("graphics", "axis", "box", "close.screen", "lines", "par",
"plot", "screen", "segments", "split.screen")
importFrom("stats", "model.extract", "qnorm", "quantile", "terms")
to your NAMESPACE file.
eurostat (2.2.1)
Maintainer: Lahti Leo louhos@googlegroups.com Bug reports: https://github.com/ropengov/eurostat/issues
0 errors | 0 warnings | 0 notes
evaluate (0.10)
Maintainer: Yihui Xie xie@yihui.name Bug reports: https://github.com/hadley/evaluate/issues
0 errors | 0 warnings | 0 notes
evolqg (0.2-4)
Maintainer: Diogo Melo diogro@usp.br Bug reports: https://github.com/lem-usp/evolqg/issues
0 errors | 0 warnings | 0 notes
Evomorph (0.9)
Maintainer: Juan Manuel Cabrera juanmanuelcabrera1@gmail.com
0 errors | 0 warnings | 0 notes
explor (0.2.1)
Maintainer: Julien Barnier julien.barnier@ens-lyon.fr Bug reports: https://github.com/juba/explor/issues
0 errors | 0 warnings | 0 notes
exploreR (0.1)
Maintainer: Michael Coates azhain@gmail.com
0 errors | 0 warnings | 0 notes
exreport (0.4.1)
Maintainer: Jacinto Arias jacinto.arias@uclm.es
0 errors | 0 warnings | 0 notes
ExtDist (0.6-3)
Maintainer: A. Jonathan R. Godfrey a.j.godfrey@massey.ac.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
DistSelCriteria: no visible binding for global variable ‘getS3method’
bestDist: no visible global function definition for ‘getS3method’
compareDist: no visible global function definition for ‘hist’
compareDist: no visible global function definition for ‘curve’
dBeta: no visible global function definition for ‘dbeta’
dBeta_ab: no visible global function definition for ‘dbeta’
dJohnsonSU: no visible global function definition for ‘dnorm’
dLogistic: no visible global function definition for ‘dlogis’
dNormal: no visible global function definition for ‘dnorm’
... 46 lines ...
abline capture.output coef cov2cor curve dbeta dlogis dnorm dunif
getS3method hist median par pbeta plogis plot pnorm punif qbeta
qlogis qnorm qunif rbeta rlogis rnorm runif sd uniroot var
Consider adding
importFrom("graphics", "abline", "curve", "hist", "par", "plot")
importFrom("stats", "coef", "cov2cor", "dbeta", "dlogis", "dnorm",
"dunif", "median", "pbeta", "plogis", "pnorm", "punif",
"qbeta", "qlogis", "qnorm", "qunif", "rbeta", "rlogis",
"rnorm", "runif", "sd", "uniroot", "var")
importFrom("utils", "capture.output", "getS3method")
to your NAMESPACE file.
extracat (1.7-4)
Maintainer: Alexander Pilhoefer alexander.pilhoefer@gmail.com
0 errors | 0 warnings | 0 notes
eyelinker (0.1)
Maintainer: Simon Barthelme simon.barthelme@gipsa-lab.fr
0 errors | 0 warnings | 0 notes
eyetrackingR (0.1.6)
Maintainer: Jacob Dink jacobwdink@gmail.com Bug reports: https://github.com/jwdink/eyetrackingR/issues
0 errors | 0 warnings | 0 notes
ez (4.4-0)
Maintainer: Michael A. Lawrence mike.lwrnc@gmail.com
0 errors | 0 warnings | 0 notes
ezsim (0.5.5)
Maintainer: TszKin Julian Chan ctszkin@gmail.com Bug reports: TszKin Julian Chan ctszkin@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
createFormula: no visible global function definition for ‘tail’
createFormula: no visible global function definition for ‘head’
createFormula: no visible global function definition for ‘as.formula’
ezsim: no visible global function definition for ‘runif’
plot.ezsim: no visible global function definition for ‘quantile’
plot.ezsim: no visible global function definition for ‘head’
plot.ezsim: no visible global function definition for ‘tail’
plot.ezsim: no visible global function definition for ‘plot’
plot.ezsim: no visible binding for global variable ‘dnorm’
... 8 lines ...
plot.summary.ezsim: no visible global function definition for ‘dev.off’
plot.summary.ezsim : <anonymous>: no visible global function definition
for ‘dev.new’
Undefined global functions or variables:
as.formula dev.new dev.off dnorm head pdf plot quantile runif tail
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "pdf")
importFrom("graphics", "plot")
importFrom("stats", "as.formula", "dnorm", "quantile", "runif")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
factoextra (1.0.3)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com Bug reports: https://github.com/kassambara/factoextra/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘factoextra-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fviz_ca
> ### Title: Visualize Correspondence Analysis
> ### Aliases: fviz_ca fviz_ca_biplot fviz_ca_col fviz_ca_row
>
> ### ** Examples
... 44 lines ...
>
> # Change gradient color
> # Use repel = TRUE to avoid overplotting (slow if many points)
> fviz_ca_row(res.ca, col.row = "cos2", repel = TRUE) +
+ scale_color_gradient2(low = "white", mid = "#2E9FDF",
+ high = "#FC4E07", midpoint = 0.5, space = "Lab")+
+ theme_minimal()
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
** found \donttest examples: check also with --run-donttest
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘NbClust’
FAOSTAT (2.0)
Maintainer: Filippo Gheri filippo.gheri@fao.org
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Aggregation : foo: no visible global function definition for
‘weighted.mean’
Aggregation: no visible global function definition for ‘txtProgressBar’
Aggregation: no visible global function definition for
‘setTxtProgressBar’
constructSYB: no visible global function definition for ‘str’
fillCountryCode: no visible global function definition for ‘na.omit’
getFAO: no visible global function definition for ‘read.csv’
getWDImetaData: no visible global function definition for ‘write.csv’
getWDItoSYB: no visible global function definition for ‘na.omit’
lsgr: no visible global function definition for ‘na.omit’
lsgr: no visible global function definition for ‘coef’
lsgr: no visible global function definition for ‘lm’
Undefined global functions or variables:
coef lm na.omit read.csv setTxtProgressBar str txtProgressBar
weighted.mean write.csv
Consider adding
importFrom("stats", "coef", "lm", "na.omit", "weighted.mean")
importFrom("utils", "read.csv", "setTxtProgressBar", "str",
"txtProgressBar", "write.csv")
to your NAMESPACE file.
fbroc (0.4.0)
Maintainer: Erik Peter jerikpeter@googlemail.com Bug reports: http://github.com/erikpeter/fbroc/issues
0 errors | 0 warnings | 0 notes
fermicatsR (1.4)
Maintainer: Pablo Saz Parkinson sazpark2@gmail.com
0 errors | 0 warnings | 0 notes
FField (0.1.0)
Maintainer: Grigori Kapoustin gregk@alphabetaworks.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘gridExtra’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
FFieldPtRepDemo: no visible global function definition for ‘ggplot’
FFieldPtRepDemo: no visible binding for global variable ‘mtcars’
FFieldPtRepDemo: no visible global function definition for ‘aes’
FFieldPtRepDemo: no visible binding for global variable ‘mpg’
FFieldPtRepDemo: no visible global function definition for ‘geom_point’
FFieldPtRepDemo: no visible global function definition for ‘geom_text’
FFieldPtRepDemo: no visible global function definition for ‘ggtitle’
FFieldPtRepDemo: no visible global function definition for
‘geom_segment’
FFieldPtRepDemo: no visible global function definition for
‘grid.arrange’
Undefined global functions or variables:
aes geom_point geom_segment geom_text ggplot ggtitle grid.arrange mpg
mtcars
Consider adding
importFrom("datasets", "mtcars")
to your NAMESPACE file.
Fgmutils (0.9.4)
Maintainer: Clayton Vieira Fraga Filho forestgrowthsoftware@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘Fgmutils’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/Fgmutils.Rcheck/00install.out’ for details.
fheatmap (1.0.1)
Maintainer: Sivasish Sindirisentisci@gmail.com
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘fheatmap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Column Annotations
> ### Title: Annotations of columns in "fheatmap_data"
> ### Aliases: ' annotation_col '
> ### Keywords: annotation_col
>
> ### ** Examples
>
> data(annotation_col)
> fheatmap(fheatmap_data,annotation_col=annotation_col)
Error in theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(), :
formal argument "plot.margin" matched by multiple actual arguments
Calls: fheatmap -> draw_tree -> theme_blank -> theme
Execution halted
checking R code for possible problems ... NOTE
theme_blank: possible error in theme(panel.grid.major =
element_blank(), panel.grid.minor = element_blank(), panel.background
= element_blank(), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid =
element_blank(), panel.border = element_blank(), plot.margin =
rep(unit(0, "null"), 4), panel.margin = unit(0, "null"), plot.margin
= rep(unit(0, "null"), 4), legend.position = "none"): formal argument
"plot.margin" matched by multiple actual arguments
FinCal (0.6.3)
Maintainer: Felix Yanhui Fan nolanfyh@gmail.com
0 errors | 0 warnings | 0 notes
findviews (0.1.2)
Maintainer: Thibault Sellam thibault.sellam@cwi.nl
0 errors | 0 warnings | 0 notes
fishmove (0.3-3)
Maintainer: Johannes Radinger jradinger@igb-berlin.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
fishmove : coefs: no visible global function definition for ‘coef’
fishmove : coefs: no visible global function definition for ‘pf’
fishmove: no visible global function definition for ‘lm’
fishmove: no visible global function definition for ‘predict.lm’
fishmove.estimate: no visible global function definition for ‘quantile’
fishmove.estimate : ddoublenorm: no visible global function definition
for ‘dnorm’
fishmove.query: no visible global function definition for ‘hasArg’
fishmove.query : f: no visible global function definition for ‘pnorm’
fishmove.query: no visible global function definition for ‘uniroot’
pdk: no visible global function definition for ‘hasArg’
pdk : eq: no visible global function definition for ‘dnorm’
Undefined global functions or variables:
coef dnorm hasArg lm pf pnorm predict.lm quantile uniroot
Consider adding
importFrom("methods", "hasArg")
importFrom("stats", "coef", "dnorm", "lm", "pf", "pnorm", "predict.lm",
"quantile", "uniroot")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
fitbitScraper (0.1.7)
Maintainer: Cory Nissen corynissen@gmail.com
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 29-40 (fitbitScraper-examples.Rmd)
Error: processing vignette 'fitbitScraper-examples.Rmd' failed with diagnostics:
Value for option cookie (10022) must be length-1 string
Execution halted
fitcoach (1.0)
Maintainer: Niraj Juneja njuneja@gmail.com
0 errors | 0 warnings | 0 notes
flowr (0.9.10)
Maintainer: Sahil Seth me@sahilseth.com Bug reports: https://github.com/sahilseth/flowr/issues
0 errors | 0 warnings | 0 notes
forcats (0.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/forcats/issues
0 errors | 0 warnings | 0 notes
forecast (7.3)
Maintainer: Rob Hyndman Rob.Hyndman@monash.edu Bug reports: https://github.com/robjhyndman/forecast/issues
0 errors | 0 warnings | 0 notes
forestmodel (0.4.0)
Maintainer: Nick Kennedy r@nick-kennedy.com
0 errors | 0 warnings | 0 notes
fractional (0.1.3)
Maintainer: Bill Venables bill.venables@gmail.com
0 errors | 0 warnings | 0 notes
frailtySurv (1.2.2.1)
Maintainer: John V. Monaco vincent@vmonaco.com Bug reports: https://github.com/vmonaco/frailtySurv/issues
0 errors | 0 warnings | 0 notes
FREddyPro (1.0)
Maintainer: Georgios Xenakis georgios.xenakis@forestry.gsi.gov.uk
0 errors | 0 warnings | 0 notes
freqparcoord (1.0.1)
Maintainer: Norm Matloff normmatloff@gmail.com
0 errors | 0 warnings | 0 notes
FreqProf (0.0.1)
Maintainer: Ronald E. Robertson rrobertson@aibrt.org Bug reports: https://github.com/AIBRT/FreqProf/issues
0 errors | 0 warnings | 0 notes
freqweights (1.0.2)
Maintainer: Emilio Torres-Manzanera torres@uniovi.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
.corfreq: no visible global function definition for ‘complete.cases’
.covfreq: no visible global function definition for ‘complete.cases’
.hclustvfreq: no visible global function definition for
‘complete.cases’
.quantilefreq : <anonymous>: no visible global function definition for
‘approx’
coef.biglmfreq: no visible global function definition for ‘coef’
predict.biglmfreq: no visible global function definition for ‘predict’
predict.lmfreq: no visible global function definition for ‘predict’
summary.lmfreq: no visible global function definition for ‘coef’
summary.lmfreq: no visible global function definition for ‘pt’
summary.lmfreq: no visible global function definition for ‘AIC’
update.biglmfreq: no visible global function definition for ‘update’
Undefined global functions or variables:
AIC approx coef complete.cases predict pt update
Consider adding
importFrom("stats", "AIC", "approx", "coef", "complete.cases",
"predict", "pt", "update")
to your NAMESPACE file.
frontiles (1.2)
Maintainer: Thibault Laurent thibault.laurent@univ-tlse1.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ROCscore: no visible global function definition for ‘par’
ROCscore: no visible global function definition for ‘axis’
ROCscore: no visible global function definition for ‘mtext’
ROCscore: no visible global function definition for ‘legend’
alphafrontier.2d: no visible global function definition for ‘par’
alphafrontier.2d: no visible global function definition for ‘polygon’
alphafrontier.2d: no visible global function definition for ‘lines’
alphafrontier.2d: no visible global function definition for ‘points’
alphafrontier.3d: no visible global function definition for ‘layout’
... 6 lines ...
ordermfrontier.2d: no visible global function definition for ‘polygon’
ordermfrontier.2d: no visible global function definition for ‘lines’
ordermfrontier.2d: no visible global function definition for ‘points’
ordermscore.boot: no visible global function definition for ‘sd’
Undefined global functions or variables:
axis barplot layout legend lines mtext na.omit par points polygon sd
Consider adding
importFrom("graphics", "axis", "barplot", "layout", "legend", "lines",
"mtext", "par", "points", "polygon")
importFrom("stats", "na.omit", "sd")
to your NAMESPACE file.
fSRM (0.6.4)
Maintainer: Felix Schönbrodt felix@nicebread.de
0 errors | 0 warnings | 0 notes
funModeling (1.4)
Maintainer: Pablo Casas pabloc@datascienceheroes.com Bug reports: https://github.com/pablo14/funModeling/issues
1 error | 0 warnings | 0 notes
checking whether package ‘funModeling’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/funModeling.Rcheck/00install.out’ for details.
funrar (1.0.1)
Maintainer: Matthias Grenié matthias.grenie@gmail.com Bug reports: https://github.com/Rekyt/funrar/issues
0 errors | 0 warnings | 0 notes
futureheatwaves (1.0.1)
Maintainer: Brooke Anderson brooke.anderson@colostate.edu
0 errors | 0 warnings | 0 notes
fuzzyforest (1.0.2)
Maintainer: Daniel Conn djconn17@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘fuzzyforest-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ff
> ### Title: Fits fuzzy forest algorithm.
> ### Aliases: ff
>
> ### ** Examples
... 9 lines ...
Attaching package: ‘fastcluster’
The following object is masked from ‘package:stats’:
hclust
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘GO.db’
Error: package or namespace load failed for ‘WGCNA’
Execution halted
** found \donttest examples: check also with --run-donttest
fuzzyjoin (0.1.2)
Maintainer: David Robinson drobinson@stackoverflow.com
0 errors | 0 warnings | 0 notes
G2Sd (2.1.5)
Maintainer: Regis K. Gallon reg.gallon@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘G2Sd’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/G2Sd.Rcheck/00install.out’ for details.
gapfill (0.9.3)
Maintainer: Florian Gerber florian.gerber@math.uzh.ch
2 errors | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘gapfill-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Image
> ### Title: Image Panels
> ### Aliases: Image
>
> ### ** Examples
>
> Image(ndvi)
Error in theme(line = element_blank(), strip.background = element_rect(fill = "white", :
formal argument "line" matched by multiple actual arguments
Calls: Image -> theme
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
4: theme(line = element_blank(), strip.background = element_rect(fill = "white", color = "white"),
strip.text.x = element_text(), strip.text.y = element_text(), axis.ticks = element_blank(),
axis.text.x = element_blank(), axis.text.y = element_blank(), axis.title.x = element_blank(),
axis.title.y = element_blank(), line = element_blank(), legend.position = "right",
panel.border = element_blank(), plot.margin = unit(c(1, 1, 1, 1), "mm"), panel.margin = unit(2,
"mm"))
testthat results ================================================================
OK: 859 SKIPPED: 0 FAILED: 1
1. Error: Image (@test-Image.R#5)
Error: testthat unit tests failed
Execution halted
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘doMPI’
checking R code for possible problems ... NOTE
Image: possible error in theme(line = element_blank(), strip.background
= element_rect(fill = "white", color = "white"), strip.text.x =
element_text(), strip.text.y = element_text(), axis.ticks =
element_blank(), axis.text.x = element_blank(), axis.text.y =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), line = element_blank(), legend.position = "right",
panel.border = element_blank(), plot.margin = unit(c(1, 1, 1, 1),
"mm"), panel.margin = unit(2, "mm")): formal argument "line" matched
by multiple actual arguments
gapmap (0.0.4)
Maintainer: Ryo Sakai ryo@vda-lab.be
0 errors | 0 warnings | 0 notes
gapminder (0.2.0)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca Bug reports: https://github.com/jennybc/gapminder/issues
0 errors | 0 warnings | 0 notes
gcerisk (16.1.3)
Maintainer: Hanjie Shen shenhanjie0418@gmail.com
0 errors | 0 warnings | 0 notes
gcookbook (1.0)
Maintainer: Winston Chang winston@stdout.org
0 errors | 0 warnings | 0 notes
GDAdata (0.93)
Maintainer: Antony Unwinunwin@math.uni-augsburg.de
0 errors | 0 warnings | 0 notes
GenCAT (1.0.3)
Maintainer: Eric Reed reeder@bu.edu
1 error | 1 warning | 3 notes
checking examples ... ERROR
Running examples in ‘GenCAT-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GenCAT
> ### Title: Running GenCAT
> ### Aliases: GenCAT
> ### Keywords: ~kwd1 ~kwd2
>
... 15 lines ...
SNP effect_allele other_allele testStat chr position class
17232 rs9572807 C T -0.3014771 13 72423959 DACH1
24151 rs4389009 G A -1.4443860 13 99193519 STK24
37178 rs7151730 T A 0.1387317 14 33531585 NPAS3
58941 rs1076958 G A 2.0597766 14 91131857 TTC7B
13089 rs7987481 G A -1.0024210 13 47318950 LRCH1
58302 rs411064 G A 0.2132412 14 90008860 FOXN3
>
> library(snpStats)
Error in library(snpStats) : there is no package called ‘snpStats’
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: dplyr
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Loading required package: ggplot2
Quitting from lines 62-69 (GenCAT-vignette.Rmd)
Error: processing vignette 'GenCAT-vignette.Rmd' failed with diagnostics:
unable to find required package 'snpStats'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘snpStats’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘snpStats’
checking data for non-ASCII characters ... NOTE
Error in .requirePackage(package) :
unable to find required package 'snpStats'
Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
Execution halted
gender (0.5.1)
Maintainer: Lincoln Mullen lincoln@lincolnmullen.com Bug reports: https://github.com/ropensci/gender/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘genderdata’
geneSLOPE (0.37.0)
Maintainer: Piotr Sobczyk piotr.sobczyk@pwr.edu.pl Bug reports: https://github.com/psobczyk/geneSLOPE/issues
0 errors | 0 warnings | 0 notes
genomeplot (1.0)
Maintainer: Jing Xuxujingaddressee@foxmail.com
0 errors | 0 warnings | 0 notes
geoknife (1.4.0)
Maintainer: Jordan Read jread@usgs.gov Bug reports: https://github.com/USGS-R/geoknife/issues
0 errors | 0 warnings | 0 notes
geomnet (0.1.2.1)
Maintainer: Samantha Tyner sctyner@iastate.edu Bug reports: https://github.com/sctyner/geomnet/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘geomnet-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: football
> ### Title: College football games network (undirected)
> ### Aliases: football
> ### Keywords: datasets
>
... 23 lines ...
+ layout = 'fruchtermanreingold'
+ ) +
+ theme_net() +
+ theme(legend.position = "bottom") +
+ scale_colour_brewer("Conference", palette = "Paired") +
+ guides(linetype = FALSE)
Warning: Ignoring unknown aesthetics: label
Error in get(name, envir = asNamespace(pkg), inherits = FALSE) :
object 'panel_scales' not found
Calls: <Anonymous> ... f -> <Anonymous> -> f -> <Anonymous> -> f -> ::: -> get
Execution halted
GERGM (0.10.0)
Maintainer: Matthew J. Denny mdenny@psu.edu
0 errors | 0 warnings | 0 notes
GetHFData (1.2.0)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
GetTDData (1.2.4)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
gettingtothebottom (3.2)
Maintainer: Jocelyn T. Chi jocelynchi@alum.berkeley.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
example.alpha: no visible global function definition for ‘rnorm’
example.quadratic.approx: no visible global function definition for
‘rnorm’
generate_nnm: no visible global function definition for ‘rnorm’
generate_nnm: no visible global function definition for ‘rgamma’
generate_nnm: no visible global function definition for ‘dnorm’
plot_nnm: no visible global function definition for ‘stack’
testmatrix: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
dnorm rgamma rnorm stack
Consider adding
importFrom("stats", "dnorm", "rgamma", "rnorm")
importFrom("utils", "stack")
to your NAMESPACE file.
gfcanalysis (1.4)
Maintainer: Alex Zvoleff azvoleff@conservation.org Bug reports: https://github.com/azvoleff/gfcanalysis/issues
0 errors | 0 warnings | 0 notes
GGally (1.2.0)
Maintainer: Barret Schloerke schloerke@gmail.com Bug reports: https://github.com/ggobi/ggally/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘GGally-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: +.gg
> ### Title: Modify a ggmatrix object by adding an ggplot2 object to all
> ### plots
> ### Aliases: +.gg
>
> ### ** Examples
>
> data(tips, package = "reshape")
> pm <- ggpairs(tips[, 2:3])
> ## change to black and white theme
> pm + ggplot2::theme_bw()
Warning: `panel.margin` is deprecated. Please use `panel.spacing` property instead
Error in FUN(X[[i]], ...) :
only defined on a data frame with all numeric variables
Calls: <Anonymous> ... [ -> [.gtable -> Summary.data.frame -> lapply -> FUN
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Failure: stops (@test-ggmatrix_getput.R#23)
2. Failure: stops (@test-ggmatrix_getput.R#23)
3. Failure: stops (@test-ggmatrix_getput.R#23)
4. Failure: stops (@test-ggmatrix_getput.R#23)
5. Failure: stops (@test-ggmatrix_getput.R#23)
6. Failure: stops (@test-ggmatrix_getput.R#23)
7. Error: order (@test-ggparcoord.R#222)
8. Error: axisLabels (@test-zzz_ggpairs.R#350)
9. Error: strips and axis (@test-zzz_ggpairs.R#373)
10. Error: subtypes (@test-zzz_ggpairs.R#614)
Error: testthat unit tests failed
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
ggalt (0.1.1)
Maintainer: Bob Rudis bob@rudis.net Bug reports: https://github.com/hrbrmstr/ggalt/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘ggalt-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coord_proj
> ### Title: Similar to 'coord_map' but uses the PROJ.4 library/package for
> ### projection transformation
> ### Aliases: coord_proj
>
... 7 lines ...
>
> gg <- ggplot()
> gg <- gg + geom_map(data=world, map=world,
+ aes(x=long, y=lat, map_id=region))
Warning: Ignoring unknown aesthetics: x, y
> gg <- gg + coord_proj("+proj=wintri")
> gg
Error in gPathFromVector(names) :
a 'grob' path must contain at least one 'grob' name
Calls: <Anonymous> ... valid.data -> recycle.data -> gPath -> gPathFromVector
Execution halted
ggbeeswarm (0.5.0)
Maintainer: Erik Clarke erikclarke@gmail.com
0 errors | 0 warnings | 0 notes
ggcorrplot (0.1.1)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com Bug reports: https://github.com/kassambara/ggcorrplot/issues
0 errors | 0 warnings | 0 notes
ggdendro (0.1-20)
Maintainer: Andrie de Vries apdevries@gmail.com Bug reports: https://github.com/andrie/ggdendro/issues
0 errors | 0 warnings | 0 notes
ggdmc (0.1.3.5)
Maintainer: Yi-Shin Lin yishin.lin@utas.edu.au Bug reports: https://github.com/TasCL/ggdmc/issues
0 errors | 0 warnings | 0 notes
ggenealogy (0.2.0)
Maintainer: Lindsay Rutter lrutter@iastate.edu
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
conversion failure on 'Barbara Choroś-Tomczyk' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Barbara Choroś-Tomczyk' in 'mbcsToSbcs': dot substituted for <9b>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Ondřej Chochola' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Ondřej Chochola' in 'mbcsToSbcs': dot substituted for <99>
... 8 lines ...
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <8c>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <c5>
Warning in graphics::strwidth(pMPDF$label, "inches") :
conversion failure on 'Peter Čerňanský' in 'mbcsToSbcs': dot substituted for <88>
Error: processing vignette 'ggenealogy.Rnw' failed with diagnostics:
chunk 57 (label = plotAnimate)
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Execution halted
ggExtra (0.5)
Maintainer: Dean Attali daattali@gmail.com Bug reports: https://github.com/daattali/ggExtra/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggExtra-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ggMarginal
> ### Title: Add marginal density/histogram to ggplot2 scatterplots
> ### Aliases: ggMarginal
>
> ### ** Examples
>
>
> # basic usage
> p <- ggplot2::ggplot(mtcars, ggplot2::aes(wt, mpg)) + ggplot2::geom_point()
> ggMarginal(p)
Warning in mean.default(getLimits(pbTop, "y")) :
argument is not numeric or logical: returning NA
Error: Don't know how to add o to a plot
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 94-95 (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Don't know how to add o to a plot
Execution halted
ggfortify (0.2.0)
Maintainer: Masaaki Horikoshi sinhrks@gmail.com
1 error | 0 warnings | 1 note
checking tests ... ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
testthat results ================================================================
OK: 1072 SKIPPED: 4 FAILED: 7
1. Failure: fortify.bats works for austres (@test-forecast.R#96)
2. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#180)
3. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#181)
4. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#182)
5. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#189)
6. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#190)
7. Failure: autoplot ts works for multivariate timeseries (@test-ts.R#191)
Error: testthat unit tests failed
Execution halted
checking installed package size ... NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
doc 4.9Mb
ggghost (0.2.1)
Maintainer: Jonathan Carroll rpkg@jcarroll.com.au Bug reports: https://github.com/jonocarroll/ggghost/issues
0 errors | 0 warnings | 0 notes
ggiraph (0.3.2)
Maintainer: David Gohel david.gohel@ardata.fr Bug reports: https://github.com/davidgohel/ggiraph/issues
0 errors | 0 warnings | 0 notes
gglogo (0.1.2)
Maintainer: Eric Hare erichare@iastate.edu Bug reports: https://github.com/heike/gglogo/issues
0 errors | 0 warnings | 0 notes
ggloop (0.1.0)
Maintainer: Luke Smith luke@protocolvital.info Bug reports: https://github.com/seasmith/ggloop/issues
0 errors | 0 warnings | 0 notes
ggmap (2.6.1)
Maintainer: David Kahle david.kahle@gmail.com Bug reports: https://github.com/dkahle/ggmap/issues
0 errors | 0 warnings | 0 notes
ggmcmc (1.1)
Maintainer: Xavier Fernández i Marín xavier.fim@gmail.com Bug reports: https://github.com/xfim/ggmcmc/issues
0 errors | 0 warnings | 0 notes
ggnetwork (0.5.1)
Maintainer: Francois Briatte f.briatte@gmail.com
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggnetwork-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_edgetext_repel
> ### Title: Draw repulsive edge labels.
> ### Aliases: geom_edgelabel_repel geom_edgetext_repel
>
> ### ** Examples
... 41 lines ...
Loading required package: sna
Loading required package: statnet.common
sna: Tools for Social Network Analysis
Version 2.4 created on 2016-07-23.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
For citation information, type citation("sna").
Type help(package="sna") to get started.
Error: GeomLabelRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
7: fetch_ggproto(x, name) at /Users/hadley/Documents/ggplot/ggplot2/R/ggproto.r:135
8: stop(class(x)[[1]], " was built with an incompatible version of ggproto.\n", "Please reinstall the package that provides this extension.",
call. = FALSE) at /Users/hadley/Documents/ggplot/ggplot2/R/ggproto.r:122
testthat results ================================================================
OK: 11 SKIPPED: 0 FAILED: 4
1. Error: geom_nodetext_repel works (@test-geoms.R#34)
2. Error: geom_nodelabel_repel works (@test-geoms.R#58)
3. Error: geom_edgetext_repel works (@test-geoms.R#101)
4. Error: geom_edgelabel_repel works (@test-geoms.R#108)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
network: Classes for Relational Data
Version 1.13.0 created on 2015-08-31.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
Mark S. Handcock, University of California -- Los Angeles
David R. Hunter, Penn State University
Martina Morris, University of Washington
Skye Bender-deMoll, University of Washington
For citation information, type citation("network").
Type help("network-package") to get started.
Loading required package: statnet.common
sna: Tools for Social Network Analysis
Version 2.4 created on 2016-07-23.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
For citation information, type citation("sna").
Type help(package="sna") to get started.
Quitting from lines 199-205 (ggnetwork.Rmd)
Error: processing vignette 'ggnetwork.Rmd' failed with diagnostics:
GeomLabelRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggparallel (0.1.2)
Maintainer: Heike Hofmann hofmann@iastate.edu
0 errors | 0 warnings | 0 notes
ggpmisc (0.2.12)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/ggpmisc/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘ggpmisc-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: stat_dens2d_filter
> ### Title: Filter observations in high density regions.
> ### Aliases: stat_dens2d_filter stat_dens2d_filter_g
>
> ### ** Examples
... 39 lines ...
>
> ggplot(data = d, aes(x, y, label = lab, color = group)) +
+ geom_point() +
+ stat_dens2d_filter(geom = "text")
>
> ggplot(data = d, aes(x, y, label = lab, color = group)) +
+ geom_point() +
+ stat_dens2d_filter(geom = "text_repel")
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 680-683 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggpolypath (0.1.0)
Maintainer: Michael D. Sumner mdsumner@gmail.com Bug reports: https://github.com/mdsumner/ggpolypath/issues
0 errors | 0 warnings | 0 notes
ggpubr (0.1.0)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com Bug reports: https://github.com/kassambara/ggpubr/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘ggpubr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: diff_express
> ### Title: Differential gene expression analysis results
> ### Aliases: diff_express
>
> ### ** Examples
... 6 lines ...
+ fdr = 0.05, fc = 2, size = 0.4,
+ palette = c("#B31B21", "#1465AC", "darkgray"),
+ genenames = as.vector(diff_express$name),
+ legend = "top", top = 20,
+ font.label = c("bold", 11),
+ font.legend = "bold",
+ font.main = "bold",
+ ggtheme = ggplot2::theme_minimal())
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
ggRandomForests (2.0.1)
Maintainer: John Ehrlinger john.ehrlinger@gmail.com Bug reports: https://github.com/ehrlinger/ggRandomForests/issues
0 errors | 0 warnings | 0 notes
ggraptR (0.1)
Maintainer: Eugene Dubossarsky eugene@presciient.com Bug reports: https://github.com/cargomoose/raptR/issues
0 errors | 0 warnings | 0 notes
ggrepel (0.6.3)
Maintainer: Kamil Slowikowski kslowikowski@fas.harvard.edu Bug reports: http://github.com/slowkow/ggrepel/issues
0 errors | 0 warnings | 0 notes
ggROC (1.0)
Maintainer: Honglong Wu wuhonglong.china@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
‘ggplot2’
A package should be listed in only one of these fields.
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
ggroc: no visible global function definition for ‘ggplot’
ggroc: no visible global function definition for ‘aes’
ggroc: no visible global function definition for ‘geom_point’
ggroc: no visible global function definition for ‘geom_line’
ggroc: no visible global function definition for ‘theme’
ggroc: no visible global function definition for ‘element_text’
ggroc: no visible global function definition for ‘labs’
ggroc: no visible global function definition for ‘ggsave’
Undefined global functions or variables:
aes element_text geom_line geom_point ggplot ggsave labs theme
ggsci (1.5)
Maintainer: Nan Xiao me@nanx.me Bug reports: https://github.com/road2stat/ggsci/issues
0 errors | 0 warnings | 0 notes
ggseas (0.5.1)
Maintainer: Peter Ellis peter.ellis2013nz@gmail.com Bug reports: https://github.com/ellisp/ggseas/issues
0 errors | 0 warnings | 0 notes
ggsn (0.3.1)
Maintainer: Oswaldo Santos Baquero oswaldosant@gmail.com
0 errors | 0 warnings | 0 notes
ggspectra (0.1.10)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/ggspectra
0 errors | 0 warnings | 0 notes
ggswissmaps (0.1.1)
Maintainer: Sandro Petrillo Burri gibo.gaf@gmail.com
0 errors | 0 warnings | 0 notes
ggtern (2.1.4)
Maintainer: Nicholas Hamilton nick@ggtern.com
1 error | 0 warnings | 0 notes
checking whether package ‘ggtern’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ggtern.Rcheck/00install.out’ for details.
ggThemeAssist (0.1.5)
Maintainer: Calli Gross ggthemeassist@icloud.com
0 errors | 0 warnings | 0 notes
ggthemes (3.2.0)
Maintainer: Jeffrey B. Arnold jeffrey.arnold@gmail.com Bug reports: http://github.com/jrnold/ggthemes
0 errors | 0 warnings | 0 notes
githubinstall (0.1.0)
Maintainer: Koji Makiyama hoxo.smile@gmail.com Bug reports: https://github.com/hoxo-m/githubinstall/issues
0 errors | 0 warnings | 0 notes
gitter (1.1.1)
Maintainer: Omar Wagih wagih@ebi.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘EBImage’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
glinternet (1.0.0)
Maintainer: Michael Lim michael626@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
extract_effects : extract_interaction : <anonymous>: no visible global
function definition for ‘lm’
extract_effects : extract_main_effect : <anonymous>: no visible global
function definition for ‘lm’
glinternet.cv: no visible global function definition for ‘predict’
glinternet.cv: no visible binding for global variable ‘sd’
plot.glinternet.cv: no visible global function definition for ‘plot’
plot.glinternet.cv: no visible global function definition for
‘segments’
plot.glinternet.cv: no visible global function definition for ‘abline’
plot.glinternet.cv: no visible global function definition for ‘axis’
predict.glinternet.cv: no visible global function definition for
‘predict’
Undefined global functions or variables:
abline axis lm plot predict sd segments
Consider adding
importFrom("graphics", "abline", "axis", "plot", "segments")
importFrom("stats", "lm", "predict", "sd")
to your NAMESPACE file.
glycanr (0.3.0)
Maintainer: Ivo Ugrina ivo@iugrina.com Bug reports: https://github.com/iugrina/glycanr/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘glycanr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: quantilenorm
> ### Title: Quantile Normalization of glycan data
> ### Aliases: quantilenorm
>
> ### ** Examples
>
> data(mpiu)
> mpiun <- quantilenorm(mpiu)
Error in quantilenorm(mpiu) :
Unable to proceed since package preprocessCore from
BioConductor is not available on this system. This
package is a prerequisite to use the quantilenorm function!
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Error in quantilenorm(mpiu, transpose = TRUE) :
Unable to proceed since package preprocessCore from
BioConductor is not available on this system. This
package is a prerequisite to use the quantilenorm function!
Calls: test_check ... force -> source_file -> eval -> eval -> quantilenorm
testthat results ================================================================
OK: 5 SKIPPED: 0 FAILED: 0
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘preprocessCore’
gmum.r (0.2.1)
Maintainer: Stanislaw Jastrzebski staszek.jastrzebski@gmail.com Bug reports: https://github.com/gmum/gmum.r/issues
0 errors | 0 warnings | 0 notes
gmwm (2.0.0)
Maintainer: Stephane Guerrier stephane@illinois.edu Bug reports: https://github.com/SMAC-Group/gmwm/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘imudata’
gogamer (0.4.3)
Maintainer: Kota Mori kmori05@gmail.com Bug reports: https://github.com/kota7/gogamer/issues
0 errors | 0 warnings | 0 notes
googlesheets (0.2.1)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca Bug reports: https://github.com/jennybc/googlesheets/issues
0 errors | 0 warnings | 0 notes
GOplot (1.0.2)
Maintainer: Wencke Walter wencke.walter@arcor.de Bug reports: https://github.com/wencke/wencke.github.io/issues
0 errors | 0 warnings | 0 notes
gpmap (0.1.1)
Maintainer: Arne B. Gjuvsland arne.gjuvsland@nmbu.no
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Checking should be performed on sources prepared by ‘R CMD build’.
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘foreach’ ‘ggplot2’ ‘isotone’ ‘plyr’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
decompose_monotone: no visible global function definition for ‘%dopar%’
decompose_monotone: no visible global function definition for ‘foreach’
decompose_monotone: no visible global function definition for ‘%do%’
decompose_monotone_single: no visible global function definition for
‘%dopar%’
decompose_monotone_single: no visible global function definition for
‘foreach’
decompose_monotone_single: no visible global function definition for
‘laply’
... 50 lines ...
plot3_orig: no visible global function definition for ‘aes_string’
plot3_orig: no visible global function definition for ‘geom_line’
plot3_orig: no visible global function definition for ‘facet_wrap’
plot3_orig: no visible global function definition for ‘as.formula’
plot3_orig: no visible global function definition for ‘labs’
Undefined global functions or variables:
%do% %dopar% aaply activeSet aes_string as.formula facet_grid
facet_wrap foreach geom_line geom_point ggplot labs laply var
Consider adding
importFrom("stats", "as.formula", "var")
to your NAMESPACE file.
granovaGG (1.4.0)
Maintainer: Brian A. Danielak brian@briandk.com
0 errors | 0 warnings | 0 notes
Greg (1.2)
Maintainer: Max Gordon max@gforge.se
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘Greg-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: simpleRmsAnova
> ### Title: A simpler latex output of the latex.anova.rms
> ### Aliases: print.simpleRmsAnova simpleRmsAnova
> ### Keywords: internal
>
> ### ** Examples
>
> # ** Borrowed code from the lrm example **
>
> #Fit a logistic model containing predictors age, blood.pressure, sex
> #and cholesterol, with age fitted with a smooth 5-knot restricted cubic
> #spline function and a different shape of the age relationship for males
> #and females.
>
> library(rms)
Loading required package: Hmisc
Loading required package: lattice
Error: package ‘survival’ 2.39.5 was found, but >= 2.40.1 is required by ‘Hmisc’
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
2: .getRequiredPackages2(pkgInfo, quietly = quietly)
3: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc, quietly = quietly)
4: .getRequiredPackages2(pkgInfo, quietly = quietly)
5: stop(gettextf(msg, sQuote(pkg), current, dep$op, target, sQuote(pkgname)), call. = FALSE,
domain = NA)
Error: package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
testthat results ================================================================
OK: 12 SKIPPED: 0 FAILED: 1
1. Error: That rms-functions work (@test-addNonlinearity.R#108)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: forestplot
Loading required package: grid
Loading required package: magrittr
Loading required package: Gmisc
Loading required package: Rcpp
Loading required package: htmlTable
Loading required package: lattice
Quitting from lines 56-65 (Print_crude_and_adjusted_models.Rmd)
Error: processing vignette 'Print_crude_and_adjusted_models.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
greport (0.7-1)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking whether package ‘greport’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/greport.Rcheck/00install.out’ for details.
gridDebug (0.5-0)
Maintainer: Paul Murrell p.murrell@auckland.ac.nz
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘graph’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
gridExtra (2.2.1)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 0 notes
gridsampler (0.5)
Maintainer: Mark Heckmann heckmann.mark@gmail.com Bug reports: https://github.com/markheckmann/gridsampler/issues
0 errors | 0 warnings | 0 notes
growcurves (0.2.4.0)
Maintainer: Terrance Savitsky tds151@gmail.com
0 errors | 0 warnings | 0 notes
growfunctions (0.13)
Maintainer: Terrance Savitsky tds151@gmail.com
0 errors | 0 warnings | 0 notes
growthcurver (0.2.1)
Maintainer: Kathleen sprouffske sprouffske@gmail.com Bug reports: https://github.com/sprouffske/growthcurver/issues
0 errors | 0 warnings | 0 notes
gsDesign (3.0-1)
Maintainer: Keaven Anderson keaven_anderson@merck.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
plotgsCP: no visible global function definition for ‘opts’
plotgsPower: no visible global function definition for ‘opts’
qplotit: no visible global function definition for ‘opts’
Undefined global functions or variables:
opts
GSE (4.0)
Maintainer: Andy Leung andy.leung@stat.ubc.ca
0 errors | 0 warnings | 0 notes
gtrendsR (1.3.5)
Maintainer: Philippe Massicotte pmassicotte@hotmail.com Bug reports: https://github.com/PMassicotte/gtrendsR/issues
0 errors | 0 warnings | 0 notes
gunsales (0.1.1)
Maintainer: Dirk Eddelbuettel edd@debian.org
0 errors | 0 warnings | 0 notes
gutenbergr (0.1.2)
Maintainer: David Robinson admiral.david@gmail.com Bug reports: http://github.com/ropenscilabs/gutenbergr/issues
0 errors | 0 warnings | 0 notes
gwdegree (0.1.1)
Maintainer: Michael Levy malevy@ucdavis.edu Bug reports: https://github.com/michaellevy/gwdegree/issues
0 errors | 0 warnings | 0 notes
gWQS (1.0.0)
Maintainer: Stefano Renzetti stefano.renzetti88@gmail.com
0 errors | 0 warnings | 0 notes
h2o (3.10.0.8)
Maintainer: Tom Kraljevic tomk@0xdata.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 63.6Mb
sub-directories of 1Mb or more:
java 62.4Mb
hazus (0.1)
Maintainer: Gopi Goteti my.ration.shop@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
extract_hazus_functions: no visible global function definition for
‘data’
Undefined global functions or variables:
data
Consider adding
importFrom("utils", "data")
to your NAMESPACE file.
hBayesDM (0.2.3.1)
Maintainer: Woo-Young Ahn ahn.280@osu.edu
0 errors | 0 warnings | 0 notes
hdm (0.2.0)
Maintainer: Martin Spindler spindler@mea.mpisoc.mpg.de
0 errors | 0 warnings | 0 notes
hdnom (4.2)
Maintainer: Nan Xiao me@nanx.me Bug reports: https://github.com/road2stat/hdnom/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘hdnom-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hdcox.aenet
> ### Title: Adaptive Elastic-Net Model Selection for High-Dimensional Cox
> ### Models
> ### Aliases: hdcox.aenet
>
> ### ** Examples
>
> library("survival")
> library("rms")
Loading required package: Hmisc
Loading required package: lattice
Error: package ‘survival’ 2.39.5 is loaded, but >= 2.40.1 is required by ‘Hmisc’
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 135-144 (hdnom.Rmd)
Error: processing vignette 'hdnom.Rmd' failed with diagnostics:
package 'survival' 2.39.5 is loaded, but >= 2.40.1 is required by 'Hmisc'
Execution halted
hdr (0.1)
Maintainer: Eric Persson expersso5@gmail.com Bug reports: https://github.com/expersso/hdr
0 errors | 0 warnings | 0 notes
heatmaply (0.6.0)
Maintainer: Tal Galili tal.galili@gmail.com Bug reports: https://github.com/talgalili/heatmaply/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘heatmaply-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: heatmapr
> ### Title: Creates a heatmapr object
> ### Aliases: heatmapr
>
> ### ** Examples
>
> library(heatmaply)
> hm <- heatmapr(mtcars, scale = "column", colors = "Blues")
> heatmaply(hm)
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: heatmaply ... heatmaply.heatmapr -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
The following object is masked from 'package:stats':
filter
The following object is masked from 'package:graphics':
layout
... 8 lines ...
Suggestions and bug-reports can be submitted at: https://github.com/talgalili/heatmaply/issues
Or contact: <tal.galili@gmail.com>
To suppress this message use: suppressPackageStartupMessages(library(heatmaply))
---------------------
Quitting from lines 83-85 (heatmaply.Rmd)
Error: processing vignette 'heatmaply.Rmd' failed with diagnostics:
attempt to apply non-function
Execution halted
heemod (0.5.1)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com Bug reports: https://github.com/pierucci/heemod/issues
0 errors | 0 warnings | 0 notes
heuristica (1.0.1)
Maintainer: Jean Whitmore jeanimal@gmail.com Bug reports: https://github.com/jeanimal/heuristica/issues
0 errors | 0 warnings | 0 notes
hierarchicalDS (2.9)
Maintainer: Paul B Conn paul.conn@noaa.gov
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
calc_linex_a: no visible global function definition for ‘optimize’
generate_inits: no visible global function definition for ‘rnorm’
generate_inits: no visible global function definition for ‘runif’
generate_inits: no visible global function definition for ‘rpois’
generate_inits_misID: no visible global function definition for ‘runif’
generate_inits_misID: no visible global function definition for ‘rnorm’
generate_inits_misID: no visible global function definition for ‘rpois’
get_confusion_array: no visible global function definition for
‘model.matrix’
... 34 lines ...
table.mcmc: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
abline dnorm dpois legend median model.matrix optimize par plot pnorm
points rgamma rnorm rpois runif var write.csv
Consider adding
importFrom("graphics", "abline", "legend", "par", "plot", "points")
importFrom("stats", "dnorm", "dpois", "median", "model.matrix",
"optimize", "pnorm", "rgamma", "rnorm", "rpois", "runif",
"var")
importFrom("utils", "write.csv")
to your NAMESPACE file.
hierarchicalSets (1.0.2)
Maintainer: Thomas Lin Pedersen thomasp85@gmail.com
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
‘ggplot2:::build_guides’ ‘ggplot2:::guide_axis’
‘ggplot2:::scales_list’
See the note in ?`:::` about the use of this operator.
highcharter (0.4.0)
Maintainer: Joshua Kunst jbkunst@gmail.com Bug reports: https://github.com/jbkunst/highcharter/issues
0 errors | 0 warnings | 0 notes
HighDimOut (1.0.0)
Maintainer: Cheng Fan raja8885@hotmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Func.ABOD: no visible global function definition for ‘combn’
Func.ABOD: no visible global function definition for ‘var’
Func.SOD: no visible global function definition for ‘var’
Func.trans : erf: no visible global function definition for ‘pnorm’
Func.trans: no visible global function definition for ‘sd’
Undefined global functions or variables:
combn pnorm sd var
Consider adding
importFrom("stats", "pnorm", "sd", "var")
importFrom("utils", "combn")
to your NAMESPACE file.
HistData (0.7-8)
Maintainer: Michael Friendly friendly@yorku.ca
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Guerry’, ‘alr3’, ‘agridat’
HistDAWass (0.1.4)
Maintainer: Antonio Irpino antonio.irpino@unina2.it
0 errors | 0 warnings | 0 notes
historydata (0.1)
Maintainer: Lincoln Mullen lincoln@lincolnmullen.com Bug reports: https://github.com/ropensci/historydata/issues
0 errors | 0 warnings | 0 notes
HiveR (0.2.55)
Maintainer: Bryan A. Hanson hanson@depauw.edu Bug reports: https://github.com/bryanhanson/HiveR/issues
0 errors | 0 warnings | 0 notes
HLMdiag (0.3.1)
Maintainer: Adam Loy loyad01@gmail.com Bug reports: https://github.com/aloy/HLMdiag/issues
0 errors | 0 warnings | 0 notes
Hmisc (4.0-0)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
HRM (0.3.5)
Maintainer: Martin Happ martin.happ@aon.at
0 errors | 0 warnings | 0 notes
HTSSIP (1.0.3)
Maintainer: Nicholas Youngblut nyoungb2@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘DESeq2’ ‘phyloseq’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
httk (1.4)
Maintainer: John Wambaugh wambaugh.john@epa.gov
0 errors | 0 warnings | 0 notes
HWxtest (1.1.7)
Maintainer: Bill Engels wrengels@wisc.edu
0 errors | 0 warnings | 0 notes
hybridModels (0.2.6)
Maintainer: Fernando S. Marques fernandosix@gmail.com Bug reports: https://github.com/fernandosm/hybridModels/issues
0 errors | 0 warnings | 0 notes
hyfo (1.3.6)
Maintainer: Yuanchao Xu xuyuanchao37@gmail.com Bug reports: https://github.com/Yuanchao-Xu/hyfo/issues
0 errors | 0 warnings | 0 notes
hyperSpec (0.98-20150304)
Maintainer: Claudia Beleites chemometrie@beleites.de
1 error | 1 warning | 1 note
checking examples ... ERROR
Running examples in ‘hyperSpec-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qplotspc
> ### Title: Spectra plotting with ggplot2
> ### Aliases: qplotspc
>
> ### ** Examples
>
> qplotspc (chondro)
Warning in qplotspc(chondro) :
Number of spectra exceeds spc.nmax. Only the first 10 are plotted.
> qplotspc (paracetamol, c (2800 ~ max, min ~ 1800)) + scale_x_reverse (breaks = seq (0, 3200, 400))
Error in gtable_add_grob(panel_table, strips$x$top, 2, panel_pos_col$l, :
Not all inputs have either length 1 or same length same as 'grobs'
Calls: <Anonymous> ... <Anonymous> -> f -> <Anonymous> -> f -> gtable_add_grob
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in plotc(x, ...) : Intensity at first wavelengh only is used.
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'x' values are not equispaced; output may be wrong
Warning in hyperSpec:::.levelplot(x, data, ...) :
Only first wavelength is used for plotting
Loading required package: latticeExtra
Loading required package: RColorBrewer
... 8 lines ...
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'x' values are not equispaced; output may be wrong
Warning in (function (x, y, z, subscripts, at = pretty(z), ..., col.regions = regions$col, :
'y' values are not equispaced; output may be wrong
Warning: Ignoring unknown aesthetics: y
Error: processing vignette 'plotting.Rnw' failed with diagnostics:
chunk 77 (label = ggplot2-do)
Error in gtable_add_grob(panel_table, strips$x$top, 2, panel_pos_col$l, :
Not all inputs have either length 1 or same length same as 'grobs'
Execution halted
checking R code for possible problems ... NOTE
Warning: local assignments to syntactic functions: ~
Warning: local assignments to syntactic functions: ~
.cut.ticks: no visible global function definition for ‘head’
.jdx.TABULAR.PAC: no visible global function definition for ‘head’
.jdx.hdr.concentrations: no visible global function definition for
‘modifyList’
.jdx.readhdr: no visible global function definition for ‘maintainer’
.labels: no visible global function definition for ‘modifyList’
.levelplot: no visible global function definition for ‘modifyList’
... 56 lines ...
‘modifyList’
plot,hyperSpec-character: no visible global function definition for
‘modifyList’
Undefined global functions or variables:
chull col2rgb colorRampPalette head maintainer modifyList read.table
relist rgb str tail unstack write.table
Consider adding
importFrom("grDevices", "chull", "col2rgb", "colorRampPalette", "rgb")
importFrom("utils", "head", "maintainer", "modifyList", "read.table",
"relist", "str", "tail", "unstack", "write.table")
to your NAMESPACE file.
IAPWS95 (1.0.0)
Maintainer: Benedito Baptista bene46@msn.com
1 error | 0 warnings | 0 notes
checking whether package ‘IAPWS95’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/IAPWS95.Rcheck/00install.out’ for details.
IAT (0.3)
Maintainer: Dan Martin dpmartin42@gmail.com
0 errors | 0 warnings | 0 notes
ibmdbR (1.48.0)
Maintainer: Alexander Eckert inza@de.ibm.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RODBC’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
icarus (0.2.2)
Maintainer: Antoine Rebecq antoine.rebecq@m4x.org
0 errors | 0 warnings | 0 notes
icd9 (1.3.1)
Maintainer: Jack O. Wasey jack@jackwasey.com Bug reports: https://github.com/jackwasey/icd9/issues
0 errors | 0 warnings | 0 notes
idm (1.7.1)
Maintainer: Angelos Markos amarkos@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘idm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: i_mca
> ### Title: Incremental Multiple Correspondence Analysis (MCA)
> ### Aliases: i_mca
>
> ### ** Examples
>
> ##Example 1 - Exact case
> data("women", package = "idm")
> nc = 5 # number of chunks
> res_iMCAh = i_mca(data1 = women[1:300,1:7], data2 = women[301:2107,1:7]
+ ,method = "exact", nchunk = nc)
> #static MCA plot of attributes on axes 2 and 3
> plot(x = res_iMCAh, dim = c(2,3), what = c(FALSE,TRUE), animation = FALSE)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
** found \donttest examples: check also with --run-donttest
ie2miscdata (1.0.1)
Maintainer: Irucka Embry iembry@usgs.gov Bug reports: https://github.com/iembry-USGS/ie2miscdata/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Error in (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE, :
there is no package called 'states2k'
Quitting from lines 24-109 (US-Engineering-Weather-Map.Rmd)
Error: processing vignette 'US-Engineering-Weather-Map.Rmd' failed with diagnostics:
object 'states2k_map' not found
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘states2k’
ifaTools (0.13)
Maintainer: Joshua N. Pritikin jpritikin@pobox.com
0 errors | 0 warnings | 0 notes
IGM.MEA (0.3.4)
Maintainer: Sahar Gelfman sg3261@columbia.edu
0 errors | 0 warnings | 0 notes
imageData (0.1-26)
Maintainer: Chris Brien Chris.Brien@unisa.edu.au
1 error | 0 warnings | 0 notes
checking whether package ‘imageData’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/imageData.Rcheck/00install.out’ for details.
imager (0.31)
Maintainer: Simon Barthelme simon.barthelme@gipsa-lab.fr Bug reports: https://github.com/dahtah/imager/issues
0 errors | 1 warning | 1 note
checking whether package ‘imager’ can be installed ... WARNING
Found the following significant warnings:
../inst/include/CImg.h:13559:29: warning: multiple unsequenced modifications to 'ptrs' [-Wunsequenced]
../inst/include/CImg.h:13738:19: warning: multiple unsequenced modifications to 'ptrs' [-Wunsequenced]
../inst/include/CImg.h:22316:23: warning: unsequenced modification and access to 'right' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: unsequenced modification and access to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: multiple unsequenced modifications to '_n3x' [-Wunsequenced]
../inst/include/CImg.h:29395:35: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:29415:40: warning: unsequenced modification and access to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:29415:40: warning: multiple unsequenced modifications to '_n3x' [-Wunsequenced]
... 9 lines ...
../inst/include/CImg.h:29478:40: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:30531:19: warning: unsequenced modification and access to 'right' [-Wunsequenced]
../inst/include/CImg.h:31964:17: warning: multiple unsequenced modifications to '_n2x' [-Wunsequenced]
../inst/include/CImg.h:31964:17: warning: unsequenced modification and access to '_n1x' [-Wunsequenced]
../inst/include/CImg.h:44923:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:44931:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:44941:22: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45125:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45133:18: warning: unsequenced modification and access to 'err' [-Wunsequenced]
../inst/include/CImg.h:45142:20: warning: unsequenced modification and access to 'err' [-Wunsequenced]
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/imager.Rcheck/00install.out’ for details.
checking installed package size ... NOTE
installed size is 11.1Mb
sub-directories of 1Mb or more:
data 1.4Mb
doc 3.4Mb
include 2.6Mb
libs 2.5Mb
IMP (1.1)
Maintainer: Anup Nair nairanup50695@gmail.com
0 errors | 0 warnings | 0 notes
imputeTestbench (3.0.0)
Maintainer: Marcus W. Beck mbafs2012@gmail.com Bug reports: https://github.com/neerajdhanraj/imputeTestbench/issues
0 errors | 0 warnings | 0 notes
incidence (1.0.0)
Maintainer: Thibaut Jombart thibautjombart@gmail.com Bug reports: http://github.com/reconhub/incidence/issues
0 errors | 0 warnings | 0 notes
inctools (1.0.7)
Maintainer: Eduard Grebe eduardgrebe@sun.ac.za Bug reports: https://github.com/SACEMA/inctools/issues
0 errors | 0 warnings | 0 notes
IncucyteDRC (0.5.4)
Maintainer: Phil Chapman phil.chapman@cruk.manchester.ac.uk Bug reports: https://github.com/chapmandu2/IncucyteDRC/issues
0 errors | 0 warnings | 0 notes
iNEXT (2.0.9)
Maintainer: T. C. Hsieh euler96@gmail.com Bug reports: https://github.com/JohnsonHsieh/iNEXT/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 416-424 (Introduction.Rmd)
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
invalid line type
Execution halted
Information (0.0.9)
Maintainer: Larsen Kim kblarsen4@gmail.com
0 errors | 0 warnings | 0 notes
InformationValue (1.2.3)
Maintainer: Selva Prabhakaran selva86@gmail.com Bug reports: https://github.com/selva86/InformationValue/issues License: GPL (>= 2)
0 errors | 0 warnings | 0 notes
InSilicoVA (1.1.2)
Maintainer: Zehang Li lizehang@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘InSilicoVA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/InSilicoVA.Rcheck/00install.out’ for details.
IntClust (0.0.2)
Maintainer: Marijke Van Moerbeke marijke.vanmoerbeke@uhasselt.be
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘a4Core’ ‘limma’
Packages suggested but not available for checking:
‘MLP’ ‘biomaRt’ ‘org.Hs.eg.db’ ‘a4Base’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
IntegratedJM (1.4)
Maintainer: Rudradev Sengupta rudradev.sengupta@uhasselt.be
0 errors | 0 warnings | 0 notes
IntegratedMRF (1.1.5)
Maintainer: Raziur Rahman razeeebuet@gmail.com
0 errors | 0 warnings | 0 notes
interplot (0.1.4)
Maintainer: Yue Hu yue-hu-1@uiowa.edu
0 errors | 0 warnings | 0 notes
intsvy (1.9)
Maintainer: Daniel Caro daniel.caro@education.ox.ac.uk Bug reports: https://github.com/eldafani/intsvy/issues
0 errors | 0 warnings | 0 notes
IPtoCountry (0.0.1)
Maintainer: Ronald E. Robertson robertson.ron@husky.neu.edu
0 errors | 0 warnings | 0 notes
ITEMAN (1.0)
Maintainer: Cengiz Zopluoglu c.zopluoglu@miami.edu
0 errors | 0 warnings | 0 notes
iWISA (1.0-2)
Maintainer: Wen Xiao wx5356a@student.american.edu
0 errors | 0 warnings | 0 notes
JacobiEigen (0.2-2)
Maintainer: Bill Venables Bill.Venables@gmail.com
0 errors | 0 warnings | 0 notes
JWileymisc (0.2.1)
Maintainer: Joshua F. Wiley jwiley.psych@gmail.com Bug reports: https://github.com/JWiley/JWileymisc/issues
0 errors | 0 warnings | 0 notes
kamila (0.1.1.1)
Maintainer: Alexander Foss alexanderhfoss@gmail.com Bug reports: https://github.com/ahfoss/kamila/issues
0 errors | 0 warnings | 0 notes
kdetrees (0.1.5)
Maintainer: Grady Weyenberg grady.weyenberg@uky.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
as.matrix.multiPhylo : tip2tip: no visible global function definition
for ‘cophenetic’
bw.nn : <anonymous>: no visible global function definition for
‘quantile’
dist.diss: no visible binding for global variable ‘median’
dist.diss: no visible global function definition for ‘dist’
hist.kdetrees: no visible binding for global variable ‘density’
kdetrees : cutoff: no visible global function definition for ‘quantile’
kdetrees.complete: no visible global function definition for ‘plot’
kdetrees.complete: no visible global function definition for ‘hist’
kdetrees.complete: no visible global function definition for
‘write.csv’
plot.kdetrees: no visible binding for global variable ‘density’
Undefined global functions or variables:
cophenetic density dist hist median plot quantile write.csv
Consider adding
importFrom("graphics", "hist", "plot")
importFrom("stats", "cophenetic", "density", "dist", "median",
"quantile")
importFrom("utils", "write.csv")
to your NAMESPACE file.
kfigr (1.2)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com Bug reports: https://github.com/mkoohafkan/kfigr/issues
0 errors | 0 warnings | 0 notes
Kmisc (0.5.0)
Maintainer: Kevin Ushey kevinushey@gmail.com Bug reports: https://github.com/kevinushey/Kmisc/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Rcpp_apply_generator: no visible global function definition for
‘packageVersion’
Rcpp_tapply_generator: no visible global function definition for
‘packageVersion’
anat: no visible global function definition for ‘capture.output’
anatomy: no visible global function definition for ‘capture.output’
bwplot2: no visible global function definition for ‘capture.output’
gradient: no visible global function definition for ‘colorRampPalette’
hImg: no visible global function definition for ‘par’
... 23 lines ...
anova capture.output coef colorRampPalette complete.cases dev.off
kmeans object.size packageVersion par qbeta read.table rgb svg
write.table
Consider adding
importFrom("grDevices", "colorRampPalette", "dev.off", "rgb", "svg")
importFrom("graphics", "par")
importFrom("stats", "anova", "coef", "complete.cases", "kmeans",
"qbeta")
importFrom("utils", "capture.output", "object.size", "packageVersion",
"read.table", "write.table")
to your NAMESPACE file.
knitrBootstrap (1.0.0)
Maintainer: Jim Hester james.f.hester@gmail.com Bug reports: https://github.com/jimhester/knitrBootstrap/issues
0 errors | 0 warnings | 0 notes
kobe (1.3.2)
Maintainer: Laurence Kell laurie.kell@iccat.int
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
getBSP: no visible global function definition for ‘read.csv’
io2box : <anonymous>: no visible global function definition for
‘quantile’
io2box : <anonymous>: no visible global function definition for
‘median’
ioAspic : <anonymous>: no visible global function definition for
‘quantile’
ioAspic : <anonymous>: no visible global function definition for
‘median’
... 55 lines ...
kobe,data.frame-missing : <anonymous>: no visible global function
definition for ‘kobeFn’
Undefined global functions or variables:
colorRampPalette grey kobe2smFn kobeFn median modifyList mtext par
quantile read.csv read.table
Consider adding
importFrom("grDevices", "colorRampPalette", "grey")
importFrom("graphics", "mtext", "par")
importFrom("stats", "median", "quantile")
importFrom("utils", "modifyList", "read.csv", "read.table")
to your NAMESPACE file.
KSD (1.0.0)
Maintainer: Min Hyung Kang Minhyung.Daniel.Kang@gmail.com
0 errors | 0 warnings | 0 notes
Lahman (5.0-0)
Maintainer: Chris Dalzell cdalzell@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.6Mb
sub-directories of 1Mb or more:
data 7.3Mb
LambertW (0.6.4)
Maintainer: Georg M. Goerg im@gmge.org
0 errors | 0 warnings | 0 notes
LANDD (1.1.0)
Maintainer: Shangzhao Qiu qsz1328@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘GOstats’ ‘GOSemSim’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
largeVis (0.1.9.1)
Maintainer: Amos Elberg amos.elberg@gmail.com Bug reports: https://github.com/elbamos/largeVis/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Quitting from lines 14-55 (benchmarks.Rmd)
Error: processing vignette 'benchmarks.Rmd' failed with diagnostics:
formal argument "legend.key.size" matched by multiple actual arguments
Execution halted
latex2exp (0.4.0)
Maintainer: Stefano Meschiari stefano.meschiari@gmail.com Bug reports: https://github.com/stefano-meschiari/latex2exp/issues
0 errors | 0 warnings | 0 notes
lda (1.4.2)
Maintainer: Jonathan Chang slycoder@gmail.com
0 errors | 0 warnings | 0 notes
ldatuning (0.2.0)
Maintainer: Murzintcev Nikita nikita@lreis.ac.cn Bug reports: https://github.com/nikita-moor/ldatuning/issues
0 errors | 0 warnings | 0 notes
LDheatmap (0.99-2)
Maintainer: Brad McNeney mcneney@sfu.ca
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘chopsticks’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
LEAP (0.2)
Maintainer: Alicia T. Specht aspecht2@nd.edu
0 errors | 0 warnings | 0 notes
learningCurve (1.0)
Maintainer: Jason Freels auburngrads@live.com
0 errors | 0 warnings | 0 notes
learnstats (0.1.1)
Maintainer: Daniel Walter dswalter@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
prob: no visible global function definition for ‘pnorm’
prob: no visible global function definition for ‘dnorm’
prob: no visible global function definition for ‘plot’
prob : <anonymous>: no visible global function definition for ‘dnorm’
prob: no visible global function definition for ‘axis’
prob: no visible global function definition for ‘polygon’
prob: no visible global function definition for ‘legend’
prob: no visible global function definition for ‘jpeg’
prob: no visible global function definition for ‘dev.off’
... 37 lines ...
axis dchisq dev.off dnorm dt hist jpeg legend mtext par pchisq pf
plot pnorm polygon pt qchisq qf qqline qqnorm qt rchisq rnorm rt
runif segments title
Consider adding
importFrom("grDevices", "dev.off", "jpeg")
importFrom("graphics", "axis", "hist", "legend", "mtext", "par",
"plot", "polygon", "segments", "title")
importFrom("stats", "dchisq", "dnorm", "dt", "pchisq", "pf", "pnorm",
"pt", "qchisq", "qf", "qqline", "qqnorm", "qt", "rchisq",
"rnorm", "rt", "runif")
to your NAMESPACE file.
LexisPlotR (0.3)
Maintainer: Philipp Ottolinger philipp@ottolinger.de
0 errors | 0 warnings | 0 notes
likeLTD (6.1.1)
Maintainer: Christopher Steele c.steele.11@ucl.ac.uk
0 errors | 0 warnings | 0 notes
likert (1.3.3)
Maintainer: Jason Bryer jason@bryer.org Bug reports: https://github.com/jbryer/likert/issues
0 errors | 0 warnings | 0 notes
linear.tools (1.3.0)
Maintainer: Fan Yang yfno1@msn.com
0 errors | 0 warnings | 0 notes
llama (0.9.1)
Maintainer: Lars Kotthoff larsko@cs.ubc.ca
1 error | 0 warnings | 0 notes
checking whether package ‘llama’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/llama.Rcheck/00install.out’ for details.
lme4 (1.1-12)
Maintainer: Ben Bolker bbolker+lme4@gmail.com Bug reports: https://github.com/lme4/lme4/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.8Mb
sub-directories of 1Mb or more:
doc 1.8Mb
testdata 1.5Mb
lmerTest (2.0-32)
Maintainer: Alexandra Kuznetsova alku@dtu.dk
0 errors | 0 warnings | 0 notes
lmms (1.3.3)
Maintainer: Jasmin Straube j.straube@qfab.org
0 errors | 0 warnings | 0 notes
localgauss (0.35)
Maintainer: Tore Selland Kleppe tore.kleppe@uis.no
1 error | 0 warnings | 0 notes
checking whether package ‘localgauss’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/localgauss.Rcheck/00install.out’ for details.
LocFDRPois (1.0.0)
Maintainer: Kris Sankaran kriss1@stanford.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
AnalyticalOptim: no visible global function definition for ‘optim’
LLConstructor : LL: no visible global function definition for ‘dpois’
MixtureDensity: no visible global function definition for ‘glm’
MixtureDensity : f_hat: no visible global function definition for
‘predict’
NullDensity : f0: no visible global function definition for ‘dpois’
Undefined global functions or variables:
dpois glm optim predict
Consider adding
importFrom("stats", "dpois", "glm", "optim", "predict")
to your NAMESPACE file.
logisticPCA (0.2)
Maintainer: Andrew J. Landgraf andland@gmail.com
0 errors | 0 warnings | 0 notes
LOGIT (1.3)
Maintainer: Rafael S. de Souza rafael.2706@gmail.com
0 errors | 0 warnings | 0 notes
lsbclust (1.0.4)
Maintainer: Pieter Schoonees schoonees@gmail.com
0 errors | 0 warnings | 0 notes
lsl (0.5.5)
Maintainer: Po-Hsien Huang psyphh@gmail.com
0 errors | 0 warnings | 0 notes
ltbayes (0.4)
Maintainer: Timothy R. Johnson trjohns@uidaho.edu
1 error | 0 warnings | 0 notes
checking whether package ‘ltbayes’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ltbayes.Rcheck/00install.out’ for details.
lvplot (0.2.0)
Maintainer: Hadley Wickham hadley@rstudio.com
0 errors | 0 warnings | 0 notes
MAc (1.1)
Maintainer: AC Del Re acdelre@gmail.com
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘R2wd’
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘R2wd’ ‘ggplot2’ ‘metafor’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
mareg.default print.icclist print.macat print.mareg print.omni
print.summary.mareg r2.mareg summary.mareg wd.default wd.macat
wd.mareg wd.omni
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
CatCompf: no visible global function definition for ‘aov’
CatCompf: no visible global function definition for ‘TukeyHSD’
CatCompf: no visible global function definition for ‘pchisq’
CatCompr: no visible global function definition for ‘aov’
CatCompr: no visible global function definition for ‘TukeyHSD’
CatCompr: no visible global function definition for ‘pchisq’
CatModGraph: no visible global function definition for ‘ggplot’
CatModGraph: no visible global function definition for ‘aes’
CatModGraph: no visible binding for global variable ‘z’
... 147 lines ...
geom_errorbarh geom_jitter geom_point geom_smooth geom_vline ggplot
id l.ci95 lm model.extract model.matrix model.response na.omit opts
pchisq pf pnorm printCoefmat qf qt r rma scale_y_continuous se.z
se.z.tau stat_abline stat_summary u.ci95 var var.g wdGet wdHeading
wdNewDoc wdTable wi wi.tau xlab xlim ylab ylim z
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov",
"contrasts", "lm", "model.extract", "model.matrix",
"model.response", "na.omit", "pchisq", "pf", "pnorm",
"printCoefmat", "qf", "qt", "var")
to your NAMESPACE file.
macleish (0.3.0)
Maintainer: Ben Baumer ben.baumer@gmail.com
0 errors | 0 warnings | 0 notes
MAd (0.8-2)
Maintainer: AC Del Re acdelre@gmail.com
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘R2wd’
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘R2wd’ ‘ggplot2’ ‘metafor’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
mareg.default print.icclist print.macat print.mareg print.omni
print.summary.mareg r2.mareg summary.mareg wd.default wd.macat
wd.mareg wd.omni
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
CatCompf: no visible global function definition for ‘aov’
CatCompf: no visible global function definition for ‘TukeyHSD’
CatCompf: no visible global function definition for ‘pchisq’
CatCompr: no visible global function definition for ‘aov’
CatCompr: no visible global function definition for ‘TukeyHSD’
CatCompr: no visible global function definition for ‘pchisq’
CatModf: no visible global function definition for ‘aggregate’
CatModf: no visible global function definition for ‘pnorm’
CatModf: no visible global function definition for ‘pchisq’
... 35 lines ...
robustSE: no visible global function definition for ‘qt’
Undefined global functions or variables:
TukeyHSD aggregate anova aov contrasts model.extract model.matrix
model.response na.omit pchisq pf pnorm printCoefmat pt qf qt
residuals var
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov",
"contrasts", "model.extract", "model.matrix",
"model.response", "na.omit", "pchisq", "pf", "pnorm",
"printCoefmat", "pt", "qf", "qt", "residuals", "var")
to your NAMESPACE file.
maddison (0.1)
Maintainer: Eric Persson expersso5@gmail.com
0 errors | 0 warnings | 0 notes
magick (0.3)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu Bug reports: https://github.com/ropensci/magick/issues
1 error | 0 warnings | 0 notes
checking whether package ‘magick’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/magick.Rcheck/00install.out’ for details.
manhattanly (0.1.0)
Maintainer: Sahir Bhatnagar sahir.bhatnagar@gmail.com Bug reports: https://github.com/sahirbhatnagar/manhattanly/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in arrange_impl(.data, dots) :
'.Random.seed' is not an integer vector but of type 'NULL', so ignored
Warning: 'scatter' objects don't have these attributes: 'evaluate'
Valid attributes include:
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: 'scatter' objects don't have these attributes: 'evaluate'
... 6 lines ...
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: 'scatter' objects don't have these attributes: 'evaluate'
Valid attributes include:
'type', 'visible', 'showlegend', 'legendgroup', 'opacity', 'name', 'uid', 'hoverinfo', 'stream', 'x', 'x0', 'dx', 'y', 'y0', 'dy', 'text', 'mode', 'hoveron', 'line', 'connectgaps', 'fill', 'fillcolor', 'marker', 'textposition', 'textfont', 'r', 't', 'error_y', 'error_x', 'xaxis', 'yaxis', 'xsrc', 'ysrc', 'textsrc', 'textpositionsrc', 'rsrc', 'tsrc', 'key'
Warning: Ignoring unknown aesthetics: text
Quitting from lines 104-105 (manhattanly.Rmd)
Error: processing vignette 'manhattanly.Rmd' failed with diagnostics:
attempt to apply non-function
Execution halted
mapr (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/mapr/issues
0 errors | 0 warnings | 0 notes
marked (1.1.11)
Maintainer: Jeff Laake Jeff.Laake@noaa.gov
0 errors | 0 warnings | 0 notes
marmap (0.9.5)
Maintainer: Eric Pante pante.eric@gmail.com
0 errors | 0 warnings | 0 notes
matrixStats (0.51.0)
Maintainer: Henrik Bengtsson henrikb@braju.com Bug reports: https://github.com/HenrikBengtsson/matrixStats/issues
0 errors | 0 warnings | 0 notes
MAVIS (1.1.2)
Maintainer: W. Kyle Hamilton kyle.hamilton@gmail.com
0 errors | 0 warnings | 0 notes
MaxentVariableSelection (1.0-2)
Maintainer: "Alexander Jueterbock" Alexander-Jueterbock@web.de
0 errors | 0 warnings | 0 notes
MCMC.OTU (1.0.10)
Maintainer: Mikhail V. Matz matz@utexas.edu
0 errors | 0 warnings | 0 notes
MCMC.qpcr (1.2.2)
Maintainer: Mikhail V. Matz matz@utexas.edu
0 errors | 0 warnings | 0 notes
mcprofile (0.2-3)
Maintainer: Daniel Gerhard 00gerhard@gmail.com
0 errors | 0 warnings | 0 notes
mdsr (0.1.3)
Maintainer: Ben Baumer ben.baumer@gmail.com Bug reports: https://github.com/beanumber/mdsr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
data 5.3Mb
medicalrisk (1.2)
Maintainer: Patrick McCormick patrick.mccormick@alum.mit.edu Bug reports: https://github.com/patrickmdnet/medicalrisk/issues
0 errors | 0 warnings | 0 notes
medicare (0.1.0)
Maintainer: Robert Gambrel robert.gambrel@gmail.com Bug reports: http://www.github.com/robertgambrel/medicare/issues
0 errors | 0 warnings | 0 notes
MEGENA (1.3.5-2)
Maintainer: Won-Min Song wonmin1984@gmail.com
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
The following object is masked from 'package:base':
union
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
... 8 lines ...
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Warning in vattrs[[name]][index] <- value :
number of items to replace is not a multiple of replacement length
Quitting from lines 119-127 (MEGENA_pipeline_10062016.Rmd)
Error: processing vignette 'MEGENA_pipeline_10062016.Rmd' failed with diagnostics:
formal argument "panel.background" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
plot_module: possible error in theme(panel.background =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), panel.background = element_rect(fill = "white",
colour = NA), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid.minor =
element_blank(), panel.grid.major = element_blank(), plot.title =
element_text(size = title.size), legend.position = "bottom",
legend.direction = "horizontal"): formal argument "panel.background"
matched by multiple actual arguments
... 7 lines ...
= "bottom", legend.direction = "horizontal"): formal argument
"panel.background" matched by multiple actual arguments
plot_subgraph: possible error in theme(panel.background =
element_blank(), axis.title.x = element_blank(), axis.title.y =
element_blank(), panel.background = element_rect(fill = "white",
colour = NA), axis.line = element_blank(), axis.ticks =
element_blank(), axis.text = element_blank(), panel.grid.minor =
element_blank(), panel.grid.major = element_blank(), plot.title =
element_text(size = title.size), legend.position = "bottom",
legend.direction = "horizontal"): formal argument "panel.background"
matched by multiple actual arguments
MendelianRandomization (0.2.0)
Maintainer: Stephen Burgess sb452@medschl.cam.ac.uk
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘MendelianRandomization-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mr_plot
> ### Title: Draw a scatter plot of the genetic associations and/or causal
> ### estimates
> ### Aliases: mr_plot mr_plot,MRAll-method mr_plot,MRInput-method
>
> ### ** Examples
>
> mr_plot(mr_input(bx = ldlc, bxse = ldlcse, by = chdlodds, byse = chdloddsse),
+ line="ivw")
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: mr_plot ... plotly_build.gg -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
MergeGUI (0.2-1)
Maintainer: Xiaoyue Cheng xycheng@iastate.edu
1 error | 0 warnings | 0 notes
checking whether package ‘MergeGUI’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/MergeGUI.Rcheck/00install.out’ for details.
merTools (0.2.1)
Maintainer: Jared E. Knowles jknowles@gmail.com Bug reports: https://www.github.com/jknowles/merTools
0 errors | 0 warnings | 0 notes
metacoder (0.1.2)
Maintainer: Zachary Foster zacharyfoster1989@gmail.com
0 errors | 0 warnings | 0 notes
metagen (1.0)
Maintainer: Thomas W. D. Möbius kontakt@thomasmoebius.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bcgVaccineData: no visible global function definition for ‘data’
bcgVaccineData: no visible global function definition for ‘qnorm’
hConfidence: no visible global function definition for ‘qchisq’
intervalEstimates_OneSgnf : crt: no visible global function definition
for ‘qt’
intervalEstimates_OneSgnf: no visible binding for global variable
‘qnorm’
metagenGeneralised: no visible binding for global variable ‘quantile’
performancePointH : property: no visible global function definition for
... 15 lines ...
renderSVG: no visible global function definition for ‘svg’
renderSVG: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
data dev.off pdf qchisq qnorm qt quantile rbinom rchisq rnorm svg
uniroot var
Consider adding
importFrom("grDevices", "dev.off", "pdf", "svg")
importFrom("stats", "qchisq", "qnorm", "qt", "quantile", "rbinom",
"rchisq", "rnorm", "uniroot", "var")
importFrom("utils", "data")
to your NAMESPACE file.
metaheur (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com
0 errors | 0 warnings | 0 notes
MetaIntegrator (1.0.3)
Maintainer: Winston A. Haynes hayneswa@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available:
‘multtest’ ‘preprocessCore’ ‘GEOquery’ ‘GEOmetadb’
Package suggested but not available for checking: ‘BiocStyle’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
metaMix (0.2)
Maintainer: Sofia Morfopoulou sofia.morfopoulou.10@ucl.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘Rmpi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
metaplotr (0.0.3)
Maintainer: Mehmet Gultas mehmetgultas@gmail.com
0 errors | 0 warnings | 0 notes
meteogRam (1.0)
Maintainer: Bogdan Bochenek bogdan.bochenek@uj.edu.pl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
crosssection: no visible global function definition for
‘colorRampPalette’
crosssection: no visible global function definition for
‘filled.contour’
crosssection: no visible global function definition for ‘axis’
crosssection: no visible global function definition for ‘par’
crosssection: no visible global function definition for ‘contour’
temperatures: no visible binding for global variable ‘time’
Undefined global functions or variables:
axis colorRampPalette contour filled.contour par time
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("graphics", "axis", "contour", "filled.contour", "par")
importFrom("stats", "time")
to your NAMESPACE file.
Methplot (1.0)
Maintainer: Xin Yang xin.yang@cimr.cam.ac.uk
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
getdata: no visible global function definition for ‘read.csv’
plotdata: no visible global function definition for ‘head’
Undefined global functions or variables:
head read.csv
Consider adding
importFrom("utils", "head", "read.csv")
to your NAMESPACE file.
metricsgraphics (0.9.0)
Maintainer: Bob Rudis bob@rudis.net Bug reports: https://github.com/hrbrmstr/metricsgraphics/issues
0 errors | 0 warnings | 0 notes
MGLM (0.0.7)
Maintainer: Yiwen Zhang yzhang31@ncsu.edu
0 errors | 0 warnings | 0 notes
mhtboot (1.3.3)
Maintainer: Abhirup Mallik malli066@umn.edu
0 errors | 0 warnings | 0 notes
microbenchmark (1.4-2.1)
Maintainer: Olaf Mersmann olafm@p-value.net
0 errors | 0 warnings | 1 note
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
micromap (1.9.2)
Maintainer: Tom Kincaid Kincaid.Tom@epa.gov
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CatMaps: no visible binding for global variable ‘poly’
RankMaps: no visible binding for global variable ‘poly’
RankMaps: no visible global function definition for ‘median’
alterForMedian: no visible binding for global variable ‘median’
assimilatePlot: no visible global function definition for ‘gray’
bar_build: no visible global function definition for ‘median’
bar_cl_build: no visible global function definition for ‘median’
box_summary_build: no visible global function definition for ‘median’
create_DF_rank: no visible global function definition for ‘aggregate’
... 15 lines ...
print.mm: no visible global function definition for ‘png’
print.mm: no visible global function definition for ‘postscript’
print.mm: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
aggregate dev.new dev.off gray jpeg median pdf png poly postscript
tiff
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "gray", "jpeg", "pdf",
"png", "postscript", "tiff")
importFrom("stats", "aggregate", "median", "poly")
to your NAMESPACE file.
microplot (1.0-14)
Maintainer: Richard M. Heiberger rmh@temple.edu
0 errors | 0 warnings | 0 notes
MiRAnorm (1.0.0)
Maintainer: Yuda Zhu yudazhu@gmail.com
0 errors | 0 warnings | 0 notes
miscset (1.0.0)
Maintainer: Sven E. Templer sven.templer@gmail.com Bug reports: https://github.com/setempler/miscset/issues
0 errors | 0 warnings | 0 notes
MissingDataGUI (0.2-5)
Maintainer: Xiaoyue Cheng xycheng@unomaha.edu
1 error | 0 warnings | 0 notes
checking whether package ‘MissingDataGUI’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/MissingDataGUI.Rcheck/00install.out’ for details.
mistat (1.0-4)
Maintainer: Daniele Amberti daniele.amberti@gmail.com
0 errors | 0 warnings | 1 note
checking top-level files ... NOTE
Non-standard file/directory found at top level:
‘README.html’
mistral (2.1.0)
Maintainer: Bertrand Iooss biooss@yahoo.fr
0 errors | 0 warnings | 0 notes
MIXFIM (1.0)
Maintainer: Marie-Karelle Riviere-Jourdan eldamjh@gmail.com
0 errors | 0 warnings | 0 notes
mixOmics (6.1.1)
Maintainer: Kim-Anh Le Cao k.lecao@uq.edu.au Bug reports: mixomics@math.univ-toulouse.fr or https://bitbucket.org/klecao/package-mixomics/issues
0 errors | 0 warnings | 0 notes
MixSIAR (3.1.7)
Maintainer: Brian Stock b1stock@ucsd.edu Bug reports: https://github.com/brianstock/MixSIAR/issues
2 errors | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘MixSIAR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mixsiar_gui
> ### Title: Run the GUI version of MixSIAR
> ### Aliases: mixsiar_gui
>
> ### ** Examples
... 6 lines ...
Error in mixsiar_gui() :
*** gWidgetsRGtk2 package not able to be loaded. ***
If 'library('gWidgetsRGtk2')' does not work, MixSIAR GUI will not run.
On Windows/Linux, try 'install.packages('gWidgetsRGtk2')'.
On Mac, close R, download and install GTK+ from:
http://r.research.att.com/#other. Then install latest X11 application
(xQuartz) from http://xquartz.macosforge.org/landing/.
If installing GTK+ continues to be problematic, consider using the
script version of MixSIAR. See manual for help and examples.
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
OK: 26 SKIPPED: 0 FAILED: 9
1. Error: Wolves ex works (@test_ex1_wolves.R#33)
2. Error: Geese ex works (@test_ex2_geese.R#27)
3. Error: Lake ex works (@test_ex3_lake.R#27)
4. Error: Palmyra ex works (@test_ex4_palmyra.R#27)
5. Error: Killer whale ex works (@test_ex5_killerwhale.R#28)
6. Error: Snail ex works (@test_ex6_snail.R#27)
7. Error: Storm-petrel ex works (@test_ex7_stormpetrel.R#27)
8. Error: Cladocera ex works (@test_ex8_cladocera.R#31)
9. Error: Isopod ex works (@test_ex9_isopod.R#27)
Error: testthat unit tests failed
Execution halted
mizer (0.2)
Maintainer: Finlay Scott finlay.scott@jrc.ec.europa.eu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
getFMort,MizerSim-missing: warning in get_time_elements(object,
time_range, slot = "effort"): partial argument match of 'slot' to
'slot_name'
getFMortGear,MizerSim-missing: warning in get_time_elements(object,
time_range, slot = "effort"): partial argument match of 'slot' to
'slot_name'
plotFMort,MizerSim: warning in scale_y_continuous(name = "Total fishing
mortality", lim = c(0, max(plot_dat$value))): partial argument match
of 'lim' to 'limits'
... 30 lines ...
plotYieldGear,MizerSim: no visible binding for global variable ‘time’
plotYieldGear,MizerSim: no visible binding for global variable ‘value’
plotYieldGear,MizerSim: no visible binding for global variable
‘Species’
plotYieldGear,MizerSim: no visible binding for global variable ‘gear’
Undefined global functions or variables:
Species combn gear lm time value w
Consider adding
importFrom("stats", "lm", "time")
importFrom("utils", "combn")
to your NAMESPACE file.
mkin (0.9.44)
Maintainer: Johannes Ranke jranke@uni-bremen.de Bug reports: http://github.com/jranke/mkin/issues
0 errors | 0 warnings | 0 notes
mlmc (1.0.0)
Maintainer: Louis Aslett aslett@stats.ox.ac.uk
0 errors | 0 warnings | 0 notes
mlr (2.9)
Maintainer: Bernd Bischl bernd_bischl@gmx.net Bug reports: https://github.com/mlr-org/mlr/issues
2 errors | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘mlr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotFilterValues
> ### Title: Plot filter values using ggplot2.
> ### Aliases: plotFilterValues
>
> ### ** Examples
>
> fv = generateFilterValuesData(iris.task, method = "chi.squared")
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
call: .jinit()
error: JNI_GetCreatedJavaVMs returned -1
Execution halted
** found \donttest examples: check also with --run-donttest
checking tests ... ERROR
Running the tests in ‘tests/run-base.R’ failed.
Last 13 lines of output:
1. Error: NoFeaturesModel works with FilterWrapper (@test_base_NoFeaturesModel.R#30)
2. Error: clustering performance (@test_base_clustering.R#15)
3. Error: clustering performance with missing clusters (@test_base_clustering.R#27)
4. Error: clustering resample (@test_base_clustering.R#41)
5. Error: clustering benchmark (@test_base_clustering.R#52)
6. Error: clustering tune (@test_base_clustering.R#65)
7. Error: filterFeatures (@test_base_filterFeatures.R#9)
8. Error: plotFilterValues (@test_base_filterFeatures.R#53)
9. Error: args are passed down to filter methods (@test_base_filterFeatures.R#87)
1. ...
Error: testthat unit tests failed
Execution halted
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘C50’ ‘GPfit’ ‘RRF’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Missing or unexported object: ‘irace::removeCandidatesMetaData’
mlxR (3.1.0)
Maintainer: Marc Lavielle Marc.Lavielle@inria.fr Bug reports: https://github.com/MarcLavielle/mlxR/issues
0 errors | 0 warnings | 0 notes
Mobilize (2.16-4)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bin.by.date: no visible binding for global variable ‘quantile’
bin.by.date: no visible global function definition for ‘na.omit’
biplot: no visible global function definition for ‘na.omit’
biplot.character: no visible global function definition for ‘runif’
biplot.character: no visible global function definition for ‘opts’
biplot.character: no visible global function definition for
‘theme_blank’
distributionplot: no visible global function definition for ‘na.omit’
distributionplot.character: no visible global function definition for
... 15 lines ...
timeplot.character: no visible global function definition for ‘rnorm’
timeplot.character: no visible binding for global variable ‘text’
userplot: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
head lines na.omit opts quantile rnorm runif text theme_blank
theme_text
Consider adding
importFrom("graphics", "lines", "text")
importFrom("stats", "na.omit", "quantile", "rnorm", "runif")
importFrom("utils", "head")
to your NAMESPACE file.
modelr (0.1.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/modelr/issues
0 errors | 0 warnings | 0 notes
Momocs (1.1.0)
Maintainer: Vincent Bonhomme bonhomme.vincent@gmail.com Bug reports: https://github.com/vbonhomme/Momocs/issues
0 errors | 0 warnings | 0 notes
moonBook (0.1.3)
Maintainer: Keon-Woong Moon cardiomoon@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
ORplot.sub: no visible global function definition for ‘par’
ORplot.sub: no visible global function definition for ‘plot’
ORplot.sub: no visible global function definition for ‘rect’
ORplot.sub: no visible global function definition for ‘abline’
ORplot.sub: no visible global function definition for ‘text’
ORplot.sub: no visible global function definition for ‘segments’
ORplot.sub: no visible global function definition for ‘points’
densityplot: no visible global function definition for ‘terms’
densityplot: no visible global function definition for ‘as.formula’
... 38 lines ...
Consider adding
importFrom("grDevices", "rainbow")
importFrom("graphics", "abline", "legend", "lines", "par", "plot",
"points", "rect", "segments", "text")
importFrom("stats", "IQR", "anova", "as.formula", "chisq.test", "coef",
"confint", "density", "fisher.test", "fivenum",
"kruskal.test", "lm", "mad", "median", "na.omit", "resid",
"sd", "shapiro.test", "t.test", "terms", "var.test",
"xtabs")
importFrom("utils", "write.csv", "write.table")
to your NAMESPACE file.
checking files in ‘vignettes’ ... NOTE
The following directory looks like a leftover from 'knitr':
‘figure’
Please remove from your package.
morse (2.2.0)
Maintainer: Philippe Veber philippe.veber@univ-lyon1.fr
1 error | 0 warnings | 0 notes
checking whether package ‘morse’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/morse.Rcheck/00install.out’ for details.
mosaic (0.14.4)
Maintainer: Randall Pruim rpruim@calvin.edu Bug reports: https://github.com/ProjectMOSAIC/mosaic/issues
0 errors | 0 warnings | 2 notes
checking installed package size ... NOTE
installed size is 9.4Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 6.8Mb
checking R code for possible problems ... NOTE
mMap: no visible binding for global variable ‘facet’
mScatter: no visible binding for global variable ‘facet’
mUniplot: no visible binding for global variable ‘facet’
Undefined global functions or variables:
facet
mosaicData (0.14.0)
Maintainer: Randall Pruim rpruim@calvin.edu
0 errors | 0 warnings | 0 notes
mousetrap (2.0.0)
Maintainer: Pascal J. Kieslich kieslich@psychologie.uni-mannheim.de Bug reports: https://github.com/pascalkieslich/mousetrap/issues
0 errors | 0 warnings | 0 notes
moveHMM (1.2)
Maintainer: Theo Michelot tmichelot1@sheffield.ac.uk
0 errors | 0 warnings | 0 notes
mplot (0.7.9)
Maintainer: Garth Tarr garth.tarr@gmail.com
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
mpoly (1.0.3)
Maintainer: David Kahle david.kahle@gmail.com Bug reports: https://github.com/dkahle/mpoly/issues
0 errors | 0 warnings | 0 notes
mrMLM (1.3)
Maintainer: Yuanming Zhangsoyzhang@mail.hzau.edu.cn
1 error | 0 warnings | 0 notes
checking whether package ‘mrMLM’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/mrMLM.Rcheck/00install.out’ for details.
MRMR (0.1.4)
Maintainer: Brian A. Fannin FanninQED@Yahoo.com
0 errors | 0 warnings | 0 notes
MSCMT (1.0.0)
Maintainer: Martin Becker martin.becker@mx.uni-saarland.de
0 errors | 0 warnings | 0 notes
MSG (0.3)
Maintainer: Yihui Xie xie@yihui.name Bug reports: https://github.com/yihui/MSG/issues
0 errors | 0 warnings | 0 notes
MSGARCH (0.17)
Maintainer: Keven Bluteau Keven.Bluteau@unine.ch
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
doc 2.5Mb
libs 4.1Mb
mtconnectR (1.0.1)
Maintainer: Subramanyam Ravishankar subramanyam@systeminsights.com
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Error: `mapped_plot` not equal to lazyLoadDBfetch(c(36596L, 320L), datafile, compressed, envhook).
Component "layers": Component 1: Component 3: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 3: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 7: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 7: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 9: Component 2: Modes of target, current: function, environment
Component "layers": Component 1: Component 9: Component 2: target, current do not match when deparsed
Component "layers": Component 1: Component 12: Modes of target, current: function, environment
Component "layers": Component 1: Component 12: target, current do not match when deparsed
Component "layers": Component 2: Component 3: Component 2: Modes of target, current: fun
testthat results ================================================================
OK: 0 SKIPPED: 0 FAILED: 0
Execution halted
MultiBD (0.2.0)
Maintainer: Marc A. Suchard msuchard@ucla.edu
0 errors | 0 warnings | 0 notes
multiDimBio (1.0.1)
Maintainer: Samuel V. Scarpino scarpino@utexas.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘pcaMethods’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
multilevelPSA (1.2.4)
Maintainer: Jason Bryer jason@bryer.org Bug reports: https://github.com/jbryer/multilevelPSA/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
missing.plot: possible error in theme(axis.text.x = element_text(size =
6, angle = -90, hjust = 0.5, vjust = 0.5), axis.text.x =
element_blank(), axis.ticks = element_blank()): formal argument
"axis.text.x" matched by multiple actual arguments
MultiMeta (0.1)
Maintainer: Dragana Vuckovic dragana.vuckovic@burlo.trieste.it
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
betas_plot: no visible global function definition for ‘cov2cor’
betas_plot: no visible global function definition for
‘colorRampPalette’
betas_plot: no visible global function definition for ‘pdf’
betas_plot: no visible global function definition for ‘dev.off’
mhplot: no visible global function definition for ‘read.table’
mhplot: no visible global function definition for ‘pdf’
mhplot: no visible global function definition for ‘plot’
mhplot: no visible global function definition for ‘points’
... 14 lines ...
qqplotter: no visible global function definition for ‘abline’
qqplotter: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
abline axis colorRampPalette cov2cor dev.off median pchisq pdf plot
points ppoints qchisq read.table write.table
Consider adding
importFrom("grDevices", "colorRampPalette", "dev.off", "pdf")
importFrom("graphics", "abline", "axis", "plot", "points")
importFrom("stats", "cov2cor", "median", "pchisq", "ppoints", "qchisq")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
multipanelfigure (0.8.3)
Maintainer: Johannes Graumann jog2030@qatar-med.cornell.edu
0 errors | 0 warnings | 0 notes
munsell (0.4.3)
Maintainer: Charlotte Wickham cwickham@gmail.com
0 errors | 0 warnings | 0 notes
musica (0.1.3)
Maintainer: Martin Hanel hanel@fzp.czu.cz
0 errors | 0 warnings | 0 notes
mvdalab (1.1)
Maintainer: Nelson Lee Afanador nelson.afanador@mvdalab.com
0 errors | 0 warnings | 0 notes
mvtboost (0.5.0)
Maintainer: Patrick Miller patrick.mil10@gmail.com Bug reports: https://github.com/patr1ckm/mvtboost/issues
0 errors | 0 warnings | 0 notes
mwaved (1.1.4)
Maintainer: Justin Rory Wishart justin.wishart@mq.edu.au Bug reports: https://github.com/jrwishart/mwaved/issues
1 error | 0 warnings | 0 notes
checking whether package ‘mwaved’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/mwaved.Rcheck/00install.out’ for details.
myTAI (0.4.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk Bug reports: https://github.com/HajkD/myTAI/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘edgeR’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ncappc (0.2.1.1)
Maintainer: Chayan Acharya chayan.acharya@farmbio.uu.se
0 errors | 0 warnings | 0 notes
NeatMap (0.3.6.2)
Maintainer: Satwik Rajaram satwik@gmail.com
0 errors | 0 warnings | 2 notes
checking R code for possible problems ... NOTE
data.reduction: no visible global function definition for ‘prcomp’
data.reduction: no visible global function definition for ‘hclust’
data.reduction: no visible global function definition for ‘as.dist’
data.reduction: no visible global function definition for ‘cor’
data.reduction: no visible global function definition for ‘dist’
heatmap1: no visible global function definition for ‘sd’
lineplot: no visible global function definition for ‘sd’
normalize: no visible global function definition for ‘sd’
profileplot3d : ColorFunction: no visible global function definition
for ‘rgb’
profileplot3d : ColorFunction: no visible global function definition
for ‘colorRamp’
profileplot3d: no visible global function definition for ‘sd’
profileplot3d: no visible global function definition for ‘gray’
Undefined global functions or variables:
as.dist colorRamp cor dist gray hclust prcomp rgb sd
Consider adding
importFrom("grDevices", "colorRamp", "gray", "rgb")
importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
to your NAMESPACE file.
checking compiled code ... NOTE
File ‘NeatMap/libs/NeatMap.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘nMDS_R.o’
Found ‘_srand’, possibly from ‘srand’ (C)
Object: ‘nMDS_R.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
netgen (1.3)
Maintainer: Jakob Bossek j.bossek@gmail.com Bug reports: https://github.com/jakobbossek/netgen/issues
0 errors | 0 warnings | 0 notes
networkreporting (0.1.1)
Maintainer: Dennis M. Feehan feehan@berkeley.edu
0 errors | 0 warnings | 0 notes
NeuralNetTools (1.4.0)
Maintainer: Marcus W. Beck mbafs2012@gmail.com Bug reports: https://github.com/fawda123/NeuralNetTools/issues
0 errors | 0 warnings | 0 notes
neuropsychology (0.2.4)
Maintainer: Dominique Makowski dom.makowski@gmail.com
0 errors | 0 warnings | 0 notes
NFP (0.99.1)
Maintainer: Yang Cao yiluheihei@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘KEGGgraph’
Packages suggested but not available for checking:
‘BiocStyle’ ‘graphite’ ‘NFPdata’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
nhstplot (1.0.0)
Maintainer: Nils Myszkowski nmyszkowski@pace.edu
0 errors | 0 warnings | 0 notes
nima (0.3.0)
Maintainer: Nima Hejazi nhejazi@berkeley.edu
0 errors | 0 warnings | 0 notes
nimble (0.6-1)
Maintainer: Christopher Paciorek paciorek@stat.berkeley.edu
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 11.9Mb
sub-directories of 1Mb or more:
CppCode 3.6Mb
R 2.3Mb
classic-bugs 1.5Mb
include 3.7Mb
nlstimedist (1.0.1)
Maintainer: Nathan Eastwood nathan.eastwood@icloud.com Bug reports: https://github.com/PlymouthUniversitySD/nlstimedist/issues
0 errors | 0 warnings | 0 notes
NlsyLinks (2.0.6)
Maintainer: Will Beasley wibeasley@hotmail.com Bug reports: https://github.com/LiveOak/NlsyLinks/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.5Mb
sub-directories of 1Mb or more:
data 4.3Mb
reports 2.2Mb
nLTT (1.3.1)
Maintainer: Thijs Janzen thijsjanzen@gmail.com Bug reports: https://github.com/richelbilderbeek/nLTT/issues
0 errors | 0 warnings | 0 notes
NMF (0.20.6)
Maintainer: Renaud Gaujoux renaud@tx.technion.ac.il Bug reports: http://github.com/renozao/NMF/issues
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘RcppOctave’ ‘doMPI’
checking R code for possible problems ... NOTE
algorithm,NMFStrategyOctave: no visible global function definition for
‘fstop’
evar,ANY: no visible binding for global variable ‘Biobase’
nmf,matrix-numeric-NMFStrategy : run.all: no visible binding for global
variable ‘n’
nmf,matrix-numeric-NMFStrategy : run.all: no visible binding for global
variable ‘RNGobj’
rss,matrix: no visible binding for global variable ‘Biobase’
Undefined global functions or variables:
Biobase RNGobj fstop n
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘RcppOctave’
NNTbiomarker (0.29.11)
Maintainer: Roger Day day01@pitt.edu
0 errors | 0 warnings | 0 notes
NORRRM (1.0.0)
Maintainer: Renee Gonzalez Guzman rguzman@cicese.edu.mx
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CIPW: no visible global function definition for ‘data’
CIPW: no visible binding for global variable ‘AtomWeight’
CIPW: no visible binding for global variable ‘MinWeight’
CIPW: no visible binding for global variable ‘OxiWeight’
CIPW.trace: no visible global function definition for ‘data’
CIPW.trace: no visible binding for global variable ‘AtomWeight’
CIPW.trace: no visible binding for global variable ‘MinWeight’
CIPW.trace: no visible binding for global variable ‘OxiWeight’
Undefined global functions or variables:
AtomWeight MinWeight OxiWeight data
Consider adding
importFrom("utils", "data")
to your NAMESPACE file.
nparACT (0.6)
Maintainer: Christine Blume christine.blume@sbg.ac.at
0 errors | 0 warnings | 0 notes
NPflow (0.10.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu Bug reports: https://github.com/borishejblum/NPflow/issues
0 errors | 0 warnings | 0 notes
npregfast (1.3.0)
Maintainer: Marta Sestelo sestelo@uvigo.es Bug reports: http://github.com/sestelo/npregfast/issues
1 error | 0 warnings | 0 notes
checking whether package ‘npregfast’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/npregfast.Rcheck/00install.out’ for details.
nullabor (0.3.1)
Maintainer: Di Cook dicook@iastate.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
box_dist: no visible global function definition for ‘quantile’
calc_mean_dist: no visible global function definition for ‘filter’
n: no visible global function definition for ‘resid’
null_dist : <anonymous>: no visible global function definition for
‘coef’
null_lm : <anonymous>: no visible global function definition for
‘predict’
reg_dist: no visible global function definition for ‘coef’
reg_dist: no visible global function definition for ‘lm’
... 10 lines ...
sep_dist: no visible global function definition for ‘cutree’
sep_dist: no visible global function definition for ‘hclust’
uni_dist: no visible global function definition for ‘sd’
Undefined global functions or variables:
coef cutree dist filter hclust lm predict quantile rbinom resid rnorm
sd update
Consider adding
importFrom("stats", "coef", "cutree", "dist", "filter", "hclust", "lm",
"predict", "quantile", "rbinom", "resid", "rnorm", "sd",
"update")
to your NAMESPACE file.
nzelect (0.2.0)
Maintainer: Peter Ellis peter.ellis2013nz@gmail.com
0 errors | 0 warnings | 0 notes
oapackage (2.0.23)
Maintainer: Pieter Thijs Eendebak pieter.eendebak@gmail.com
0 errors | 0 warnings | 0 notes
oaPlots (0.0.25)
Maintainer: Jason Waddell jason.waddell@openanalytics.eu
0 errors | 0 warnings | 0 notes
oaxaca (0.1.3)
Maintainer: Marek Hlavac hlavac@fas.harvard.edu
0 errors | 0 warnings | 0 notes
obAnalytics (0.1.0)
Maintainer: Philip Stubbings phil@parasec.net Bug reports: https://github.com/phil8192/ob-analytics/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘obAnalytics-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotVolumePercentiles
> ### Title: Visualise available limit order book liquidity through time.
> ### Aliases: plotVolumePercentiles
>
> ### ** Examples
... 10 lines ...
plotVolumePercentiles => time range = 7200 secs
plotVolumePercentiles => aggregating to mins intervals
plotVolumePercentiles => aggregation: 2015-05-01 02:29:00 : 2015-05-01 04:29:00 by = mins
Warning: Ignoring unknown aesthetics: ymax
Warning: Ignoring unknown aesthetics: ymax
Warning in rep(yes, length.out = length(ans)) :
'x' is NULL so the result will be NULL
Error in ifelse(data$ymax == 0, data$ymin, data$ymax) :
replacement has length zero
Calls: <Anonymous> ... f -> <Anonymous> -> f -> <Anonymous> -> f -> ifelse
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 535-541 (guide.Rmd)
Error: processing vignette 'guide.Rmd' failed with diagnostics:
replacement has length zero
Execution halted
oddsratio (0.3.0)
Maintainer: Patrick Schratz patrick.schratz@gmail.com Bug reports: https://github.com/pat-s/oddsratio/issues
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘oddsratio-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add.oddsratio.into.plot
> ### Title: Insert odds ratios of GAM(M)s into smoothing function
> ### Aliases: add.oddsratio.into.plot
>
> ### ** Examples
... 36 lines ...
+ values = c(0.4, 0.6))
>
> # add or.object2 into plot
> add.oddsratio.into.plot(plot.object, or.object2, or.yloc = 2.1, values.yloc = 2,
+ line.col = "green4", text.col = "black",
+ rect.col = "green4", rect.alpha = 0.2,
+ line.alpha = 1, line.type = "dashed",
+ arrow.xloc.r = 0.01, arrow.xloc.l = -0.01,
+ arrow.length = 0.01, rect = TRUE)
Error: Aesthetics must be either length 1 or the same as the data (1): xmin, xmax, ymin, ymax, fill, alpha
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 130-139 (function.tutorial.Rmd)
Error: processing vignette 'function.tutorial.Rmd' failed with diagnostics:
Aesthetics must be either length 1 or the same as the data (1): xmin, xmax, ymin, ymax, fill, alpha
Execution halted
OECD (0.2.2)
Maintainer: Eric Persson expersso5@gmail.com Bug reports: https://www.github.com/expersso/OECD/issues
0 errors | 0 warnings | 0 notes
onlineCPD (1.0)
Maintainer: Zachary Zanussi zachary9506@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘onlineCPD-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: findCP
> ### Title: Wisely Pick Changepoints
> ### Aliases: findCP
>
> ### ** Examples
>
> ## Two changepoints within \code{buffer} points:
> set.seed(5)
> y <- c(rnorm(15,0.5,0.01),0.505,0.51,0.015,0.52,rnorm(15,0.6,0.05))
> res <- offlineCPD(y)
> plot(res,buffer=10) ## Will replace the two changepoints
Error: Aesthetics must be either length 1 or the same as the data (1): x, y, xend, yend, alpha
Execution halted
OpasnetUtils (1.2.0)
Maintainer: Teemu Rintala teemu.rintala.a@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ComputeDependencies: no visible global function definition for ‘find’
Fetch: no visible global function definition for ‘find’
Q0.025: no visible global function definition for ‘quantile’
Q0.975: no visible global function definition for ‘quantile’
interpf: no visible global function definition for ‘qnorm’
interpf: no visible global function definition for ‘rnorm’
interpf: no visible global function definition for ‘runif’
oapply: no visible global function definition for ‘aggregate’
odebug: no visible global function definition for ‘combn’
... 8 lines ...
‘URLencode’
rdirichlet: no visible global function definition for ‘rgamma’
tidy: no visible global function definition for ‘reshape’
Undefined global functions or variables:
URLencode aggregate aov as.formula combn find qnorm quantile
read.table reshape rgamma rnorm runif
Consider adding
importFrom("stats", "aggregate", "aov", "as.formula", "qnorm",
"quantile", "reshape", "rgamma", "rnorm", "runif")
importFrom("utils", "URLencode", "combn", "find", "read.table")
to your NAMESPACE file.
OpenStreetMap (0.3.3)
Maintainer: Ian Fellows ian@fellstat.com
1 error | 0 warnings | 0 notes
checking whether package ‘OpenStreetMap’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/OpenStreetMap.Rcheck/00install.out’ for details.
openVA (1.0.1)
Maintainer: Zehang Li lizehang@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘openVA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/openVA.Rcheck/00install.out’ for details.
optiRum (0.37.3)
Maintainer: Stephanie Locke stephanie.g.locke@gmail.com Bug reports: https://github.com/stephlocke/optiRum/issues
0 errors | 0 warnings | 0 notes
orderedLasso (1.7)
Maintainer: Xiaotong Suo xiaotong@stanford.edu
0 errors | 0 warnings | 2 notes
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
predict.orderedLasso predict.orderedLasso.path predict.timeLagLasso
predict.timeLagLasso.path
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
error.bars: no visible global function definition for ‘segments’
lambda.interp: no visible global function definition for ‘approx’
orderedLasso: no visible binding for global variable ‘sd’
orderedLasso.cv: no visible binding for global variable ‘var’
plot.orderedLasso.cv: no visible global function definition for ‘par’
plot.orderedLasso.cv: no visible global function definition for ‘plot’
plot.orderedLasso.cv: no visible global function definition for ‘axis’
plot.orderedLasso.cv: no visible global function definition for ‘mtext’
plot.orderedLasso.cv: no visible global function definition for
... 12 lines ...
timeLagLasso: no visible binding for global variable ‘sd’
timeLagLasso.cv: no visible binding for global variable ‘sd’
timeLagLasso.cv: no visible binding for global variable ‘var’
timeLagLasso.path: no visible binding for global variable ‘sd’
Undefined global functions or variables:
abline approx axis mtext par plot points sd segments var
Consider adding
importFrom("graphics", "abline", "axis", "mtext", "par", "plot",
"points", "segments")
importFrom("stats", "approx", "sd", "var")
to your NAMESPACE file.
orgR (0.9.0)
Maintainer: Yi Tang yi.tang.uk@me.com
0 errors | 0 warnings | 0 notes
OriGen (1.4.3)
Maintainer: John Michael O. Ranola ranolaj@uw.edu
1 error | 0 warnings | 0 notes
checking whether package ‘OriGen’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/OriGen.Rcheck/00install.out’ for details.
osmplotr (0.2.3)
Maintainer: Mark Padgham mark.padgham@email.com Bug reports: https://github.com/ropenscilabs/osmplotr/issues
0 errors | 0 warnings | 0 notes
OutbreakTools (0.1-14)
Maintainer: Thibaut Jombart thibautjombart@gmail.com
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘OutbreakTools-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ToyOutbreakRaw
> ### Title: Raw simulated outbreak dataset
> ### Aliases: ToyOutbreakRaw
> ### Keywords: dataset
>
... 572 lines ...
> plot(get.contacts(x, from=2, to=2.1), main="Contact network - day 2",
+ displaylabels=TRUE)
> plot(get.contacts(x, from=3, to=3.1), main="Contact network - day 3",
+ displaylabels=TRUE)
>
> ## Mapping the outbreak (by sex) ##
> plot(x,'geo',location=c('lon','lat'),zoom=13,colorBy='Sex')
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=51.516439,-0.171146&zoom=13&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Error: GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in .local(x, ...) :
The following sequence IDs are not in the dataset: 311, 222
Warning in .local(x, ...) :
The following sequence IDs are not in the dataset: 311, 222
Warning in (if (out_format(c("latex", "sweave", "listings"))) sanitize_fn else paste0)(path, :
replaced special characters in figure filename "figs/OutbreakTools-out.width==".8\\textwidth"" -> "figs/OutbreakTools-out.width___.8\\textwidth_"
Warning in (if (out_format(c("latex", "sweave", "listings"))) sanitize_fn else paste0)(path, :
dots in figure paths replaced with _ ("figs/OutbreakTools-out_width____8//textwidth_")
Warning: The shape palette can deal with a maximum of 6 discrete values because
more than 6 becomes difficult to discriminate; you have 11. Consider
specifying shapes manually if you must have them.
Warning: Removed 58 rows containing missing values (geom_point).
Warning: `show_guide` has been deprecated. Please use `show.legend` instead.
Warning: `show_guide` has been deprecated. Please use `show.legend` instead.
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=51.516439,-0.171146&zoom=14&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Quitting from lines 1022-1023 (OutbreakTools.Rnw)
Error: processing vignette 'OutbreakTools.Rnw' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
P2C2M (0.7.6)
Maintainer: Michael Gruenstaeudl mi.gruenstaeudl@gmail.com
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘genealogicalSorting’ ‘phybase’ ‘Rmpi’
checking R code for possible problems ... NOTE
ms.exec: no visible global function definition for ‘tail’
p2c2m.readstarb: no visible global function definition for ‘head’
p2c2m.readstarb: no visible binding for global variable ‘head’
rmOutlrs: no visible global function definition for ‘boxplot.stats’
rmext: no visible global function definition for ‘tail’
rowMedians: no visible binding for global variable ‘median’
stats.acrGenes: no visible binding for global variable ‘sd’
stats.perGene: no visible binding for global variable ‘sd’
statshelpers.cv: no visible binding for global variable ‘sd’
statshelpers.qntls: no visible binding for global variable ‘quantile’
Undefined global functions or variables:
boxplot.stats head median quantile sd tail
Consider adding
importFrom("grDevices", "boxplot.stats")
importFrom("stats", "median", "quantile", "sd")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
pa (1.2-1)
Maintainer: Yang Lu yang.lu2014@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘grid’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.formula.make: no visible global function definition for ‘formula’
regress: no visible global function definition for ‘lm’
regress: no visible global function definition for ‘model.matrix’
Undefined global functions or variables:
formula lm model.matrix
Consider adding
importFrom("stats", "formula", "lm", "model.matrix")
to your NAMESPACE file.
packcircles (0.1.1)
Maintainer: Michael Bedward michael.bedward@gmail.com
0 errors | 0 warnings | 0 notes
pagenum (1.0)
Maintainer: Kevin Wright kw.stat@gmail.com Bug reports: https://github.com/kwstat/pagenum/issues
0 errors | 0 warnings | 0 notes
PairedData (1.0.1)
Maintainer: Stephane Champely champely@univ-lyon1.fr
0 errors | 0 warnings | 4 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘MASS’ ‘gld’ ‘mvtnorm’
Please remove these calls from your code.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
bonettseier.var.test.default bonettseier.var.test.paired
grambsch.var.test.default grambsch.var.test.paired
imam.var.test.default imam.var.test.paired levene.var.test.default
levene.var.test.paired mcculloch.var.test.default
mcculloch.var.test.paired sandvikolsson.var.test.default
sandvikolsson.var.test.paired t.test.paired t.test.paired
var.test.default var.test.paired wilcox.test.paired
winsor.cor.test.default winsor.cor.test.paired yuen.t.test.default
yuen.t.test.formula yuen.t.test.paired
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
bonettseier.var.test.default: no visible global function definition for
‘complete.cases’
bonettseier.var.test.default: no visible global function definition for
‘median’
bonettseier.var.test.default: no visible global function definition for
‘sd’
bonettseier.var.test.default: no visible global function definition for
‘cor’
bonettseier.var.test.default: no visible global function definition for
... 72 lines ...
summary,paired: no visible global function definition for ‘cor’
Undefined global functions or variables:
IQR complete.cases cor cor.test dnorm integrate mad median pchisq pf
pnorm pt qchisq qf qnorm qt rbinom reorder sd t.test terms var
wilcox.test
Consider adding
importFrom("stats", "IQR", "complete.cases", "cor", "cor.test",
"dnorm", "integrate", "mad", "median", "pchisq", "pf",
"pnorm", "pt", "qchisq", "qf", "qnorm", "qt", "rbinom",
"reorder", "sd", "t.test", "terms", "var", "wilcox.test")
to your NAMESPACE file.
checking Rd line widths ... NOTE
Rd file 'mcculloch.var.test.Rd':
\usage lines wider than 90 characters:
alternative = c("two.sided", "less", "greater"),method= c("spearman","pearson", "kendall"),
Rd file 'plot.Rd':
\usage lines wider than 90 characters:
plot(x, groups=NULL,subjects=NULL, facet=TRUE,type=c("correlation","BA","McNeil","profile"),...)
These lines will be truncated in the PDF manual.
paleofire (1.1.9)
Maintainer: Olivier Blarquez blarquez@gmail.com
0 errors | 0 warnings | 0 notes
palettetown (0.1.1)
Maintainer: Tim Lucas timcdlucas@gmail.com
0 errors | 0 warnings | 0 notes
pAnalysis (2.0)
Maintainer: Joseph G Kreke jkreke2@gmail.com
0 errors | 0 warnings | 0 notes
pander (0.6.0)
Maintainer: Gergely Daróczi daroczig@rapporter.net Bug reports: https://github.com/rapporter/pander/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: Hmisc
Quitting from lines 13-18 (pander.Rmd)
Error: processing vignette 'pander.Rmd' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
checking dependencies in R code ... NOTE
Missing or unexported object: ‘rms::reVector’
ParallelTree (0.1.1)
Maintainer: Patrick O'Keefe patrick.okeefe@vanderbilt.edu
0 errors | 0 warnings | 0 notes
ParamHelpers (1.9)
Maintainer: Bernd Bischl bernd_bischl@gmx.net Bug reports: https://github.com/berndbischl/ParamHelpers/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
3. Failure: convertParamSetToIrace work with vecparam (@test_convertParamSetToIrace.R#85)
b$b not equal to c("v", "w").
target is NULL, current is character
testthat results ================================================================
OK: 1003 SKIPPED: 0 FAILED: 3
1. Error: convertParamSetToIrace (@test_convertParamSetToIrace.R#32)
2. Failure: convertParamSetToIrace uses correct boundaries (@test_convertParamSetToIrace.R#69)
3. Failure: convertParamSetToIrace work with vecparam (@test_convertParamSetToIrace.R#85)
Error: testthat unit tests failed
Execution halted
partialAR (1.0.5)
Maintainer: Matthew Clegg matthewcleggphd@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
estimate.rho.par: no visible global function definition for ‘var’
estimate.sigma.par: no visible global function definition for ‘sd’
estimate.sigma.par: no visible global function definition for ‘var’
fit.par: no visible global function definition for ‘sd’
fit.par.both: no visible global function definition for ‘sd’
fit.par.both: no visible global function definition for ‘median’
fit.par.both: no visible global function definition for ‘optim’
fit.par.both: no visible global function definition for ‘nlm’
fit.par.mr: no visible global function definition for ‘sd’
... 42 lines ...
‘is’
Undefined global functions or variables:
approx is median nlm optim optimize qchisq quantile read.table rnorm
rt sd var write.table
Consider adding
importFrom("methods", "is")
importFrom("stats", "approx", "median", "nlm", "optim", "optimize",
"qchisq", "quantile", "rnorm", "rt", "sd", "var")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
PASenseWear (1.0)
Maintainer: Yukun Zhang yukzhang@ucalgary.ca
0 errors | 0 warnings | 0 notes
PASWR2 (1.0.2)
Maintainer: Alan T. Arnholt arnholtat@appstate.edu
0 errors | 0 warnings | 0 notes
patPRO (1.1.0)
Maintainer: Geoffrey D Hannigan ghanni@upenn.edu
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Checking should be performed on sources prepared by ‘R CMD build’.
pauwels2014 (1.0)
Maintainer: Edouard Pauwels pauwelsed@gmail.com
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
add_noise: no visible global function definition for ‘rnorm’
estimate_risk_dream6 : <anonymous>: no visible global function
definition for ‘var’
generate_sample: no visible global function definition for ‘rnorm’
generate_sample: no visible global function definition for ‘runif’
sample_function: no visible global function definition for ‘runif’
sample_function : <anonymous>: no visible global function definition
for ‘var’
sample_function_multi_mod_weight: no visible global function definition
for ‘runif’
sample_function_multi_mod_weight : <anonymous>: no visible global
function definition for ‘var’
sample_function_single_mod: no visible global function definition for
‘runif’
Undefined global functions or variables:
rnorm runif var
Consider adding
importFrom("stats", "rnorm", "runif", "var")
to your NAMESPACE file.
PAWL (0.5)
Maintainer: Pierre Jacob pierre.jacob.work@gmail.com
0 errors | 0 warnings | 4 notes
checking whether the namespace can be loaded with stated dependencies ... NOTE
Warning: no function found corresponding to methods exports from ‘PAWL’ for: ‘show’
A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘foreach’ ‘ggplot2’ ‘reshape’
Please remove these calls from your code.
Packages in Depends field not imported from:
‘foreach’ ‘ggplot2’ ‘methods’ ‘mvtnorm’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
ConvertResults: no visible global function definition for ‘%do%’
ConvertResults: no visible global function definition for ‘foreach’
PlotAllVar: no visible global function definition for ‘melt’
PlotAllVar: no visible global function definition for ‘ggplot’
PlotAllVar: no visible global function definition for ‘aes’
PlotAllVar: no visible global function definition for ‘geom_line’
PlotAllVar: no visible global function definition for ‘facet_wrap’
PlotAllVar: no visible global function definition for ‘theme’
PlotAllVar: no visible global function definition for ‘element_text’
... 74 lines ...
geom_density2d geom_line geom_point geom_step geom_vline ggplot hist
labs mahalanobis melt new quantile rgamma rmultinom rmvnorm rnorm
runif stat_bin2d tail theme xlab ylab ylim
Consider adding
importFrom("graphics", "abline", "hist")
importFrom("methods", "new")
importFrom("stats", "cov", "mahalanobis", "quantile", "rgamma",
"rmultinom", "rnorm", "runif")
importFrom("utils", "tail")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
checking Rd line widths ... NOTE
Rd file 'createAdaptiveRandomWalkProposal.Rd':
\usage lines wider than 90 characters:
createAdaptiveRandomWalkProposal(nchains, targetdimension, adaptiveproposal, adaptationrate, sigma_init)
These lines will be truncated in the PDF manual.
PBImisc (1.0)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com
0 errors | 0 warnings | 0 notes
pcadapt (3.0.3)
Maintainer: Keurcien Luu keurcien.luu@imag.fr
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘qvalue’
pcaPA (2.0.2)
Maintainer: Carlos A. Arias caariasr22@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘pcaPA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/pcaPA.Rcheck/00install.out’ for details.
pcrcoal (1.2.0)
Maintainer: Botond Sipos sbotond@gmail.com
0 errors | 0 warnings | 0 notes
pcrsim (1.0.1)
Maintainer: Oskar Hansson oskar.hansson@fhi.no Bug reports: https://github.com/OskarHansson/pcrsim/issues
1 error | 0 warnings | 0 notes
checking whether package ‘pcrsim’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/pcrsim.Rcheck/00install.out’ for details.
PDQutils (0.1.5)
Maintainer: Steven E. Pav shabbychef@gmail.com Bug reports: https://github.com/shabbychef/PDQutils/issues
0 errors | 0 warnings | 0 notes
PedCNV (0.1)
Maintainer: Meiling Liu meiling.sta@gmail.com
0 errors | 0 warnings | 3 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘Rcpp’ ‘RcppArmadillo’ ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
AssoTestProc: no visible global function definition for ‘rbinom’
AssoTestProc: no visible global function definition for ‘princomp’
AssoTestProc: no visible global function definition for ‘loadings’
AssoTestProc: no visible global function definition for ‘lm’
CNVtypeAnay: no visible global function definition for ‘cov’
ClusProc: no visible global function definition for ‘princomp’
ClusProc: no visible global function definition for ‘prcomp’
ClusProc0: no visible global function definition for ‘kmeans’
ClusProc0: no visible global function definition for ‘cov’
... 12 lines ...
plot.clust: no visible global function definition for ‘title’
plot.clust: no visible global function definition for ‘mtext’
plot.clust: no visible global function definition for ‘text’
Undefined global functions or variables:
aes_string barplot cor cov geom_histogram kmeans lm loadings mtext
pchisq prcomp princomp qplot rbinom text title var
Consider adding
importFrom("graphics", "barplot", "mtext", "text", "title")
importFrom("stats", "cor", "cov", "kmeans", "lm", "loadings", "pchisq",
"prcomp", "princomp", "rbinom", "var")
to your NAMESPACE file.
pems.utils (0.2.17.8)
Maintainer: Karl Ropkins k.ropkins@its.leeds.ac.uk
0 errors | 0 warnings | 0 notes
peptider (0.2.2)
Maintainer: Eric Hare erichare@iastate.edu Bug reports: https://github.com/heike/peptider/issues
0 errors | 0 warnings | 0 notes
pequod (0.0-5)
Maintainer: Alberto Mirisola alberto.mirisola@gmail.com
0 errors | 0 warnings | 0 notes
performanceEstimation (1.1.0)
Maintainer: Luis Torgo ltorgo@dcc.fc.up.pt Bug reports: https://github.com/ltorgo/performanceEstimation/issues
0 errors | 0 warnings | 0 notes
permubiome (1.1)
Maintainer: Alfonso Benitez-Paez abenitez@iata.csic.es
0 errors | 0 warnings | 0 notes
perry (0.2.0)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
hasMethod: no visible global function definition for ‘getS3method’
Undefined global functions or variables:
getS3method
Consider adding
importFrom("utils", "getS3method")
to your NAMESPACE file.
perspectev (1.1)
Maintainer: Kenneth B. Hoehn perspectev@gmail.com
0 errors | 0 warnings | 0 notes
PGRdup (0.2.2.1)
Maintainer: J. Aravind j.aravind@icar.gov.in
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
ERROR: Duplicated records found in prim.key field
ERROR: NULL records found in prim.key field
OK: No duplicated records found in prim.key field
OK: No NULL records found in prim.key field
Fuzzy matching
Phonetic matching
Semantic matching
Fuzzy matching
Phonetic matching
Semantic matching
Quitting from lines 995-1061 (Introduction.Rmd)
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
formal argument "axis.ticks.y" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
ViewProbDup: possible error in theme(panel.background =
element_rect(fill = "transparent"), axis.title.x =
element_text(colour = "black", margin = margin(20, 0, 20, 0)),
axis.ticks.x = element_blank(), axis.text.x = element_blank(),
axis.ticks.y = element_blank(), axis.line = element_line(colour =
NA), axis.line.y = element_line(colour = "black"), axis.ticks.y =
element_line(colour = "black"), axis.text.y = element_text(colour =
"black"), axis.title.y = element_blank(), plot.margin = unit(c(0,
0.5, 0.5, 0.5), "cm"), panel.grid = element_blank()): formal argument
"axis.ticks.y" matched by multiple actual arguments
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘RecordLinkage’
PhaseType (0.1.3)
Maintainer: Louis Aslett louis@maths.tcd.ie
0 errors | 0 warnings | 3 notes
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘ggplot2’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
plot.phtMCMC: no visible global function definition for ‘ggplot’
plot.phtMCMC: no visible global function definition for ‘melt’
plot.phtMCMC: no visible global function definition for ‘geom_line’
plot.phtMCMC: no visible global function definition for ‘aes_string’
plot.phtMCMC: no visible global function definition for ‘geom_smooth’
plot.phtMCMC: no visible global function definition for ‘facet_wrap’
plot.phtMCMC: no visible global function definition for ‘ggtitle’
plot.phtMCMC: no visible global function definition for ‘xlab’
plot.phtMCMC: no visible global function definition for ‘ylab’
plot.phtMCMC: no visible global function definition for ‘geom_density’
Undefined global functions or variables:
aes_string facet_wrap geom_density geom_line geom_smooth ggplot
ggtitle melt xlab ylab
checking compiled code ... NOTE
File ‘PhaseType/libs/PhaseType.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘LJMA_arms.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
photobiologyInOut (0.4.12)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiologyinout/
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Read 3 items
Read 16 items
Quitting from lines 180-181 (user-guide.Rnw)
Error: processing vignette 'user-guide.Rnw' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyLamps (0.4.1)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiologylamps/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 41-43 (data-catalogue.Rmd)
Error: processing vignette 'data-catalogue.Rmd' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyLEDs (0.4.2)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiologyleds/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 50-52 (data-catalogue.Rmd)
Error: processing vignette 'data-catalogue.Rmd' failed with diagnostics:
StatPeaks was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
photobiologyPlants (0.4.0)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiologyplants
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 79-81 (dataplotsPlants.Rnw)
Error: processing vignette 'dataplotsPlants.Rnw' failed with diagnostics:
StatColorGuide was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
Phxnlme (1.0.0)
Maintainer: Chay Ngee Lim limxx356@umn.edu
0 errors | 0 warnings | 0 notes
phylopath (0.2.0)
Maintainer: Wouter van der Bijl wouter.van.der.bijl@zoologi.su.se Bug reports: https://github.com/Ax3man/phylopath/issues
0 errors | 0 warnings | 0 notes
phylosim (3.0.2)
Maintainer: Botond Sipos sbotond@gmail.com
0 errors | 0 warnings | 0 notes
physiology (0.2.2)
Maintainer: Jack O. Wasey jack@jackwasey.com Bug reports: https://github.com/jackwasey/physiology/issues
0 errors | 0 warnings | 0 notes
pid (0.36)
Maintainer: Kevin Dunn kevin.dunn@mcmaster.ca Bug reports: https://bitbucket.org/kevindunn/r-pid
0 errors | 0 warnings | 0 notes
pinbasic (0.1.0)
Maintainer: Andreas Recktenwald a.recktenwald@mx.uni-saarland.de
0 errors | 0 warnings | 0 notes
pipe.design (0.4)
Maintainer: Michael Sweeting mjs212@medschl.cam.ac.uk
0 errors | 0 warnings | 0 notes
pitchRx (1.8.2)
Maintainer: Carson Sievert cpsievert1@gmail.com Bug reports: http://github.com/cpsievert/pitchRx/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘ggsubplot’
PKgraph (1.7)
Maintainer: Xiaoyong Sun johnsunx1@gmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘rggobi’
Depends: includes the non-default packages:
‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘lattice’ ‘rggobi’ ‘ggplot2’
‘proto’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
PKreport (1.5)
Maintainer: Xiaoyong Sun johnsunx1@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
PKadjust: no visible binding for global variable ‘jpeg’
PKadjust: no visible binding for global variable ‘bmp’
PKadjust: no visible binding for global variable ‘png’
PKadjust: no visible binding for global variable ‘tiff’
PKadjust: no visible binding for global variable ‘dev.new’
PKadjust: no visible global function definition for ‘dev.off’
PKfigure: no visible global function definition for ‘dev.cur’
PKfigure: no visible global function definition for ‘dev.off’
PKoutput: no visible global function definition for ‘heatmap’
... 17 lines ...
initialize,nonmem: no visible global function definition for
‘read.table’
Undefined global functions or variables:
bmp browseURL dev.cur dev.new dev.off formula heatmap jpeg
packageDescription png quantile read.table tiff
Consider adding
importFrom("grDevices", "bmp", "dev.cur", "dev.new", "dev.off", "jpeg",
"png", "tiff")
importFrom("stats", "formula", "heatmap", "quantile")
importFrom("utils", "browseURL", "packageDescription", "read.table")
to your NAMESPACE file.
planar (1.6)
Maintainer: Baptiste Auguie baptiste.auguie@gmail.com
0 errors | 0 warnings | 0 notes
PlasmaMutationDetector (1.5.2)
Maintainer: Yves Rozenholc yves.rozenholc@parisdescartes.fr
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘VariantAnnotation’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
platetools (0.0.2)
Maintainer: Scott Warchal s.warchal@sms.ed.ac.uk
0 errors | 0 warnings | 0 notes
playwith (0.9-54)
Maintainer: Felix Andrews felix@nfrac.org
1 error | 0 warnings | 1 note
checking whether package ‘playwith’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/playwith.Rcheck/00install.out’ for details.
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘latticist’
plotluck (1.0.0)
Maintainer: Stefan Schroedl stefan.schroedl@gmx.de Bug reports: https://github.com/stefan-schroedl/plotluck/issues
1 error | 1 warning | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Factor variable price has too many levels (11602), truncating to 30
*** 2D box/violin plot ***
Factor variable rating has too many levels (91), truncating to 30
Error in match.arg(opts$geom, choices.geom) :
'arg' should be one of "spine", "heat", "auto"
Calls: test_check ... print -> plotluck -> determine.plot.type.1 -> match.arg
In addition: Warning message:
'switch' is deprecated.
Use 'strip.position' instead.
See help("Deprecated")
testthat results ================================================================
OK: 0 SKIPPED: 0 FAILED: 0
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 83-85 (plotluck.Rmd)
Error: processing vignette 'plotluck.Rmd' failed with diagnostics:
'sum' not defined for ordered factors
Execution halted
plotly (4.5.2)
Maintainer: Carson Sievert cpsievert1@gmail.com Bug reports: https://github.com/ropensci/plotly/issues
2 errors | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘plotly-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: style
> ### Title: Modify trace(s)
> ### Aliases: style
>
> ### ** Examples
>
>
> p <- qplot(data = mtcars, wt, mpg, geom = c("point", "smooth"))
> # keep the hover info for points, but remove it for the line/ribbon
> style(p, hoverinfo = "none", traces = c(2, 3))
Error in gg2list(p, width = width, height = height, tooltip = tooltip, :
attempt to apply non-function
Calls: style ... plotly_build.gg -> ggplotly -> ggplotly.ggplot -> gg2list
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Error: factor levels determine tick order (@test-cookbook-axes.R#28)
2. Error: ylim hides points (@test-cookbook-axes.R#36)
3. Error: scale_y(limits) hides points (@test-cookbook-axes.R#41)
4. Error: Using coord_cartesian zooms into the area (@test-cookbook-axes.R#49)
5. Error: A scatterplot with regular (linear) axis scaling (@test-cookbook-axes.R#64)
6. Error: log2 scaling of the y axis (with visually-equal spacing) (@test-cookbook-axes.R#71)
7. Error: log2 coordinate transformation with visually-diminishing spacing (@test-cookbook-axes.R#77)
8. Error: log2 transform with labels (@test-cookbook-axes.R#86)
9. Error: scale_y_log10 (@test-cookbook-axes.R#92)
1. ...
Error: testthat unit tests failed
Execution halted
plotMElm (0.1.4)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com Bug reports: https://github.com/christophergandrud/plotMElm/issues
0 errors | 0 warnings | 0 notes
PlotPrjNetworks (1.0.0)
Maintainer: Joaquin Bienvenido Ordieres Mere j.ordieres@upm.es
0 errors | 0 warnings | 0 notes
plotROC (2.0.1)
Maintainer: Michael C Sachs sachsmc@gmail.com Bug reports: http://github.com/sachsmc/plotROC/issues
0 errors | 0 warnings | 0 notes
plspm (0.4.7)
Maintainer: Gaston Sanchez gaston.stat@gmail.com Bug reports: https://github.com/gastonstat/plspm/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
alpha: no visible binding for global variable ‘sd’
dummy.G: no visible global function definition for ‘var’
get_GQI: no visible binding for global variable ‘sd’
get_GQI: no visible global function definition for ‘cor’
get_PLSR: no visible binding for global variable ‘var’
get_PLSR: no visible global function definition for ‘var’
get_PLSR: no visible global function definition for ‘cor’
get_PLSR_NA : <anonymous>: no visible global function definition for
‘var’
... 52 lines ...
summary.plspm: no visible global function definition for ‘cor’
unidim: no visible binding for global variable ‘sd’
unidim: no visible global function definition for ‘princomp’
Undefined global functions or variables:
cor cov cutree lines lm na.omit par plot princomp pt quantile sd
title var
Consider adding
importFrom("graphics", "lines", "par", "plot", "title")
importFrom("stats", "cor", "cov", "cutree", "lm", "na.omit",
"princomp", "pt", "quantile", "sd", "var")
to your NAMESPACE file.
pmc (1.0.2)
Maintainer: Carl Boettiger cboettig@gmail.com Bug reports: https://github.com/cboettig/pmc/issues
0 errors | 0 warnings | 0 notes
pogit (1.1.0)
Maintainer: Michaela Dvorzak m.dvorzak@gmx.at
0 errors | 0 warnings | 0 notes
pointRes (1.1.2)
Maintainer: Marieke van der Maaten-Theunissen marieketheunissen@gmail.com
0 errors | 0 warnings | 0 notes
pollstR (1.4.0)
Maintainer: Jeffrey B. Arnold jeffrey.arnold@gmail.com Bug reports: https://github.com/rOpenGov/pollstR/issues
0 errors | 0 warnings | 0 notes
pomp (1.9)
Maintainer: Aaron A. King kingaa@umich.edu Bug reports: http://github.com/kingaa/pomp/issues
0 errors | 0 warnings | 0 notes
PopED (0.3.1)
Maintainer: Andrew C. Hooker andrew.hooker@farmbio.uu.se Bug reports: https://github.com/andrewhooker/PopED/issues
0 errors | 0 warnings | 0 notes
popEpi (0.4.0)
Maintainer: Joonas Miettinen joonas.miettinen@cancer.fi Bug reports: https://github.com/WetRobot/popEpi/issues
0 errors | 0 warnings | 0 notes
PopGenReport (2.2.2)
Maintainer: Bernd Gruber bernd.gruber@canberra.edu.au
0 errors | 0 warnings | 0 notes
popgraph (1.4)
Maintainer: Rodney J. Dyer rjdyer@vcu.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
as.popgraph: no visible global function definition for ‘is’
centroid_distance: no visible global function definition for ‘is’
centroid_variance: no visible global function definition for ‘is’
centroid_variance: no visible global function definition for ‘cov’
decorate_graph: no visible global function definition for ‘is’
overlay_popgraph: no visible global function definition for ‘is’
overlay_popgraph: no visible global function definition for ‘lines’
overlay_popgraph: no visible global function definition for ‘points’
overlay_popgraph: no visible global function definition for ‘text’
... 12 lines ...
‘write.csv’
Undefined global functions or variables:
cor.test cov is lines points prcomp qchisq read.table text var
write.csv
Consider adding
importFrom("graphics", "lines", "points", "text")
importFrom("methods", "is")
importFrom("stats", "cor.test", "cov", "prcomp", "qchisq", "var")
importFrom("utils", "read.table", "write.csv")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
poppr (2.2.1)
Maintainer: Zhian N. Kamvar kamvarz@science.oregonstate.edu Bug reports: https://github.com/grunwaldlab/poppr/issues
0 errors | 0 warnings | 0 notes
popReconstruct (1.0-4)
Maintainer: "Mark C. Wheldon" mwheldon@aut.ac.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
estMod.rinvGamma.mar29: no visible global function definition for
‘rgamma’
life.expectancy.stationary: no visible global function definition for
‘head’
life.expectancy.stationary: no visible global function definition for
‘tail’
log.lhood.mar29: no visible global function definition for ‘dnorm’
log.post.mar29: no visible global function definition for ‘dnorm’
popRecon.sampler: no visible global function definition for ‘rnorm’
popRecon.sampler: no visible global function definition for ‘runif’
Undefined global functions or variables:
dnorm head rgamma rnorm runif tail
Consider adding
importFrom("stats", "dnorm", "rgamma", "rnorm", "runif")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
PortfolioEffectHFT (1.7)
Maintainer: Andrey Kostin andrey.kostin@portfolioeffect.com
1 error | 0 warnings | 0 notes
checking whether package ‘PortfolioEffectHFT’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/PortfolioEffectHFT.Rcheck/00install.out’ for details.
powerbydesign (1.0.3)
Maintainer: Frank Papenmeier frank.papenmeier@uni-tuebingen.de
0 errors | 0 warnings | 0 notes
PPtreeViz (1.3.0)
Maintainer: Eun-Kyung Lee lee.eunk@gmail.com
0 errors | 0 warnings | 0 notes
prcbench (0.5.2)
Maintainer: Takaya Saito takaya.saito@outlook.com Bug reports: https://github.com/takayasaito/prcbench/issues
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘prcbench-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ToolAUCCalculator
> ### Title: R6 class of the AUCCalculator tool
> ### Aliases: ToolAUCCalculator
> ### Keywords: datasets
>
> ### ** Examples
>
> ## Initialization
> toolauccalc <- ToolAUCCalculator$new()
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Error in rJava::.jinit() : JNI_GetCreatedJavaVMs returned -1
Calls: <Anonymous> ... .get_java_obj -> withVisible -> _f -> <Anonymous> -> .External
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
1. Error: run_benchmark (@test_main_benchmark.R#32)
2. Error: run_benchmark: testset (@test_main_benchmark.R#58)
3. Error: run_benchmark: toolset (@test_main_benchmark.R#84)
4. Error: run_benchmark: times (@test_main_benchmark.R#131)
5. Error: run_benchmark: unit (@test_main_benchmark.R#166)
6. Error: run_evalcurve (@test_main_evalcurves.R#6)
7. Error: run_evalcurve: testset (@test_main_evalcurves.R#19)
8. Error: run_evalcurve: toolset (@test_main_evalcurves.R#32)
9. Error: run_evalcurve testscores (@test_main_evalcurves.R#57)
1. ...
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Quitting from lines 65-70 (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
JNI_GetCreatedJavaVMs returned -1
Execution halted
precintcon (2.3.0)
Maintainer: Lucas Venezian Povoa lucasvenez@gmail.com Bug reports: https://github.com/lucasvenez/precintcon/issues
0 errors | 0 warnings | 0 notes
precrec (0.5.2)
Maintainer: Takaya Saito takaya.saito@outlook.com Bug reports: https://github.com/takayasaito/precrec/issues
0 errors | 0 warnings | 0 notes
predictionInterval (1.0.0)
Maintainer: David Stanley dstanley@uoguelph.ca
0 errors | 0 warnings | 0 notes
predictmeans (0.99)
Maintainer: Dongwen Luo dongwen.luo@agresearch.co.nz
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
CookD: no visible global function definition for ‘update’
CookD: no visible global function definition for ‘model.frame’
CookD : <anonymous>: no visible global function definition for ‘update’
CookD: no visible global function definition for ‘dev.new’
CookD: no visible global function definition for ‘text’
CookD: no visible global function definition for ‘points’
Kmatrix: no visible global function definition for ‘slot’
Kmatrix: no visible global function definition for ‘model.matrix’
Kmatrix: no visible global function definition for ‘terms’
... 128 lines ...
"legend", "lines", "par", "plot", "points", "text", "title")
importFrom("methods", "slot")
importFrom("stats", "anova", "as.formula", "coef", "delete.response",
"family", "fitted", "formula", "ftable", "lm.influence",
"loess.smooth", "model.frame", "model.matrix", "na.omit",
"na.pass", "p.adjust", "ppoints", "predict", "pt", "ptukey",
"qnorm", "qqline", "qqnorm", "qt", "resid", "residuals",
"terms", "update", "vcov", "xtabs")
importFrom("utils", "edit")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
PredictTestbench (1.1.1)
Maintainer: Neeraj Bokde neerajdhanraj@gmail.com Bug reports: https://github.com/neerajdhanraj/PredictTestbench/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 43-46 (my-vignette.Rmd)
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
argument "pred" is missing, with no default
Execution halted
PReMiuM (3.1.3)
Maintainer: Silvia Liverani liveranis@gmail.com
0 errors | 0 warnings | 0 notes
preprocomb (0.3.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com Bug reports: https://github.com/mvattulainen/preprocomb/issues
0 errors | 0 warnings | 0 notes
preprosim (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com Bug reports: https://github.com/mvattulainen/preprosim/issues
0 errors | 0 warnings | 0 notes
preproviz (0.2.0)
Maintainer: Markus Vattulainen markus.vattulainen@gmail.com Bug reports: https://github.com/mvattulainen/preproviz/issues
0 errors | 0 warnings | 0 notes
preText (0.4.4)
Maintainer: Matthew J. Denny mdenny@psu.edu
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
Missing or unexported object: ‘cowplot::switch_axis_position’
prevR (3.3)
Maintainer: Joseph Larmarange joseph.larmarange@ird.fr
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘sparr’
pRF (1.2)
Maintainer: Ankur Chakravarthy ankur.chakravarthy.10@ucl.ac.uk
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
primerTree (1.0.3)
Maintainer: Jim Hester james.f.hester@gmail.com
0 errors | 0 warnings | 0 notes
prism (0.0.7)
Maintainer: Hart Edmund Edmund.m.hart@gmail.com Bug reports: http://github.com/ropensci/prism/issues
0 errors | 0 warnings | 0 notes
PRISMA (0.2-5)
Maintainer: Tammo Krueger tammokrueger@googlemail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
corpusToPrisma: no visible global function definition for
‘packageVersion’
estimateDimension : calcConfidence: no visible global function
definition for ‘qnorm’
filterDataByTestAndCor: no visible global function definition for
‘p.adjust’
plot.prismaDimension: no visible binding for global variable ‘var’
plotMatrixFactor: no visible global function definition for
‘as.dendrogram’
... 14 lines ...
Undefined global functions or variables:
as.dendrogram cutree dist gray hclust new p.adjust packageVersion
pnorm prcomp qnorm read.table rnorm var
Consider adding
importFrom("grDevices", "gray")
importFrom("methods", "new")
importFrom("stats", "as.dendrogram", "cutree", "dist", "hclust",
"p.adjust", "pnorm", "prcomp", "qnorm", "rnorm", "var")
importFrom("utils", "packageVersion", "read.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
productplots (0.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/productplots/issues
0 errors | 0 warnings | 0 notes
profileR (0.3-3)
Maintainer: Christopher David Desjardins cddesjardins@gmail.com
0 errors | 0 warnings | 0 notes
profr (0.3.1)
Maintainer: Hadley Wickham h.wickham@gmail.com Bug reports: https://github.com/hadley/profr/issues
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘ggplot2’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
.simplify : <anonymous>: no visible binding for global variable ‘hist’
.simplify : <anonymous>: no visible binding for global variable ‘start’
.simplify: no visible binding for global variable ‘start’
.simplify: no visible binding for global variable ‘end’
ggplot.profr: no visible global function definition for ‘ggplot’
ggplot.profr: no visible global function definition for ‘geom_rect’
ggplot.profr: no visible global function definition for ‘aes’
ggplot.profr: no visible binding for global variable ‘start’
ggplot.profr: no visible binding for global variable ‘end’
... 9 lines ...
plot.profr: no visible binding for global variable ‘time’
plot.profr: no visible global function definition for ‘text’
profr: no visible global function definition for ‘Rprof’
Undefined global functions or variables:
Rprof aes end geom_rect geom_text ggplot hist plot rect
scale_x_continuous scale_y_continuous start text time
Consider adding
importFrom("graphics", "hist", "plot", "rect", "text")
importFrom("stats", "end", "start", "time")
importFrom("utils", "Rprof")
to your NAMESPACE file.
profvis (0.3.2)
Maintainer: Winston Chang winston@rstudio.com
0 errors | 0 warnings | 0 notes
ProgGUIinR (0.0-4)
Maintainer: John Verzani verzani@math.csi.cuny.edu
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘qtbase’
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
browseRGtk2Files: no visible global function definition for ‘gtkWindow’
browseRGtk2Files: no visible global function definition for ‘gtkVBox’
browseRGtk2Files: no visible global function definition for
‘gtkToolbar’
browseRGtk2Files: no visible global function definition for ‘gtkHPaned’
browseRGtk2Files: no visible global function definition for ‘gtkFrame’
browseRGtk2Files: no visible global function definition for
‘gtkTextView’
browseRGtk2Files: no visible global function definition for
... 168 lines ...
gtkScrolledWindow gtkSeparatorToolItem gtkStatusbar gtkTextBuffer
gtkTextView gtkToolButton gtkToolbar gtkTreeView gtkTreeViewColumn
gtkTypeGetSignals gtkVBox gtkVBoxNew gtkWindow gwindow help
rGtkDataFrame svalue svalue<- tcl tclvalue tkbind tkconfigure
tkdelete tkget tkgrid tkgrid.columnconfigure tkgrid.rowconfigure
tkinsert tkmenu tkpack tksee tkset tktag.add tktag.configure
tktag.remove tktext tktoplevel tkwm.title tkxview ttkbutton ttkframe
ttklabel ttkpanedwindow ttkscrollbar ttktreeview visible<-
Consider adding
importFrom("utils", "apropos", "help")
to your NAMESPACE file.
ProjectTemplate (0.7)
Maintainer: Kenton White jkentonwhite@gmail.com Bug reports: https://github.com/johnmyleswhite/ProjectTemplate/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RODBC’
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
proportion (1.2.3)
Maintainer: Rajeswaran Viswanathan v.rajeswaran@gmail.com Bug reports: https://github.com/RajeswaranV/proportion/issues
0 errors | 1 warning | 1 note
checking sizes of PDF files under ‘inst/doc’ ... WARNING
‘gs+qpdf’ made some significant size reductions:
compacted ‘proportion.pdf’ from 689Kb to 387Kb
consider running tools::compactPDF(gs_quality = "ebook") on these files
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘PropCIs’, ‘BlakerCI’, ‘prevalence’
propr (2.0.4)
Maintainer: Thomas Quinn contacttomquinn@gmail.com Bug reports: http://github.com/tpq/propr/issues
0 errors | 0 warnings | 0 notes
proteomics (0.2)
Maintainer: Thomas W. D. Möbius kontakt@thomasmoebius.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
addIonSatistics: no visible binding for global variable ‘median’
adjustOne: no visible binding for global variable ‘median’
attachModifications: no visible global function definition for
‘na.omit’
avrgLoadingCalculation: no visible binding for global variable ‘median’
channelResponses : estimate: no visible binding for global variable
‘var’
responseStatisics : func: no visible global function definition for
‘aggregate’
testing: no visible global function definition for ‘aov’
testingOneshot: no visible global function definition for ‘anova’
testingTukey: no visible global function definition for ‘TukeyHSD’
Undefined global functions or variables:
TukeyHSD aggregate anova aov median na.omit var
Consider adding
importFrom("stats", "TukeyHSD", "aggregate", "anova", "aov", "median",
"na.omit", "var")
to your NAMESPACE file.
PRROC (1.1)
Maintainer: Jan Grau grau@informatik.uni-halle.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
plot.PRROC: no visible global function definition for ‘hsv’
plot.PRROC: no visible global function definition for ‘grey’
plot.PRROC: no visible global function definition for ‘lcm’
plot.PRROC: no visible global function definition for ‘layout’
plot.PRROC: no visible global function definition for ‘plot’
plot.PRROC: no visible global function definition for ‘polygon’
plot.PRROC: no visible global function definition for ‘lines’
plot.PRROC: no visible global function definition for ‘segments’
plot.PRROC: no visible global function definition for ‘par’
plot.PRROC: no visible global function definition for ‘image’
plot.PRROC: no visible global function definition for ‘axis’
Undefined global functions or variables:
axis grey hsv image layout lcm lines par plot polygon segments
Consider adding
importFrom("grDevices", "grey", "hsv")
importFrom("graphics", "axis", "image", "layout", "lcm", "lines",
"par", "plot", "polygon", "segments")
to your NAMESPACE file.
PSAboot (1.1.4)
Maintainer: Jason Bryer jason@bryer.org Bug reports: https://github.com/jbryer/PSAboot/issues
0 errors | 0 warnings | 0 notes
PSCBS (0.61.0)
Maintainer: Henrik Bengtsson henrikb@braju.com Bug reports: https://github.com/HenrikBengtsson/PSCBS/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘DNAcopy’
Package suggested but not available for checking: ‘aroma.light’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
pscore (0.1-2)
Maintainer: Joshua F. Wiley jwiley.psych@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
mahalanobisComposite: no visible global function definition for
‘princomp’
prepareComposite: no visible global function definition for ‘cov’
winsorizor : f: no visible global function definition for ‘quantile’
Undefined global functions or variables:
cov princomp quantile
Consider adding
importFrom("stats", "cov", "princomp", "quantile")
to your NAMESPACE file.
psd (1.0-1)
Maintainer: Andrew J. Barbour andy.barbour@gmail.com Bug reports: https://github.com/abarbour/psd/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
ctap_loess.default: no visible global function definition for
‘loess.control’
lines.spec: no visible global function definition for ‘plot’
pgram_compare.amt: no visible global function definition for ‘as.ts’
pgram_compare.amt: no visible global function definition for
‘frequency’
pgram_compare.amt: no visible global function definition for
‘spec.pgram’
pgram_compare.amt: no visible global function definition for ‘par’
... 41 lines ...
abline acf as.ts frequency head is.ts layout legend lines lm
loess.control mtext par pchisq plot qchisq residuals spec.pgram start
tail title ts var
Consider adding
importFrom("graphics", "abline", "layout", "legend", "lines", "mtext",
"par", "plot", "title")
importFrom("stats", "acf", "as.ts", "frequency", "is.ts", "lm",
"loess.control", "pchisq", "qchisq", "residuals",
"spec.pgram", "start", "ts", "var")
importFrom("utils", "head", "tail")
to your NAMESPACE file.
pseval (1.3.0)
Maintainer: Michael C Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘printr’
PTXQC (0.80.14)
Maintainer: Chris Bielow chris.bielow@mdc-berlin.de Bug reports: https://github.com/cbielow/PTXQC/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
doc 3.5Mb
examples 2.3Mb
pwr (1.2-0)
Maintainer: Helios De Rosario helios.derosario@gmail.com
0 errors | 0 warnings | 0 notes
pxweb (0.6.3)
Maintainer: Mans Magnusson mons.magnusson@gmail.com Bug reports: https://github.com/rOpenGov/pxweb/issues
0 errors | 0 warnings | 0 notes
QCAtools (0.2.2)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu
0 errors | 0 warnings | 0 notes
QCSimulator (0.0.1)
Maintainer: Tinniam V Ganeshtvganesh.85@gmail.com
0 errors | 0 warnings | 0 notes
qdap (2.2.5)
Maintainer: Tyler Rinker tyler.rinker@gmail.com Bug reports: http://github.com/trinker/qdap/issues
1 error | 0 warnings | 0 notes
checking whether package ‘qdap’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/qdap.Rcheck/00install.out’ for details.
qgraph (1.4.0)
Maintainer: Sacha Epskamp mail@sachaepskamp.com
0 errors | 0 warnings | 0 notes
qicharts (0.5.1)
Maintainer: Jacob Anhoej jacob@anhoej.net
0 errors | 0 warnings | 0 notes
quadrupen (0.2-4)
Maintainer: Julien Chiquet julien.chiquet@genopole.cnrs.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
crossval: no visible global function definition for ‘modifyList’
stability: no visible global function definition for ‘modifyList’
stability : bloc.stability: no visible global function definition for
‘runif’
plot,cvpen: no visible binding for global variable ‘lambda1’
plot,cvpen: no visible binding for global variable ‘lambda2’
plot,cvpen: no visible global function definition for ‘quantile’
plot,cvpen: no visible binding for global variable ‘serr’
plot,cvpen: no visible binding for global variable ‘xval’
plot,cvpen: no visible binding for global variable ‘lambda.choice’
plot,quadrupen: no visible binding for global variable ‘coefficients’
plot,quadrupen: no visible binding for global variable ‘variables’
plot,quadrupen: no visible binding for global variable ‘var’
plot,quadrupen: no visible binding for global variable ‘coef’
plot,stability.path: no visible binding for global variable ‘variables’
plot,stability.path: no visible binding for global variable ‘var’
Undefined global functions or variables:
coef coefficients lambda.choice lambda1 lambda2 modifyList quantile
runif serr var variables xval
Consider adding
importFrom("stats", "coef", "coefficients", "quantile", "runif", "var")
importFrom("utils", "modifyList")
to your NAMESPACE file.
QualInt (1.0.0)
Maintainer: Lixi Yu lixi-yu@uiowa.edu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
alphaf: no visible global function definition for ‘pchisq’
alphaf: no visible global function definition for ‘dbinom’
conout: no visible global function definition for ‘sd’
ibgaout: no visible global function definition for ‘qnorm’
ibgaout: no visible global function definition for ‘pnorm’
plot.qualint: no visible global function definition for ‘qnorm’
powerval: no visible global function definition for ‘rnorm’
powerval: no visible global function definition for ‘qnorm’
powerval: no visible global function definition for ‘pnorm’
... 9 lines ...
surout: no visible global function definition for ‘tail’
surout: no visible global function definition for ‘coef’
Undefined global functions or variables:
coef dbinom gray pchisq plot pnorm qnorm rnorm sd tail
Consider adding
importFrom("grDevices", "gray")
importFrom("graphics", "plot")
importFrom("stats", "coef", "dbinom", "pchisq", "pnorm", "qnorm",
"rnorm", "sd")
importFrom("utils", "tail")
to your NAMESPACE file.
qualvar (0.1.0)
Maintainer: Joel Gombin joel.gombin@gmail.com
0 errors | 0 warnings | 0 notes
quanteda (0.9.8.5)
Maintainer: Kenneth Benoit kbenoit@lse.ac.uk Bug reports: https://github.com/kbenoit/quanteda/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
as.dist, dist
The following object is masked from 'package:base':
as.matrix
testthat results ================================================================
OK: 240 SKIPPED: 1 FAILED: 2
1. Failure: test plot.kwic facet order parameter (@testPlots.R#70)
2. Failure: test plot.kwic keeps order of keywords passed (@testPlots.R#81)
Error: testthat unit tests failed
Execution halted
QuantumClone (0.16.8.19)
Maintainer: Paul Deveau paul.deveau@curie.fr Bug reports: https://github.com/DeveauP/QuantumClone/issues
0 errors | 0 warnings | 0 notes
quickpsy (0.1.4)
Maintainer: Linares Daniel danilinares@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘quickpsy-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotcurves
> ### Title: Plot the curves
> ### Aliases: plotcurves
>
> ### ** Examples
>
> library(MPDiR) # contains the Vernier data
> fit <- quickpsy(Vernier, Phaseshift, NumUpward, N,
+ grouping = .(Direction, WaveForm, TempFreq), B = 5)
> plotcurves(fit)
Error: Aesthetics must be either length 1 or the same as the data (8): ymin, ymax, colour, x
Execution halted
quickReg (1.0.0)
Maintainer: Xikun Han hanxikun2014@163.com Bug reports: Xikun Han hanxikun2014@163.com
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘PredictABEL’
qwraps2 (0.2.2)
Maintainer: Peter DeWitt dewittpe@gmail.com
0 errors | 0 warnings | 0 notes
R2admb (0.7.13)
Maintainer: Ben Bolker bolker@mcmaster.ca
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
AIC.admb: no visible global function definition for ‘deviance’
AIC.admb: no visible global function definition for ‘coef’
check_section : make_names: no visible global function definition for
‘na.omit’
compile_admb: no visible global function definition for ‘head’
confint.admb: no visible global function definition for ‘coef’
confint.admb: no visible global function definition for ‘qnorm’
confint.admb: no visible binding for global variable ‘quantile’
dat_write: no visible global function definition for ‘write.table’
... 18 lines ...
Consider adding
importFrom("stats", "coef", "deviance", "na.omit", "pnorm",
"printCoefmat", "qnorm", "quantile", "vcov")
importFrom("utils", "count.fields", "head", "read.table",
"write.table")
to your NAMESPACE file.
Found the following calls to attach():
File ‘R2admb/R/check_section.R’:
attach(R_list, name = "R_list", warn.conflicts = FALSE)
See section ‘Good practice’ in ‘?attach’.
r2glmm (0.1.0)
Maintainer: Byron Jaeger byron.jaeger@gmail.com Bug reports: https://github.com/bcjaeger/r2glmm/issues
0 errors | 0 warnings | 0 notes
R6 (2.2.0)
Maintainer: Winston Chang winston@stdout.org
0 errors | 0 warnings | 0 notes
radiant.basics (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu Bug reports: https://github.com/radiant-rstats/radiant.basics/issues
0 errors | 0 warnings | 0 notes
radiant.data (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu Bug reports: https://github.com/radiant-rstats/radiant.data/issues
0 errors | 0 warnings | 0 notes
radiant.model (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu Bug reports: https://github.com/radiant-rstats/radiant.model/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘radiant.model-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.model.predict
> ### Title: Plot method for model.predict functions
> ### Aliases: plot.model.predict
>
> ### ** Examples
>
> regress("diamonds", "price", c("carat","clarity")) %>%
+ predict(pred_cmd = "carat = 1:10") %>%
+ plot(xvar = "carat")
> logistic("titanic", "survived", c("pclass","sex","age"), lev = "Yes") %>%
+ predict(pred_cmd="pclass=levels(pclass), sex=levels(sex), age=seq(0,100,20)") %>%
+ plot(xvar = "age", color = "sex", facet_col = "pclass")
Error in rep(yes, length.out = length(ans)) :
attempt to replicate an object of type 'closure'
Calls: %>% ... <Anonymous> -> plot -> plot.model.predict -> ifelse
Execution halted
radiant.multivariate (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu Bug reports: https://github.com/radiant-rstats/radiant.multivariate/issues
0 errors | 0 warnings | 0 notes
rags2ridges (2.1.1)
Maintainer: Carel F.W. Peeters cf.peeters@vumc.nl
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘KEGGgraph’ ‘graph’
ragtop (0.5)
Maintainer: Brian K. Boonstra ragtop@boonstra.org
0 errors | 0 warnings | 0 notes
raincpc (0.4)
Maintainer: Gopi Goteti my.ration.shop@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cpc_get_rawdata: no visible global function definition for
‘download.file’
Undefined global functions or variables:
download.file
Consider adding
importFrom("utils", "download.file")
to your NAMESPACE file.
rAltmetric (0.6)
Maintainer: Karthik Ram karthik.ram@gmail.com Bug reports: https://github.com/ropensci/rAltmetric/issues/
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
altmetric_data: no visible global function definition for ‘is’
plot.altmetric: no visible global function definition for ‘is’
Undefined global functions or variables:
is
Consider adding
importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
RAM (1.2.1.3)
Maintainer: Wen Chen Wen.Chen@agr.gc.ca Bug reports: https://bitbucket.org/Wen_Chen/ram_releases/issues/
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Heatplus’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘Heatplus’
randomizeR (1.3)
Maintainer: Diane Uschner duschner@ukaachen.de
0 errors | 0 warnings | 0 notes
randomUniformForest (1.1.5)
Maintainer: Saip Ciss saip.ciss@wanadoo.fr
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
HuberDist: no visible global function definition for ‘median’
MDSscale: no visible global function definition for ‘plot’
OOBquantiles : <anonymous>: no visible global function definition for
‘quantile’
OOBquantiles : <anonymous>: no visible global function definition for
‘sd’
OOBquantiles: no visible global function definition for ‘quantile’
OOBquantiles: no visible global function definition for ‘plot’
bCICore: no visible global function definition for ‘quantile’
... 185 lines ...
Consider adding
importFrom("grDevices", "dev.new", "dev.off", "graphics.off",
"heat.colors")
importFrom("graphics", "abline", "barplot", "grid", "legend",
"mosaicplot", "par", "persp", "plot", "points", "title")
importFrom("stats", "aggregate", "cor", "dist", "kmeans", "lm",
"median", "model.frame", "model.matrix", "model.response",
"na.omit", "pbinom", "predict", "qnorm", "quantile",
"rnorm", "runif", "sd")
importFrom("utils", "head", "memory.limit")
to your NAMESPACE file.
rangeMapper (0.3-0)
Maintainer: Mihai Valcu valcu@orn.mpg.de
0 errors | 0 warnings | 0 notes
rangemodelR (1.0.1)
Maintainer: Aniruddha Marathe aniruddha.pravin.marathe@gmail.com
0 errors | 0 warnings | 0 notes
raptr (0.0.1)
Maintainer: Jeffrey O Hanson jeffrey.hanson@uqconnect.edu.au Bug reports: https://github.com/jeffreyhanson/raptr/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘hypervolume’ ‘gdalUtils’
Packages suggested but not available for checking: ‘gurobi’ ‘rgurobi’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
rasterVis (0.40)
Maintainer: Oscar Perpinan Lamigueiro oscar.perpinan@gmail.com Bug reports: https://github.com/oscarperpinan/rastervis/issues
0 errors | 0 warnings | 0 notes
rattle (4.1.0)
Maintainer: Graham Williams Graham.Williams@togaware.com
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘graph’ ‘RBGL’ ‘rggobi’ ‘RODBC’ ‘pkgDepTools’ ‘Rgraphviz’
checking installed package size ... NOTE
installed size is 6.8Mb
sub-directories of 1Mb or more:
data 2.5Mb
etc 1.9Mb
po 1.2Mb
checking dependencies in R code ... NOTE
(R:37892): Gtk-WARNING **: gtk_disable_setlocale() must be called before gtk_init()
raw (0.1.2)
Maintainer: Brian A. Fannin FanninQED@yahoo.com
0 errors | 0 warnings | 0 notes
rbefdata (0.3.5)
Maintainer: Claas-Thido Pfaff claas-thido.pfaff@idiv-biodiversity.de
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
bef.get.attachments: no visible global function definition for
‘read.csv’
bef.get.attachments: no visible global function definition for
‘flush.console’
bef.get.attachments_for: no visible global function definition for
‘read.csv’
bef.get.attachments_for: no visible global function definition for
‘flush.console’
bef.get.categories_for: no visible binding for global variable ‘id’
... 30 lines ...
bef.portal.get.datasets.for_keyword : <anonymous>: no visible global
function definition for ‘read.csv’
bef.portal.get.datasets.for_proposal: no visible global function
definition for ‘read.csv’
upload_file: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
browseURL flush.console id read.csv write.csv
Consider adding
importFrom("utils", "browseURL", "flush.console", "read.csv",
"write.csv")
to your NAMESPACE file.
rbison (0.5.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rbison/issues
0 errors | 0 warnings | 0 notes
rbokeh (0.5.0)
Maintainer: Ryan Hafen rhafen@gmail.com Bug reports: https://github.com/bokeh/rbokeh/issues
0 errors | 0 warnings | 0 notes
rchess (0.1)
Maintainer: Joshua Kunst jbkunst@gmail.com Bug reports: https://github.com/jbkunst/rchess/issues
0 errors | 0 warnings | 0 notes
rclinicaltrials (1.4.1)
Maintainer: Michael C Sachs sachsmc@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
clinicaltrials_download: no visible global function definition for
‘unzip’
Undefined global functions or variables:
unzip
Consider adding
importFrom("utils", "unzip")
to your NAMESPACE file.
RcmdrPlugin.KMggplot2 (0.2-3)
Maintainer: Triad sou. triadsou@gmail.com
0 errors | 0 warnings | 0 notes
RcmdrPlugin.MA (0.0-2)
Maintainer: A. C. Del Re acdelre@gmail.com
0 errors | 0 warnings | 0 notes
RCMIP5 (1.2.0)
Maintainer: Kathe Todd-Brown ktoddbrown@gmail.com
0 errors | 0 warnings | 0 notes
rddtools (0.4.0)
Maintainer: Bastiaan Quast bquast@gmail.com Bug reports: https://github.com/bquast/RDDtools/issues
0 errors | 0 warnings | 0 notes
RDML (0.9-1)
Maintainer: Konstantin A. Blagodatskikh k.blag@yandex.ru
0 errors | 0 warnings | 0 notes
rdpla (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rdpla/issues
0 errors | 0 warnings | 0 notes
RDS (0.7-7)
Maintainer: Mark S. Handcock handcock@stat.ucla.edu
0 errors | 0 warnings | 0 notes
reda (0.2.1)
Maintainer: Wenjie Wang wenjie.2.wang@uconn.edu Bug reports: https://github.com/wenjie2wang/reda/issues
0 errors | 0 warnings | 0 notes
refund (0.1-16)
Maintainer: Lei Huang huangracer@gmail.com
0 errors | 0 warnings | 0 notes
refund.shiny (0.2.0)
Maintainer: Julia Wrobel jw3134@cumc.columbia.edu
0 errors | 0 warnings | 0 notes
rem (1.1.2)
Maintainer: Laurence Brandenberger laurence.brandenberger@eawag.ch
0 errors | 0 warnings | 0 notes
repijson (0.1.0)
Maintainer: Andy South southandy@gmail.com
0 errors | 0 warnings | 0 notes
replicationInterval (2.0.1)
Maintainer: David Stanley dstanley@uoguelph.ca
0 errors | 0 warnings | 0 notes
ReporteRs (0.8.7)
Maintainer: David Gohel david.gohel@lysis-consultants.fr Bug reports: https://github.com/davidgohel/ReporteRs/issues
1 error | 0 warnings | 0 notes
checking whether package ‘ReporteRs’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/ReporteRs.Rcheck/00install.out’ for details.
reproducer (0.1.6)
Maintainer: Lech Madeyski lech.madeyski@gmail.com
0 errors | 0 warnings | 0 notes
reval (2.0.0)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com Bug reports: https://github.com/mkoohafkan/reval/issues
0 errors | 0 warnings | 0 notes
rex (1.1.1)
Maintainer: Jim Hester james.f.hester@gmail.com Bug reports: https://github.com/kevinushey/rex/issues
0 errors | 0 warnings | 0 notes
rfigshare (0.3.7)
Maintainer: Carl Boettiger cboettig@gmail.com Bug reports: https://github.com/ropensci/rfigshare/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
fs_author_ids : <anonymous>: no visible global function definition for
‘select.list’
fs_download : <anonymous>: no visible global function definition for
‘download.file’
Undefined global functions or variables:
download.file select.list
Consider adding
importFrom("utils", "download.file", "select.list")
to your NAMESPACE file.
RFinfer (0.2.0)
Maintainer: Cole Brokamp cole.brokamp@gmail.com Bug reports: https://github.com/cole-brokamp/RFinfer/issues
0 errors | 0 warnings | 0 notes
rfisheries (0.2)
Maintainer: Karthik Ram karthik.ram@gmail.com Bug reports: http://www.github.com/ropensci/rfisheries/issues/new
0 errors | 0 warnings | 0 notes
RFmarkerDetector (1.0.1)
Maintainer: Piergiorgio Palla piergiorgio.palla@diee.unica.it
0 errors | 0 warnings | 0 notes
rfordummies (0.1.2)
Maintainer: Andrie de Vries apdevries@gmail.com Bug reports: https://github.com/andrie/rfordummies/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘rfordummies-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: saveElements
> ### Title: Saves a copy of the periodic table of elements as excel or csv
> ### file.
> ### Aliases: saveElements
>
> ### ** Examples
>
> saveElements(file.path(tempdir(), "elements.xlsx"))
Loading required namespace: XLConnect
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
Failed with error: ‘.onLoad failed in loadNamespace() for 'XLConnectJars', details:
call: .jinit()
error: JNI_GetCreatedJavaVMs returned -1
’
Error in saveElements(file.path(tempdir(), "elements.xlsx")) :
Unable to create excel file. Install the XLConnect package and try again.
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
rfPermute (2.1.5)
Maintainer: Eric Archer eric.archer@noaa.gov Bug reports: https://github.com/EricArcher/rfPermute/issues
0 errors | 0 warnings | 0 notes
rgbif (0.9.5)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rgbif/issues
0 errors | 0 warnings | 0 notes
RGraphics (2.0-14)
Maintainer: Paul Murrell paul@stat.auckland.ac.nz
0 errors | 0 warnings | 3 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘graph’ ‘hyperdraw’ ‘hypergraph’ ‘rggobi’ ‘Rgraphviz’ ‘SVGAnnotation’
checking installed package size ... NOTE
installed size is 9.6Mb
sub-directories of 1Mb or more:
extra 9.4Mb
checking dependencies in R code ... NOTE
(R:44269): Gtk-WARNING **: gtk_disable_setlocale() must be called before gtk_init()
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
RImagePalette (0.1.1)
Maintainer: Joel Carlson jnkcarlson@gmail.com
0 errors | 0 warnings | 0 notes
rinat (0.1.4)
Maintainer: Edmund Hart edmund.m.hart@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
get_inat_obs: no visible global function definition for ‘read.csv’
get_inat_obs_project: no visible global function definition for
‘read.csv’
get_inat_obs_user: no visible global function definition for ‘read.csv’
inat_handle: no visible binding for global variable ‘data’
Undefined global functions or variables:
data read.csv
Consider adding
importFrom("utils", "data", "read.csv")
to your NAMESPACE file.
rivr (1.2)
Maintainer: Michael C Koohafkan michael.koohafkan@gmail.com Bug reports: https://github.com/mkoohafkan/rivr/issues
0 errors | 0 warnings | 0 notes
RJafroc (0.1.1)
Maintainer: Xuetong Zhai xuetong.zhai@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘RJafroc’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/RJafroc.Rcheck/00install.out’ for details.
RmarineHeatWaves (0.13.1)
Maintainer: Albertus J. Smit albertus.smit@gmail.com
0 errors | 0 warnings | 0 notes
rmcfs (1.1.2)
Maintainer: Michal Draminski mdramins@ipipan.waw.pl
1 error | 0 warnings | 0 notes
checking whether package ‘rmcfs’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rmcfs.Rcheck/00install.out’ for details.
rmetasim (3.0.5)
Maintainer: Allan Strand stranda@cofc.edu
0 errors | 0 warnings | 0 notes
rms (5.0-0)
Maintainer: Frank E Harrell Jr f.harrell@vanderbilt.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
RndTexExams (1.4)
Maintainer: Marcelo Perlin marceloperlin@gmail.com
0 errors | 0 warnings | 0 notes
rnoaa (0.6.5)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: http://www.github.com/ropensci/rnoaa/issues
0 errors | 0 warnings | 0 notes
rnpn (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
0 errors | 0 warnings | 0 notes
rnrfa (1.2)
Maintainer: Claudia Vitolo cvitolodev@gmail.com Bug reports: https://github.com/cvitolo/rnrfa/issues
0 errors | 0 warnings | 0 notes
robCompositions (2.0.2)
Maintainer: Matthias Templ templ@tuwien.ac.at
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in warn_if_args_exist(list(...)) :
Extra arguments: 'colour', 'alpha', 'shape' are being ignored. If these are meant to be aesthetics, submit them using the 'mapping' variable within ggpairs with ggplot2::aes or ggplot2::aes_string.
Warning: `panel.margin` is deprecated. Please use `panel.spacing` property instead
Quitting from lines 905-906 (imputation.Rnw)
Error: processing vignette 'imputation.Rnw' failed with diagnostics:
only defined on a data frame with all numeric variables
Execution halted
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘StatDA’
robmed (0.1.1)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 0 notes
robustbase (0.92-6)
Maintainer: Martin Maechler maechler@stat.math.ethz.ch
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘robustX’
RobustEM (1.0)
Maintainer: Aishat Aloba adetokaloba@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
cluster_em_outlier: no visible global function definition for ‘qchisq’
jth_dsty: no visible global function definition for ‘mahalanobis’
k_means: no visible global function definition for ‘kmeans’
mix_rcm: no visible global function definition for ‘median’
Undefined global functions or variables:
kmeans mahalanobis median qchisq
Consider adding
importFrom("stats", "kmeans", "mahalanobis", "median", "qchisq")
to your NAMESPACE file.
robustHD (0.5.1)
Maintainer: Andreas Alfons alfons@ese.eur.nl
0 errors | 0 warnings | 0 notes
robustlmm (1.8)
Maintainer: Manuel Koller koller.manuel@gmail.com
0 errors | 0 warnings | 0 notes
rollply (0.5.0)
Maintainer: Alexandre Genin alex@lecairn.org Bug reports: https://github.com/alexgenin/rollply
0 errors | 0 warnings | 0 notes
ropenaq (0.1.3)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se Bug reports: http://github.com/ropenscilabs/ropenaq/issues
0 errors | 0 warnings | 0 notes
rorutadis (0.4.1)
Maintainer: Krzysztof Ciomek k.ciomek@gmail.com
0 errors | 0 warnings | 0 notes
rotations (1.5)
Maintainer: Bryan Stanfill bstanfill2003@gmail.com Bug reports: https://github.com/stanfill/rotationsC/issues
0 errors | 0 warnings | 0 notes
rpdo (0.2.0)
Maintainer: Joe Thorley joe@poissonconsulting.ca
0 errors | 0 warnings | 0 notes
rpf (0.53)
Maintainer: Joshua Pritikin jpritikin@pobox.com
0 errors | 0 warnings | 0 notes
rplexos (1.1.8)
Maintainer: Clayton Barrows clayton.barrows@nrel.gov Bug reports: https://github.com/NREL/rplexos/issues
0 errors | 0 warnings | 0 notes
rplos (0.6.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rplos/issues
0 errors | 0 warnings | 0 notes
RPPanalyzer (1.4.3)
Maintainer: Astrid Wachter astrid.wachter@med.uni-goettingen.de
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘limma’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
rPref (1.1)
Maintainer: Patrick Roocks mail@p-roocks.de
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘graph’ ‘Rgraphviz’
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
rprev (0.2.2)
Maintainer: Stuart Lacy stuart.lacy@york.ac.uk
0 errors | 0 warnings | 0 notes
rpsftm (1.0.1)
Maintainer: Simon Bond simon.bond@addenbrookes.nhs.uk
0 errors | 0 warnings | 0 notes
rrepast (0.5.0)
Maintainer: Antonio Prestes Garcia antonio.pgarcia@alumnos.upm.es
1 error | 0 warnings | 0 notes
checking whether package ‘rrepast’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rrepast.Rcheck/00install.out’ for details.
RSA (0.9.10)
Maintainer: Felix Schönbrodt felix@nicebread.de
0 errors | 1 warning | 0 notes
checking whether package ‘RSA’ can be installed ... WARNING
Found the following significant warnings:
Warning: loading Rplot failed
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/RSA.Rcheck/00install.out’ for details.
rSARP (1.0.0)
Maintainer: John Hutcheson jacknx8a@gmail.com
0 errors | 0 warnings | 0 notes
RSDA (1.3)
Maintainer: Oldemar Rodriguez oldemar.rodriguez@ucr.ac.cr
0 errors | 0 warnings | 0 notes
rSPACE (1.2.0)
Maintainer: Martha Ellis martha.ellis@gmail.com Bug reports: http://github.com/mmellis/rSPACE/issues
0 errors | 0 warnings | 0 notes
RSSL (0.6.1)
Maintainer: Jesse Krijthe jkrijthe@gmail.com Bug reports: http://www.github.com/jkrijthe/RSSL
0 errors | 0 warnings | 0 notes
rstan (2.12.1)
Maintainer: Ben Goodrich benjamin.goodrich@columbia.edu Bug reports: https://github.com/stan-dev/rstan/issues/
1 error | 0 warnings | 0 notes
checking whether package ‘rstan’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rstan.Rcheck/00install.out’ for details.
rstanarm (2.12.1)
Maintainer: Ben Goodrich benjamin.goodrich@columbia.edu Bug reports: https://github.com/stan-dev/rstanarm/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘rstanarm-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.stanreg
> ### Title: Plot method for stanreg objects
> ### Aliases: plot.stanreg
>
> ### ** Examples
... 75 lines ...
> # Intervals and point estimates
> plot(fit) +
+ ggplot2::ggtitle("Posterior medians \n with 80% and 95% credible intervals")
'pars' not specified. Showing first 10 parameters by default.
ci_level: 0.8 (80% intervals)
outer_level: 0.95 (95% intervals)
Error in if (e1$inherit.blank) return(e2) else return(e1) :
argument is of length zero
Calls: <Anonymous> ... FUN -> element_render -> calc_element -> Reduce -> f
Execution halted
** found \donttest examples: check also with --run-donttest
checking installed package size ... NOTE
installed size is 8.7Mb
sub-directories of 1Mb or more:
doc 1.3Mb
libs 6.6Mb
RStoolbox (0.1.6)
Maintainer: Benjamin Leutner benjamin.leutner@uni-wuerzburg.de Bug reports: https://github.com/bleutner/RStoolbox/issues
0 errors | 0 warnings | 0 notes
rsvd (0.6)
Maintainer: N. Benjamin Erichson nbe@st-andrews.ac.uk Bug reports: https://github.com/Benli11/rSVD
0 errors | 0 warnings | 0 notes
rsvg (1.0)
Maintainer: Jeroen Ooms jeroen.ooms@stat.ucla.edu Bug reports: https://github.com/jeroenooms/rsvg/issues
1 error | 0 warnings | 0 notes
checking whether package ‘rsvg’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/rsvg.Rcheck/00install.out’ for details.
rtematres (0.2)
Maintainer: Claas-Thido Pfaff claas-thido.pfaff@idiv-biodiversity.de
0 errors | 0 warnings | 0 notes
rtf (0.4-11)
Maintainer: Michael E. Schaffer mschaff@gmail.com
0 errors | 0 warnings | 2 notes
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
addHeader.RTF addNewLine.RTF addPageBreak.RTF addParagraph.RTF
addPlot.RTF addPng.RTF addSessionInfo.RTF addTOC.RTF addTable.RTF
addText.RTF addTrellisObject.RTF decreaseIndent.RTF done.RTF
endParagraph.RTF increaseIndent.RTF setFontSize.RTF
startParagraph.RTF view.RTF
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
.forest.plot: no visible global function definition for ‘par’
.forest.plot: no visible global function definition for ‘plot’
.forest.plot: no visible global function definition for ‘abline’
.forest.plot: no visible global function definition for ‘arrows’
.forest.plot: no visible global function definition for ‘points’
.forest.plot.scale: no visible global function definition for ‘par’
.forest.plot.scale: no visible global function definition for ‘plot’
.forest.plot.scale: no visible global function definition for ‘axTicks’
.forest.plot.scale : <anonymous>: no visible global function definition
... 9 lines ...
addSessionInfo.RTF: no visible global function definition for
‘sessionInfo’
Undefined global functions or variables:
abline arrows axTicks dev.off lines par plot png points sessionInfo
text
Consider adding
importFrom("grDevices", "dev.off", "png")
importFrom("graphics", "abline", "arrows", "axTicks", "lines", "par",
"plot", "points", "text")
importFrom("utils", "sessionInfo")
to your NAMESPACE file.
rtide (0.0.2)
Maintainer: Joe Thorley joe@poissonconsulting.ca Bug reports: https://github.com/poissonconsulting/rtide/issues
0 errors | 0 warnings | 0 notes
rtimes (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropengov/rtimes/issues
0 errors | 0 warnings | 0 notes
rtip (1.0.0)
Maintainer: Angel Berihuete angel.berihuete@uca.es
0 errors | 0 warnings | 0 notes
RtutoR (0.3)
Maintainer: Anup Nair nairanup50695@gmail.com
0 errors | 0 warnings | 0 notes
rvertnet (0.5.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rvertnet/issues
0 errors | 0 warnings | 0 notes
rWBclimate (0.1.3)
Maintainer: Edmund Hart edmund.m.hart@gmail.com Bug reports: http://github.com/ropensci/rWBclimate/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
check_ISO_code: no visible binding for global variable ‘NoAm_country’
check_ISO_code: no visible binding for global variable ‘SoAm_country’
check_ISO_code: no visible binding for global variable ‘Oceana_country’
check_ISO_code: no visible binding for global variable ‘Africa_country’
check_ISO_code: no visible binding for global variable ‘Asia_country’
check_ISO_code: no visible binding for global variable ‘Eur_country’
climate_map: no visible binding for global variable ‘data’
date_correct: no visible global function definition for ‘tail’
Undefined global functions or variables:
Africa_country Asia_country Eur_country NoAm_country Oceana_country
SoAm_country data tail
Consider adding
importFrom("utils", "data", "tail")
to your NAMESPACE file.
rwirelesscom (1.4.3)
Maintainer: Alberto Gutierrez algutier1@gmail.com
0 errors | 0 warnings | 0 notes
rwty (1.0.1)
Maintainer: Dan Warren dan.l.warren@gmail.com
0 errors | 0 warnings | 0 notes
ryouready (0.4)
Maintainer: Mark Heckmann heckmann.mark@gmail.com
0 errors | 0 warnings | 0 notes
Rz (0.9-1)
Maintainer: Masahiro Hayashi rinm884@gmail.com
0 errors | 1 warning | 2 notes
checking dependencies in R code ... WARNING
'library' or 'require' call to ‘vcd’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘foreign’ ‘ggplot2’ ‘grid’ ‘psych’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Unexported object imported by a ':::' call: ‘foreign:::adQuote’
See the note in ?`:::` about the use of this operator.
Including base/recommended package(s):
‘foreign’
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
summary.CrossTable
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
calc.hist.breaks: no visible global function definition for
‘nclass.Sturges’
calc.hist.breaks: no visible global function definition for ‘nclass.FD’
calc.hist.breaks: no visible global function definition for
‘nclass.scott’
check.class: no visible global function definition for ‘as.formula’
gtkColorSelectionForPlotGetColor: no visible global function definition
for ‘rgb’
gtkColorSelectionWidgetNew: no visible global function definition for
... 9 lines ...
write.spss: no visible global function definition for ‘write.table’
write.stata: no visible global function definition for ‘write.table’
Undefined global functions or variables:
addmargins as.formula assocstats colors localeToCharset nclass.FD
nclass.Sturges nclass.scott rgb theme_grey write.table
Consider adding
importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
"nclass.scott", "rgb")
importFrom("stats", "addmargins", "as.formula")
importFrom("utils", "localeToCharset", "write.table")
to your NAMESPACE file.
sadists (0.2.2)
Maintainer: Steven E. Pav shabbychef@gmail.com Bug reports: https://github.com/shabbychef/sadists/issues
0 errors | 0 warnings | 0 notes
saeRobust (0.1.0)
Maintainer: Sebastian Warnholz Sebastian.Warnholz@fu-berlin.de Bug reports: https://github.com/wahani/saeRobust/issues
0 errors | 0 warnings | 0 notes
saeSim (0.8.0)
Maintainer: Sebastian Warnholz Sebastian.Warnholz@fu-berlin.de Bug reports: https://github.com/wahani/saeSim/issues
0 errors | 0 warnings | 0 notes
SamplerCompare (1.2.7)
Maintainer: Madeleine Thompson madeleineth@gmail.com
0 errors | 0 warnings | 0 notes
sand (1.0.2)
Maintainer: Gabor Csardi csardi.gabor@gmail.com Bug reports: https://github.com/kolaczyk/sand/issues
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘GO.db’ ‘GOstats’ ‘org.Sc.sgd.db’
checking R code for possible problems ... NOTE
.run_chunk: no visible global function definition for ‘capture.output’
install_sand_packages: no visible global function definition for
‘packageDescription’
set_chapter: no visible global function definition for ‘sessionInfo’
Undefined global functions or variables:
capture.output packageDescription sessionInfo
Consider adding
importFrom("utils", "capture.output", "packageDescription",
"sessionInfo")
to your NAMESPACE file.
scanstatistics (0.1.0)
Maintainer: Benjamin Kjellson benjak@math.su.se Bug reports: https://github.com/BenjaK/scanstatistics/issues
0 errors | 0 warnings | 0 notes
scdhlm (0.3)
Maintainer: James Pustejovsky jepusto@gmail.com Bug reports: https://github.com/jepusto/scdhlm/issues
0 errors | 0 warnings | 0 notes
SCGLR (2.0.3)
Maintainer: Guillaume Cornu gcornu@cirad.fr
0 errors | 0 warnings | 0 notes
SciencesPo (1.4.1)
Maintainer: Daniel Marcelino dmarcelino@live.com Bug reports: http://github.com/danielmarcelino/SciencesPo/issues
0 errors | 0 warnings | 0 notes
scmamp (0.2.55)
Maintainer: Borja Calvo borja.calvo@ehu.eus Bug reports: https://github.com/b0rxa/scmamp/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘graph’ ‘Rgraphviz’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
SDaA (0.1-3)
Maintainer: Tobias Verbeke tobias.verbeke@openanalytics.eu
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
lahiri.design: no visible global function definition for ‘runif’
Undefined global functions or variables:
runif
Consider adding
importFrom("stats", "runif")
to your NAMESPACE file.
sdcMicro (4.6.1)
Maintainer: Matthias Templ matthias.templ@gmail.com
0 errors | 0 warnings | 0 notes
SDEFSR (0.7.1.0)
Maintainer: Angel M. Garcia amgv0009@red.ujaen.es
0 errors | 0 warnings | 0 notes
sdmvspecies (0.3.2)
Maintainer: Xiaoquan Kong u1mail2me@gmail.com Bug reports: https://github.com/howl-anderson/sdmvspecies/issues
0 errors | 0 warnings | 0 notes
season (0.3-5)
Maintainer: Adrian Barnett a.barnett@qut.edu.au
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
aaft: no visible global function definition for ‘rnorm’
aaft: no visible global function definition for ‘runif’
casecross: no visible global function definition for ‘as.formula’
casecross: no visible global function definition for ‘model.frame’
casecross: no visible binding for global variable ‘na.omit’
ciPhase: no visible global function definition for ‘quantile’
cipolygon: no visible global function definition for ‘polygon’
cosinor: no visible global function definition for ‘gaussian’
cosinor: no visible global function definition for ‘as.formula’
... 59 lines ...
qnorm quantile relevel resid residuals rgamma rnorm rug runif sd text
time
Consider adding
importFrom("grDevices", "gray")
importFrom("graphics", "axis", "box", "hist", "lines", "par", "plot",
"points", "polygon", "rug", "text")
importFrom("stats", "acf", "as.formula", "cpgram", "fitted",
"gaussian", "glm", "median", "model.frame", "na.omit",
"pchisq", "qchisq", "qnorm", "quantile", "relevel", "resid",
"residuals", "rgamma", "rnorm", "runif", "sd", "time")
to your NAMESPACE file.
SEERaBomb (2016.1)
Maintainer: Tomas Radivoyevitch radivot@ccf.org
1 error | 0 warnings | 0 notes
checking whether package ‘SEERaBomb’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/SEERaBomb.Rcheck/00install.out’ for details.
seewave (2.0.5)
Maintainer: Jerome Sueur sueur@mnhn.fr
1 error | 0 warnings | 0 notes
checking whether package ‘seewave’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/seewave.Rcheck/00install.out’ for details.
selfea (1.0.1)
Maintainer: Lang Ho Lee langholee@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
get_statistics_from_file: no visible global function definition for
‘read.csv’
glm_anova: no visible global function definition for ‘aov’
glm_anova: no visible global function definition for ‘glm’
glm_anova: no visible global function definition for ‘gaussian’
glm_anova: no visible global function definition for ‘anova’
glm_anova: no visible global function definition for ‘quasipoisson’
glm_anova: no visible global function definition for ‘sd’
glm_anova: no visible global function definition for ‘p.adjust’
ttest_cohens_d: no visible global function definition for ‘t.test’
ttest_cohens_d: no visible global function definition for ‘sd’
Undefined global functions or variables:
anova aov gaussian glm p.adjust quasipoisson read.csv sd t.test
Consider adding
importFrom("stats", "anova", "aov", "gaussian", "glm", "p.adjust",
"quasipoisson", "sd", "t.test")
importFrom("utils", "read.csv")
to your NAMESPACE file.
SemiParBIVProbit (3.8)
Maintainer: Giampiero Marra giampiero.marra@ucl.ac.uk
0 errors | 0 warnings | 0 notes
sensiPhy (0.5.0)
Maintainer: Gustavo Paterno paternogbc@gmail.com Bug reports: https://github.com/paternogbc/sensiPhy/issues
0 errors | 0 warnings | 0 notes
sensitivity (1.12.2)
Maintainer: Bertrand Iooss biooss@yahoo.fr
0 errors | 0 warnings | 0 notes
SensMixed (2.0-10)
Maintainer: Alexandra Kuznetsova alku@dtu.dk
0 errors | 0 warnings | 0 notes
SensusR (2.0.0)
Maintainer: Matthew S. Gerber gerber.matthew@gmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘SensusR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.LocationDatum
> ### Title: Plot location data.
> ### Aliases: plot.LocationDatum
>
> ### ** Examples
... 188 lines ...
[1] "57% done merging data for WlanDatum (4 of 7)."
[1] "71% done merging data for WlanDatum (5 of 7)."
[1] "85% done merging data for WlanDatum (6 of 7)."
[1] "100% done merging data for WlanDatum (7 of 7)."
[1] "Creating data frame for WlanDatum."
> plot(data$LocationDatum)
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=38.0676352725243,-78.9510441850485&zoom=10&size=640x640&scale=2&maptype=terrain&language=en-EN&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=38.0676352725243,-78.9510441850485&sensor=false
Error: GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
sentimentr (0.2.3)
Maintainer: Tyler Rinker tyler.rinker@gmail.com
0 errors | 0 warnings | 0 notes
SeqFeatR (0.2.4)
Maintainer: Bettina Budeus bettina.budeus@stud.uni-due.de
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘qvalue’ ‘widgetTools’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
sgd (1.1)
Maintainer: Dustin Tran dustin@cs.columbia.edu Bug reports: https://github.com/airoldilab/sgd/issues
0 errors | 0 warnings | 0 notes
sglr (0.7)
Maintainer: Balasubramanian Narasimhan naras@stat.stanford.edu
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
.computePStar: no visible global function definition for ‘uniroot’
plotBoundary: no visible global function definition for
‘scale_y_continuous’
Undefined global functions or variables:
scale_y_continuous uniroot
Consider adding
importFrom("stats", "uniroot")
to your NAMESPACE file.
shazam (0.1.4)
Maintainer: Jason Vander Heiden jason.vanderheiden@yale.edu Bug reports: https://bitbucket.org/kleinstein/shazam/issues
0 errors | 0 warnings | 0 notes
SHELF (1.2.1)
Maintainer: Jeremy Oakley j.oakley@sheffield.ac.uk Bug reports: https://github.com/OakleyJ/SHELF/issues
0 errors | 0 warnings | 0 notes
shiny (0.14.2)
Maintainer: Winston Chang winston@rstudio.com Bug reports: https://github.com/rstudio/shiny/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.2Mb
sub-directories of 1Mb or more:
www 6.1Mb
ShinyItemAnalysis (0.2.0)
Maintainer: Patricia Martinkova martinkova@cs.cas.cz
0 errors | 0 warnings | 0 notes
shinystan (2.2.1)
Maintainer: Jonah Gabry jsg2201@columbia.edu Bug reports: https://github.com/stan-dev/shinystan/issues/
0 errors | 0 warnings | 0 notes
sidier (3.0.1)
Maintainer: A.J. Muñoz-Pajares ajesusmp@ugr.es
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
BARRIEL: no visible global function definition for ‘write.table’
FIFTH: no visible global function definition for ‘write.table’
FindHaplo: no visible global function definition for ‘write.table’
HapPerPop: no visible global function definition for ‘read.table’
HapPerPop: no visible global function definition for ‘write.table’
MCIC: no visible global function definition for ‘write.table’
NINA.thr: no visible global function definition for ‘pdf’
NINA.thr: no visible global function definition for ‘dev.off’
NINA.thr: no visible global function definition for ‘write.table’
... 48 lines ...
zero.thr: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
as.dist colors dev.new dev.off layout lines mtext par pdf pie plot
png points read.table segments text write.table
Consider adding
importFrom("grDevices", "colors", "dev.new", "dev.off", "pdf", "png")
importFrom("graphics", "layout", "lines", "mtext", "par", "pie",
"plot", "points", "segments", "text")
importFrom("stats", "as.dist")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
sigmoid (0.2.0)
Maintainer: Bastiaan Quast bquast@gmail.com
0 errors | 0 warnings | 0 notes
Sim.DiffProc (3.4)
Maintainer: Arsalane Chouaib Guidoum acguidoum@usthb.dz
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Ecdat’, ‘PSM’, ‘fptdApprox’, ‘yuima’
simcausal (0.5.1)
Maintainer: Oleg Sofrygin oleg.sofrygin@gmail.com Bug reports: https://github.com/osofr/simcausal/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
node W1, order:1
node W2, order:2
node W3, order:3
...automatically assigning order attribute to some nodes...
node W1, order:1
node W2, order:2
...automatically assigning order attribute to some nodes...
... 8 lines ...
Attaching package: 'ggplot2'
The following object is masked _by_ '.GlobalEnv':
%+%
Loading required package: lattice
Quitting from lines 2415-2446 (simcausal_vignette.Rnw)
Error: processing vignette 'simcausal_vignette.Rnw' failed with diagnostics:
package 'survival' 2.39.5 was found, but >= 2.40.1 is required by 'Hmisc'
Execution halted
SimDesign (1.4)
Maintainer: Phil Chalmers rphilip.chalmers@gmail.com
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘doMPI’
simmer (3.5.0)
Maintainer: Iñaki Ucar i.ucar86@gmail.com Bug reports: https://github.com/r-simmer/simmer/issues
0 errors | 1 warning | 0 notes
checking compiled code ... WARNING
File ‘simmer/libs/simmer.so’:
Found ‘_abort’, possibly from ‘abort’ (C)
Objects: ‘process.o’, ‘resource.o’, ‘simmer_rcpp.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
simmr (0.3)
Maintainer: Andrew Parnell andrew.parnell@ucd.ie
1 error | 0 warnings | 0 notes
checking whether package ‘simmr’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/simmr.Rcheck/00install.out’ for details.
simPH (1.3.9)
Maintainer: Christopher Gandrud christopher.gandrud@gmail.com Bug reports: https://github.com/christophergandrud/simPH/issues
0 errors | 0 warnings | 0 notes
simstudy (0.1.1)
Maintainer: Keith Goldfeld Keith.Goldfeld@nyumc.org
0 errors | 0 warnings | 0 notes
simTool (1.0.3)
Maintainer: Marsel Scheer scheer@freescience.de
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking R code for possible problems ... NOTE
evalGrids: no visible global function definition for ‘sessionInfo’
meanAndNormCI: no visible global function definition for ‘sd’
Undefined global functions or variables:
sd sessionInfo
Consider adding
importFrom("stats", "sd")
importFrom("utils", "sessionInfo")
to your NAMESPACE file.
simulator (0.2.0)
Maintainer: Jacob Bien jbien@cornell.edu Bug reports: http://github.com/jacobbien/simulator/issues
0 errors | 0 warnings | 0 notes
sitmo (1.0.0)
Maintainer: James Balamuta balamut2@illinois.edu Bug reports: https://github.com/coatless/sitmo/issues
0 errors | 0 warnings | 0 notes
SixSigma (0.9-3)
Maintainer: Emilio L. Cano emilio.lopez@urjc.es
0 errors | 0 warnings | 0 notes
sjPlot (2.1.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de Bug reports: https://github.com/sjPlot/devel/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘sjPlot-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sjp.scatter
> ### Title: Plot (grouped) scatter plots
> ### Aliases: sjp.scatter
>
> ### ** Examples
... 37 lines ...
> sjp.scatter(efc$c160age, efc$e17age, efc$e42dep, title = "",
+ axis.titles = c("", ""))
>
> # plot text labels
> pl <- c(1:10)
> for (i in 1:10)
+ pl[i] <- paste(sample(c(0:9, letters, LETTERS), 8, replace = TRUE), collapse = "")
> sjp.scatter(runif(10), runif(10), dot.labels = pl)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
sjstats (0.6.0)
Maintainer: Daniel Lüdecke d.luedecke@uke.de Bug reports: https://github.com/sjPlot/sjstats/issues
0 errors | 0 warnings | 0 notes
slackr (1.4.2)
Maintainer: Bob Rudis bob@rudis.net Bug reports: https://github.com/hrbrmstr/slackr/issues
0 errors | 0 warnings | 0 notes
slim (0.1.0)
Maintainer: Daniel Farewell farewelld@cf.ac.uk
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 182-190 (slim.Rmd)
Error: processing vignette 'slim.Rmd' failed with diagnostics:
there is no package called 'jmcm'
Execution halted
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘jmcm’ ‘gee’
SmarterPoland (1.7)
Maintainer: Przemyslaw Biecek przemyslaw.biecek@gmail.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 8.2Mb
sub-directories of 1Mb or more:
data 8.1Mb
SMFI5 (1.0)
Maintainer: Bruno Remillard bruno.remillard@hec.ca
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘ggplot2’ ‘reshape’
Please remove these calls from your code.
Packages in Depends field not imported from:
‘corpcor’ ‘ggplot2’ ‘reshape’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
LogLikCIR: no visible global function definition for ‘head’
LogLikCIR: no visible global function definition for ‘dchisq’
LogLikFeller: no visible global function definition for ‘head’
LogLikFeller: no visible global function definition for ‘dchisq’
LogLikOU: no visible global function definition for ‘head’
LogLikVasicek: no visible global function definition for ‘head’
bond.cir: no visible global function definition for ‘melt’
bond.cir: no visible global function definition for ‘ggplot’
bond.cir: no visible global function definition for ‘aes’
... 59 lines ...
sim.vasicek: no visible global function definition for ‘geom_line’
sim.vasicek: no visible global function definition for ‘ggtitle’
Undefined global functions or variables:
acf aes cor cov dchisq geom_line ggplot ggtitle head melt optim plot
pseudoinverse qnorm rchisq rnorm rpois sd title
Consider adding
importFrom("graphics", "plot", "title")
importFrom("stats", "acf", "cor", "cov", "dchisq", "optim", "qnorm",
"rchisq", "rnorm", "rpois", "sd")
importFrom("utils", "head")
to your NAMESPACE file.
smoof (1.4)
Maintainer: Jakob Bossek j.bossek@gmail.com Bug reports: https://github.com/jakobbossek/smoof/issues
0 errors | 0 warnings | 0 notes
snht (1.0.4)
Maintainer: Josh Browning rockclimber112358@gmail.com
0 errors | 0 warnings | 0 notes
snpEnrichment (1.7.0)
Maintainer: Mickael Canouil mickael.canouil@cnrs.fr Bug reports: https://github.com/mcanouil/snpEnrichment/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘snpStats’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
soc.ca (0.7.3)
Maintainer: Anton Grau Larsen agl.dbp@cbs.dk
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘soc.ca-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add.to.label
> ### Title: Add values to label
> ### Aliases: add.to.label
>
> ### ** Examples
... 75 lines ...
[10] "Film:\n Comedy" "Film:\n CostumeDrama" "Film:\n Documentary"
[13] "Film:\n Horror" "Film:\n Musical" "Film:\n Romance"
[16] "Film:\n SciFi" "Art:\n Impressionism" "Art:\n Landscape"
[19] "Art:\n ModernArt" "Art:\n PerformanceArt" "Art:\n Portrait"
[22] "Art:\n RenaissanceArt" "Art:\n StillLife" "Eat:\n Fish&Chips"
[25] "Eat:\n FrenchRest" "Eat:\n IndianRest" "Eat:\n ItalianRest"
[28] "Eat:\n Pub" "Eat:\n SteakHouse"
> map.ctr(result.label)
Error: GeomTextRepel was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
Sofi (0.16.4.8)
Maintainer: Jose D. Loera jose.loera@inegi.org.mx Bug reports: https://github.com/loerasg/Sofi/issues
0 errors | 0 warnings | 0 notes
solarius (0.3.0.2)
Maintainer: Andrey Ziyatdinov andrey.ziyatdinov@upc.edu
0 errors | 0 warnings | 0 notes
sorvi (0.7.26)
Maintainer: Leo Lahti louhos@googlegroups.com Bug reports: https://github.com/ropengov/sorvi/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
convert_municipality_names: no visible global function definition for
‘read.csv’
regression_plot: no visible binding for global variable ‘loess’
regression_plot: no visible global function definition for
‘colorRampPalette’
regression_plot: no visible global function definition for
‘loess.control’
regression_plot: no visible global function definition for ‘predict’
regression_plot : <anonymous>: no visible global function definition
for ‘quantile’
regression_plot : <anonymous>: no visible global function definition
for ‘pnorm’
regression_plot: no visible global function definition for
‘flush.console’
regression_plot: no visible global function definition for ‘density’
Undefined global functions or variables:
colorRampPalette density flush.console loess loess.control pnorm
predict quantile read.csv
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("stats", "density", "loess", "loess.control", "pnorm",
"predict", "quantile")
importFrom("utils", "flush.console", "read.csv")
to your NAMESPACE file.
sotkanet (0.9.21)
Maintainer: Leo Lahti louhos@googlegroups.com Bug reports: https://github.com/ropengov/sotkanet/issues
0 errors | 0 warnings | 0 notes
sourceR (0.2.0)
Maintainer: Poppy Miller p.miller@lancaster.ac.uk
0 errors | 0 warnings | 0 notes
SpaDES (1.3.1)
Maintainer: Alex M Chubaty alexander.chubaty@canada.ca Bug reports: https://github.com/PredictiveEcology/SpaDES/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘fastshp’
sparkTable (1.2.0)
Maintainer: Alexander Kowarik alexander.kowarik@statistik.gv.at Bug reports: https://github.com/alexkowa/sparkTable/issues
1 error | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘sparkTable-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot-methods
> ### Title: Plot objects of class 'sparkline', 'sparkbar', 'sparkhist' or
> ### 'sparkbox'
> ### Aliases: plot plot-methods plot,sparkbar-method plot,sparkbox-method
> ### plot,sparkline-method plot,sparkhist-method
>
> ### ** Examples
>
> data(pop)
> x <- pop[pop[,2]=="Insgesamt",3]
> a <- newSparkLine(values=x, pointWidth=8)
> plot(a)
Error in theme(legend.position = "none", line = element_blank(), text = element_blank(), :
formal argument "axis.ticks" matched by multiple actual arguments
Calls: plot -> plot -> theme
Execution halted
checking R code for possible problems ... NOTE
plot,sparkbar: possible error in theme(legend.position = "none", line =
element_blank(), text = element_blank(), title = element_blank(),
axis.line = element_blank(), axis.ticks = element_blank(),
legend.background = element_rect(fill = "white", colour = NA),
plot.background = element_blank(), strip.background =
element_rect(fill = "white", colour = "white"), panel.margin =
unit(0, "null"), plot.margin = rep(unit(0, "null"), 4), panel.grid =
element_blank(), axis.ticks = element_blank(), axis.ticks.length =
unit(0, "null"), axis.text.x = element_blank(), : formal argument
... 33 lines ...
axis.line = element_blank(), axis.ticks = element_blank(),
legend.background = element_rect(fill = "white", colour = NA),
plot.background = element_blank(), strip.background =
element_rect(fill = "white", colour = "white"), panel.margin =
unit(0, "null"), plot.margin = rep(unit(0, "null"), 4), panel.grid =
element_blank(), axis.ticks = element_blank(), axis.ticks.length =
unit(0, "null"), axis.text.x = element_blank(), : formal argument
"axis.ticks" matched by multiple actual arguments
plot,sparkline: possible error in axis.text.y = element_blank(),
panel.background = element_rect(fill = allColors(x)[4])): formal
argument "axis.ticks" matched by multiple actual arguments
sparsediscrim (0.2.3)
Maintainer: John A. Ramey johnramey@gmail.com
0 errors | 0 warnings | 0 notes
SparseFactorAnalysis (1.0)
Maintainer: Marc Ratkovic ratkovic@princeton.edu
0 errors | 0 warnings | 0 notes
sparsereg (1.2)
Maintainer: Marc Ratkovic ratkovic@princeton.edu
0 errors | 0 warnings | 0 notes
sparsevar (0.0.9)
Maintainer: Simone Vazzoler svazzole@gmail.com Bug reports: http://github.com/svazzole/sparsevar
0 errors | 0 warnings | 0 notes
spatialClust (1.1.1)
Maintainer: Imam Habib Pamungkas imamhabibpamungkas@gmail.com
0 errors | 0 warnings | 0 notes
spbabel (0.4.5)
Maintainer: Michael D. Sumner mdsumner@gmail.com Bug reports: https://github.com/mdsumner/spbabel/issues
0 errors | 0 warnings | 0 notes
spcosa (0.3-6)
Maintainer: Dennis Walvoort dennis.Walvoort@wur.nl
1 error | 0 warnings | 0 notes
checking whether package ‘spcosa’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/spcosa.Rcheck/00install.out’ for details.
specmine (1.0)
Maintainer: Christopher Costa chrisbcl@hotmail.com
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘xcms’ ‘MAIT’ ‘genefilter’ ‘impute’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
spef (1.0-1)
Maintainer: Sy Han (Steven) Chiou schiou@hsph.harvard.edu
0 errors | 0 warnings | 0 notes
spikeSlabGAM (1.1-11)
Maintainer: Fabian Scheipl fabian.scheipl@stat.uni-muenchen.de
0 errors | 0 warnings | 0 notes
SPOT (1.1.0)
Maintainer: Martin Zaefferer martin.zaefferer@gmx.de
0 errors | 0 warnings | 0 notes
sprm (1.2.2)
Maintainer: Irene Hoffmann irene.hoffmann@tuwien.ac.at
0 errors | 0 warnings | 0 notes
squid (0.1.1)
Maintainer: Hassen Allegue hassen.allegue@gmail.com Bug reports: https://github.com/hallegue/squid/issues
0 errors | 0 warnings | 0 notes
srvyr (0.2.0)
Maintainer: Greg Freedman Ellis greg.freedman@gmail.com Bug reports: https://github.com/gergness/srvyr/issues
0 errors | 0 warnings | 0 notes
ss3sim (0.9.2)
Maintainer: Sean Anderson sean@seananderson.ca
0 errors | 0 warnings | 0 notes
starma (1.3)
Maintainer: Felix Cheysson felix@cheysson.fr
0 errors | 0 warnings | 0 notes
starmie (0.1.2)
Maintainer: Stuart Lee lee.s@wehi.edu.au Bug reports: https://github.com/sa-lee/starmie/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘iterpc’ ‘label.switching’ ‘MCL’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
statar (0.6.2)
Maintainer: Matthieu Gomez mattg@princeton.edu Bug reports: https://github.com/matthieugomez/statar/issues
0 errors | 0 warnings | 0 notes
statcheck (1.2.2)
Maintainer: Michele B. Nuijten m.b.nuijten@uvt.nl
0 errors | 0 warnings | 0 notes
statebins (1.2.2)
Maintainer: Bob Rudis bob@rudis.net Bug reports: https://github.com/hrbrmstr/statebins/issues
0 errors | 0 warnings | 0 notes
StatRank (0.0.6)
Maintainer: Hossein Azari Soufiani azari.hossein@gmail.com
0 errors | 0 warnings | 0 notes
strataG (1.0.5)
Maintainer: Eric Archer eric.archer@noaa.gov Bug reports: https://github.com/EricArcher/strataG/issues
0 errors | 0 warnings | 0 notes
StroupGLMM (0.1.0)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
1 error | 0 warnings | 0 notes
checking whether package ‘StroupGLMM’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/StroupGLMM.Rcheck/00install.out’ for details.
structSSI (1.1.1)
Maintainer: Kris Sankaran kriss1@stanford.edu
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
Package suggested but not available for checking: ‘phyloseq’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
strvalidator (1.8.0)
Maintainer: Oskar Hansson oskar.hansson@fhi.no Bug reports: https://github.com/OskarHansson/strvalidator/issues
1 error | 0 warnings | 0 notes
checking whether package ‘strvalidator’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/strvalidator.Rcheck/00install.out’ for details.
subspaceMOA (0.5.1)
Maintainer: Marwan Hassani rsubspace@cs.rwth-aachen.de
1 error | 0 warnings | 0 notes
checking whether package ‘subspaceMOA’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/subspaceMOA.Rcheck/00install.out’ for details.
SuperLearner (2.0-19)
Maintainer: Eric Polley polley.eric@mayo.edu
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘genefilter’ ‘sva’
surveillance (1.12.1)
Maintainer: Sebastian Meyer Sebastian.Meyer@ifspm.uzh.ch Bug reports: https://r-forge.r-project.org/tracker/?group_id=45
0 errors | 1 warning | 2 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
glrnb: Fitting Poisson model because alpha == 0
... 8 lines ...
Loading required package: parallel
********** GAMLSS Version 5.0-0 **********
For more on GAMLSS look at http://www.gamlss.org/
Type gamlssNews() to see new features/changes/bug fixes.
Error: processing vignette 'monitoringCounts.Rnw' failed with diagnostics:
chunk 17 (label = fPlot1)
Error in theme(axis.line = element_blank(), panel.grid.major = element_blank(), :
formal argument "axis.line" matched by multiple actual arguments
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘INLA’
checking installed package size ... NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
doc 2.2Mb
survminer (0.2.2)
Maintainer: Alboukadel Kassambara alboukadel.kassambara@gmail.com Bug reports: https://github.com/kassambara/survminer/issues
1 error | 2 warnings | 1 note
checking examples ... ERROR
Running examples in ‘survminer-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ggsurvplot
> ### Title: Drawing Survival Curves Using ggplot2
> ### Aliases: ggsurvplot print.ggsurvplot
>
> ### ** Examples
... 51 lines ...
>
> # Use brewer color palette "Dark2"
> # Add risk table
> ggsurvplot(fit, linetype = "strata",
+ conf.int = TRUE, pval = TRUE,
+ palette = "Dark2", risk.table = TRUE)
Warning in is.na(x) :
is.na() applied to non-(list or vector) of type 'NULL'
Error in -x : invalid argument to unary operator
Calls: ggsurvplot ... summary.survfit -> findrow -> find2 -> findInterval
Execution halted
checking Rd cross-references ... WARNING
Missing link or links in documentation object 'ggcoxdiagnostics.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggcoxfunctional.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggcoxzph.Rd':
‘ggtheme’
Missing link or links in documentation object 'ggsurvplot.Rd':
‘ggtheme’
See section 'Cross-references' in the 'Writing R Extensions' manual.
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: ggplot2
Quitting from lines 55-64 (Informative_Survival_Plots.Rmd)
Error: processing vignette 'Informative_Survival_Plots.Rmd' failed with diagnostics:
there is no package called 'RTCGA.clinical'
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RTCGA.clinical’
survMisc (0.5.3)
Maintainer: Chris Dardis christopherdardis@gmail.com Bug reports: https://github.com/dardisco/survMisc/issues
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘survMisc-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: autoplotTableAndPlot
> ### Title: Arrange a survival plot with corresponding table and legend.
> ### Aliases: autoplot.tableAndPlot autoplotTableAndPlot
> ### Keywords: graphics
>
> ### ** Examples
>
> data("kidney", package="KMsurv")
> autoplot(survfit(Surv(time, delta) ~ type, data=kidney), type="fill")
Warning: Ignoring unknown aesthetics: x, y
Warning: Ignoring unknown aesthetics: x, y
Error in if (is.nan(times1[1])) times1 <- times :
argument is of length zero
Calls: autoplot -> autoplot.survfit
Execution halted
SurvRank (0.1)
Maintainer: Michael Laimighofer michael.laimighofer@helmholtz-muenchen.de
0 errors | 0 warnings | 0 notes
sValues (0.1.4)
Maintainer: Carlos Cinelli carloscinelli@hotmail.com Bug reports: https://github.com/carloscinelli/sValues
0 errors | 0 warnings | 0 notes
svdvis (0.1)
Maintainer: Neo Christopher Chung nchchung@gmail.com
0 errors | 0 warnings | 0 notes
swfscMisc (1.2)
Maintainer: Eric Archer eric.archer@noaa.gov Bug reports: https://github.com/EricArcher/swfscMisc/issues
0 errors | 0 warnings | 0 notes
SWMPr (2.1.7)
Maintainer: Marcus W. Beck mbafs2012@gmail.com Bug reports: https://github.com/fawda123/SWMPr/issues
0 errors | 0 warnings | 0 notes
synthpop (1.3-0)
Maintainer: Beata Nowok beata.nowok@gmail.com
0 errors | 0 warnings | 0 notes
tableone (0.7.3)
Maintainer: Kazuki Yoshida kazukiyoshida@mail.harvard.edu
0 errors | 0 warnings | 0 notes
tabplot (1.3)
Maintainer: Martijn Tennekes mtennekes@gmail.com
1 error | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘tabplot-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tableplot
> ### Title: Create a tableplot
> ### Aliases: tableplot
> ### Keywords: visualization
>
... 41 lines ...
font width unknown for character 0x9
>
> # create a tableplot cut category, and fix scale limits of carat, table, and price
> tabs <- tableplot(p, subset=cut,
+ limitsX=list(carat=c(0,4), table=c(55, 65), price=c(0, 20000)), plot=FALSE)
Error in if (dfile == getOption("fftempdir")) finalizer <- "delete" else finalizer <- "close" :
argument is of length zero
Calls: tableplot ... clone.ffdf -> lapply -> FUN -> clone.ff -> assign -> ff
Error in setwd(cwd) : character argument expected
Calls: tableplot ... clone.ffdf -> lapply -> FUN -> clone.ff -> assign -> ff -> setwd
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Quitting from lines 27-39 (tabplot-timings.Rmd)
Error: processing vignette 'tabplot-timings.Rmd' failed with diagnostics:
(list) object cannot be coerced to type 'double'
Execution halted
tadaatoolbox (0.10.0)
Maintainer: Lukas Burk lukas@quantenbrot.de Bug reports: https://github.com/tadaadata/tadaatoolbox/issues
0 errors | 0 warnings | 0 notes
taRifx (1.0.6)
Maintainer: Ari B. Friedman abfriedman@gmail.com
0 errors | 0 warnings | 4 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘gdata’ ‘ggplot2’ ‘grid’ ‘lattice’ ‘xtable’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
as.matrix.by stack.list
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
checking R code for possible problems ... NOTE
as.data.frame.by: no visible global function definition for ‘na.omit’
autoplot.microbenchmark : uq: no visible global function definition for
‘quantile’
autoplot.microbenchmark : lq: no visible global function definition for
‘quantile’
autoplot.microbenchmark: no visible global function definition for
‘ggplot’
autoplot.microbenchmark: no visible global function definition for
‘aes’
... 90 lines ...
grid.points grid.polyline grid.rect grid.segments grid.text
interleave label<- latticeParseFormula median na.omit opts
panel.densityplot panel.lines panel.xyplot par pf plot.new
popViewport pushViewport quantile sd seekViewport stat_summary terms
text theme_text time unit upViewport viewport write.csv xtable
Consider adding
importFrom("graphics", "barplot", "par", "plot.new", "text")
importFrom("stats", "ecdf", "median", "na.omit", "pf", "quantile",
"sd", "terms", "time")
importFrom("utils", "write.csv")
to your NAMESPACE file.
TcGSA (0.10.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu Bug reports: https://github.com/borishejblum/TcGSA/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘multtest’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
tcgsaseq (1.0.1)
Maintainer: Boris P. Hejblum bhejblum@hsph.harvard.edu Bug reports: https://github.com/denisagniel/tcgsaseq/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘tcgsaseq-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: voom_weights
> ### Title: Precision weights accounting for heteroscedasticity in RNA-seq
> ### count data
> ### Aliases: voom_weights
>
... 7 lines ...
> n <- 12
> p <- 2
> y <- t(sapply(1:G, FUN=function(x){rnbinom(n=n, size=0.07, mu=200)}))
>
> x <- sapply(1:p, FUN=function(x){rnorm(n=n, mean=n, sd=1)})
>
> my_w <- voom_weights(y, x, doPlot=TRUE)
> w_voom <- limma::voom(counts=y, design=x, plot=TRUE) #slightly faster than us. Same results
Error in loadNamespace(name) : there is no package called ‘limma’
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘limma’
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘limma’
tcR (2.2.1.11)
Maintainer: Vadim Nazarov vdm.nazarov@gmail.com Bug reports: https://github.com/imminfo/tcr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
data 1.2Mb
doc 3.9Mb
tdr (0.11)
Maintainer: Oscar Perpinan Lamigueiro oscar.perpinan@gmail.com Bug reports: https://github.com/oscarperpinan/tdr/issues
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
makeCircles: no visible global function definition for ‘quantile’
targetDiagram: no visible global function definition for ‘as.formula’
targetDiagram: no visible global function definition for ‘modifyList’
targetDiagram: no visible global function definition for ‘extendrange’
tdStats : sdo: no visible global function definition for ‘sd’
tdStats : sdm: no visible global function definition for ‘sd’
tdStats : r2: no visible global function definition for ‘cor’
Undefined global functions or variables:
as.formula cor extendrange modifyList quantile sd
Consider adding
importFrom("grDevices", "extendrange")
importFrom("stats", "as.formula", "cor", "quantile", "sd")
importFrom("utils", "modifyList")
to your NAMESPACE file.
TELP (1.0)
Maintainer: Gabriel Henrique Oliveira Assuncao gabrielhenryoliver@hotmail.com
1 error | 0 warnings | 0 notes
checking examples ... ERROR
Running examples in ‘TELP-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: telp
> ### Title: The Base Function of This Package The Free Evocation of Words
> ### Technique
> ### Aliases: telp
> ### Keywords: function
>
> ### ** Examples
>
> telp()
Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
[tcl] invalid command name "toplevel".
Calls: telp ... tktoplevel -> tkwidget -> tcl -> .Tcl.objv -> structure
Execution halted
texmexseq (0.3)
Maintainer: Scott Olesen swo@mit.edu
0 errors | 0 warnings | 0 notes
Thermimage (2.2.3)
Maintainer: Glenn J. Tattersall gtatters@brocku.ca Bug reports: http://github.com/gtatters/Thermimage/issues
0 errors | 0 warnings | 0 notes
thief (0.2)
Maintainer: Rob Hyndman Rob.Hyndman@monash.edu Bug reports: https://github.com/robjhyndman/thief/issues
0 errors | 0 warnings | 0 notes
tidyjson (0.2.1)
Maintainer: Jeremy Stanley jeremy.stanley@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
read_json: no visible global function definition for ‘tail’
Undefined global functions or variables:
tail
Consider adding
importFrom("utils", "tail")
to your NAMESPACE file.
tidytext (0.1.2)
Maintainer: Julia Silge julia.silge@gmail.com Bug reports: http://github.com/juliasilge/tidytext/issues
0 errors | 0 warnings | 0 notes
tidyverse (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/tidyverse/issues
0 errors | 0 warnings | 0 notes
tigerstats (0.2.7)
Maintainer: Homer White hwhite0@georgetowncollege.edu
0 errors | 0 warnings | 0 notes
tigger (0.2.8)
Maintainer: Daniel Gadala-Maria daniel.gadala-maria@yale.edu Bug reports: https://bitbucket.org/kleinstein/tigger/issues
0 errors | 0 warnings | 0 notes
tigris (0.3.3)
Maintainer: Kyle Walker kyle.walker@tcu.edu
0 errors | 0 warnings | 0 notes
tikzDevice (0.10-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org Bug reports: https://github.com/yihui/tikzDevice/issues
0 errors | 0 warnings | 0 notes
timeit (0.2.1)
Maintainer: Kevin Ushey kevinushey@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘ggplot2’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘microbenchmark’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
determine_replications: no visible global function definition for
‘microbenchmark’
do_timeit: no visible global function definition for ‘Rprof’
do_timeit: no visible global function definition for ‘summaryRprof’
mean.timeit: no visible global function definition for ‘aggregate’
plot.timeit: no visible global function definition for ‘ggplot’
plot.timeit: no visible global function definition for ‘aes’
plot.timeit: no visible global function definition for ‘geom_boxplot’
plot.timeit: no visible global function definition for ‘geom_point’
plot.timeit: no visible global function definition for ‘xlab’
plot.timeit: no visible global function definition for ‘ylab’
plot.timeit: no visible global function definition for ‘ggtitle’
plot.timeit: no visible global function definition for ‘coord_flip’
timeit: no visible binding for global variable ‘median’
Undefined global functions or variables:
Rprof aes aggregate coord_flip geom_boxplot geom_point ggplot ggtitle
median microbenchmark summaryRprof xlab ylab
Consider adding
importFrom("stats", "aggregate", "median")
importFrom("utils", "Rprof", "summaryRprof")
to your NAMESPACE file.
timeline (0.9)
Maintainer: Jason Bryer jason@bryer.org Bug reports: https://github.com/jbryer/timeline/issues
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘shiny’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘ggplot2’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
timeline: no visible global function definition for ‘ggplot’
timeline: no visible global function definition for ‘geom_segment’
timeline: no visible global function definition for ‘aes_string’
timeline: no visible global function definition for ‘geom_rect’
timeline: no visible global function definition for ‘geom_text’
timeline: no visible global function definition for ‘theme’
timeline: no visible global function definition for ‘element_blank’
timeline: no visible global function definition for ‘xlab’
timeline: no visible global function definition for ‘ylab’
timeline: no visible global function definition for ‘xlim’
timeline: no visible global function definition for
‘scale_y_continuous’
timeline: no visible global function definition for ‘geom_point’
timeline: no visible global function definition for ‘scale_color_grey’
timeline: no visible global function definition for ‘geom_hline’
Undefined global functions or variables:
aes_string element_blank geom_hline geom_point geom_rect geom_segment
geom_text ggplot scale_color_grey scale_y_continuous theme xlab xlim
ylab
timelineS (0.1.1)
Maintainer: Dahee Lee dhlee99@gmail.com Bug reports: https://github.com/daheelee/timelineS/issues
0 errors | 0 warnings | 0 notes
TimeProjection (0.2.0)
Maintainer: Jeffrey Wong jeff.ct.wong@gmail.com
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ggplot2’ ‘plyr’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘Matrix’ ‘lubridate’ ‘timeDate’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
is.Bizday: no visible global function definition for ‘isWeekday’
plotCalendarHeatmap: no visible global function definition for ‘ddply’
plotCalendarHeatmap: no visible global function definition for ‘.’
plotCalendarHeatmap: no visible binding for global variable ‘year’
plotCalendarHeatmap: no visible binding for global variable ‘month’
plotCalendarHeatmap: no visible binding for global variable ‘week’
plotCalendarHeatmap: no visible global function definition for ‘ggplot’
plotCalendarHeatmap: no visible global function definition for ‘aes’
plotCalendarHeatmap: no visible binding for global variable ‘monthweek’
plotCalendarHeatmap: no visible binding for global variable ‘weekday’
plotCalendarHeatmap: no visible global function definition for
‘geom_tile’
plotCalendarHeatmap: no visible global function definition for
‘facet_grid’
plotCalendarHeatmap: no visible global function definition for
‘scale_fill_gradientn’
projectDate: no visible global function definition for ‘holidayNYSE’
projectDate: no visible global function definition for
‘sparse.model.matrix’
Undefined global functions or variables:
. aes ddply facet_grid geom_tile ggplot holidayNYSE isWeekday month
monthweek scale_fill_gradientn sparse.model.matrix week weekday year
TippingPoint (1.1.0)
Maintainer: Xikun Han hanxikun2014@163.com
0 errors | 0 warnings | 0 notes
tmap (1.6-1)
Maintainer: Martijn Tennekes mtennekes@gmail.com Bug reports: https://github.com/mtennekes/tmap/issues
0 errors | 0 warnings | 0 notes
Tmisc (0.1.10)
Maintainer: Stephen Turner vustephen@gmail.com
0 errors | 0 warnings | 0 notes
toaster (0.5.4)
Maintainer: Gregory Kanevsky gregory.kanevsky@teradata.com Bug reports: https://github.com/teradata-aster-field/toaster/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Package required but not available: ‘RODBC’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
tourr (0.5.4)
Maintainer: Hadley Wickham h.wickham@gmail.com Bug reports: https://github.com/ggobi/tourr/
0 errors | 0 warnings | 2 notes
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘TeachingDemos’ ‘ash’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
checking R code for possible problems ... NOTE
animate: no visible global function definition for ‘dev.hold’
animate: no visible global function definition for ‘dev.flush’
animate : <anonymous>: no visible global function definition for
‘dev.flush’
animate_stereo: no visible global function definition for ‘rgb’
bases_little: no visible global function definition for ‘combn’
basis_random: no visible global function definition for ‘rnorm’
blank_plot: no visible global function definition for ‘par’
blank_plot: no visible global function definition for ‘plot’
... 88 lines ...
stars step str text
Consider adding
importFrom("grDevices", "dev.cur", "dev.flush", "dev.hold", "dev.off",
"hcl", "rgb")
importFrom("graphics", "abline", "axis", "box", "hist", "image",
"lines", "pairs", "par", "plot", "points", "polygon",
"rect", "segments", "stars", "text")
importFrom("stats", "aov", "as.dist", "density", "manova", "optimize",
"prcomp", "predict", "rnorm", "runif", "step")
importFrom("utils", "capture.output", "combn", "data", "str")
to your NAMESPACE file.
tourrGui (0.4)
Maintainer: Dianne Cook dicook@iastate.edu
0 errors | 0 warnings | 4 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rggobi’
checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
MIT
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
‘Cairo’ ‘RGtk2’ ‘colorspace’ ‘gWidgets’ ‘tourr’
Please remove these calls from your code.
'library' or 'require' calls in package code:
‘TeachingDemos’ ‘ash’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
‘Cairo’ ‘RGtk2’ ‘colorspace’ ‘gWidgets’ ‘tourr’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
checking R code for possible problems ... NOTE
.create_1d_tour: no visible global function definition for ‘gmessage’
.create_1d_tour: no visible global function definition for
‘display_dist’
.create_1d_tour: no visible global function definition for ‘grand_tour’
.create_1d_tour: no visible global function definition for
‘little_tour’
.create_1d_tour: no visible global function definition for
‘guided_tour’
.create_1d_tour: no visible binding for global variable ‘holes’
... 703 lines ...
display_scatmat display_stars display_stereo display_xy dispose
find_platform flea gIdleAdd gbutton gcheckbox gcheckboxgroup
gdroplist ggroup glayout gmessage gnotebook gradio grand_tour gslider
gtable gtkIdleRemove guided_tour gwindow holes lda_pp little_tour
local_tour ozone par pda_pp rainbow_hcl rescale rgb sphere svalue
svalue<- tooltip<- visible<-
Consider adding
importFrom("grDevices", "dev.control", "dev.cur", "dev.list",
"dev.new", "rgb")
importFrom("graphics", "par")
to your NAMESPACE file.
toxboot (0.1.1)
Maintainer: Eric D. Watt eric@ericdwatt.com Bug reports: https://github.com/ericwatt/toxboot/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rmongodb’
trackeR (0.0.4)
Maintainer: Hannah Frick h.frick@ucl.ac.uk Bug reports: https://github.com/hfrick/trackeR/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: zoo
Attaching package: 'zoo'
The following objects are masked from 'package:base':
as.Date, as.Date.numeric
Loading required package: ggplot2
Attaching package: 'trackeR'
The following object is masked from 'package:base':
append
Map from URL : http://maps.googleapis.com/maps/api/staticmap?center=57.157231,-2.104296&zoom=13&size=640x640&scale=2&maptype=terrain&sensor=false
Quitting from lines 90-91 (TourDetrackeR.Rmd)
Error: processing vignette 'TourDetrackeR.Rmd' failed with diagnostics:
GeomRasterAnn was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
trapezoid (2.0-0)
Maintainer: Jeremy Thoms Hetzel jthetzel@gmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
rtrapezoid: no visible global function definition for ‘runif’
Undefined global functions or variables:
runif
Consider adding
importFrom("stats", "runif")
to your NAMESPACE file.
TreatmentSelection (1.2.0)
Maintainer: Marshall Brown mdbrown@fhcrc.org
0 errors | 0 warnings | 0 notes
treeclim (2.0.0)
Maintainer: Christian Zang christian.zang@wzw.tum.de
0 errors | 0 warnings | 0 notes
treecm (1.2.2)
Maintainer: Marco Bascietto marco.bascietto@entecra.it
0 errors | 0 warnings | 0 notes
treemap (2.4-1)
Maintainer: Martijn Tennekes mtennekes@gmail.com
0 errors | 0 warnings | 0 notes
treescape (1.10.17)
Maintainer: Michelle Kendall m.kendall@imperial.ac.uk
0 errors | 0 warnings | 0 notes
trelliscope (0.9.7)
Maintainer: Ryan Hafen rhafen@gmail.com Bug reports: https://github.com/delta-rho/trelliscope/issues
0 errors | 0 warnings | 1 note
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
TriMatch (0.9.7)
Maintainer: Jason Bryer jason@bryer.org Bug reports: https://github.com/jbryer/TriMatch/issues
0 errors | 0 warnings | 0 notes
TripleR (1.5.3)
Maintainer: Felix Schönbrodt felix.schoenbrodt@psy.lmu.de
0 errors | 0 warnings | 0 notes
TSMining (1.0)
Maintainer: Cheng Fan raja8885@hotmail.com
0 errors | 0 warnings | 1 note
checking R code for possible problems ... NOTE
Func.SAX: no visible global function definition for ‘sd’
Func.SAX: no visible global function definition for ‘qnorm’
Func.matrix: no visible global function definition for ‘qnorm’
Func.motif: no visible global function definition for ‘sd’
Func.motif: no visible global function definition for ‘na.omit’
Func.motif: no visible global function definition for ‘combn’
Func.motif.multivariate: no visible global function definition for
‘txtProgressBar’
Func.motif.multivariate: no visible global function definition for
‘setTxtProgressBar’
Undefined global functions or variables:
combn na.omit qnorm sd setTxtProgressBar txtProgressBar
Consider adding
importFrom("stats", "na.omit", "qnorm", "sd")
importFrom("utils", "combn", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
tspmeta (1.2)
Maintainer: Bernd Bischl bernd_bischl@gmx.net Bug reports: https://github.com/berndbischl/tspmeta/issues
0 errors | 0 warnings | 0 notes
TSS.RESTREND (0.1.02)
Maintainer: Arden Burrell arden.burrell@unsw.edu.au
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘gimms’
tufterhandout (1.2.1)
Maintainer: Michael C Sachs sachsmc@gmail.com Bug reports: http://github.com/sachsmc/tufterhandout/issues
0 errors | 0 warnings | 1 note
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
tvm (0.3.0)
Maintainer: Juan Manuel Truppia jmtruppia@gmail.com
0 errors | 0 warnings | 0 notes
tweet2r (1.0)
Maintainer: Pau Aragó parago@uji.es
0 errors | 0 warnings | 0 notes
ubeR (0.1.3)
Maintainer: Andrew Collier andrew@exegetic.biz Bug reports: https://github.com/DataWookie/ubeR/issues
0 errors | 0 warnings | 0 notes
UBL (0.0.5)
Maintainer: Paula Branco paobranco@gmail.com Bug reports: https://github.com/paobranco/UBL/issues
1 error | 0 warnings | 0 notes
checking whether package ‘UBL’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/UBL.Rcheck/00install.out’ for details.
ukgasapi (0.13)
Maintainer: Timothy Wong timothy.wong@hotmail.co.uk Bug reports: https://github.com/timothy-wong/ukgasapi/issues
0 errors | 0 warnings | 1 note
checking Rd line widths ... NOTE
Rd file 'dataItemExplorer.Rd':
\usage lines wider than 90 characters:
apiurl = "http://marketinformation.natgrid.co.uk/MIPIws-public/public/publicwebservice.asmx")
These lines will be truncated in the PDF manual.
unvotes (0.1.0)
Maintainer: David Robinson admiral.david@gmail.com Bug reports: http://github.com/dgrtwo/unvotes/issues
0 errors | 0 warnings | 0 notes
UpSetR (1.3.0)
Maintainer: Jake Conway jake_conway@student.uml.edu Bug reports: http://github.com/hms-dbmi/UpSetR/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Warning in readLines(input, encoding = "UTF-8") :
incomplete final line found on '_output.yaml'
Quitting from lines 77-78 (set.metadata.plots.Rmd)
Error: processing vignette 'set.metadata.plots.Rmd' failed with diagnostics:
formal argument "axis.title.x" matched by multiple actual arguments
Execution halted
checking R code for possible problems ... NOTE
metadataHeat: possible error in theme(panel.background =
element_rect("white"), plot.title = element_text(margin = margin(b =
titleAdjustment), hjust = 0, size = 9.25, angle = 90), plot.margin =
unit(c(0, 0, 0, 0), "lines"), axis.title.x = element_text(size =
8.3), legend.position = "none", axis.line = element_blank(),
axis.line = element_line(colour = "gray0"), axis.line.y =
element_blank(), axis.line.x = element_line(colour = "gray0", size =
0.3), axis.text.y = element_blank(), axis.ticks.y = element_blank(),
axis.title.y = element_blank(), : formal argument "axis.title.x"
... 7 lines ...
titleAdjustment), hjust = 0, size = 8.3, angle = 90), plot.margin =
unit(c(0, 0, 0, 0), "lines"), axis.title.x = element_text(size = 7),
legend.position = "none", axis.line = element_blank(), axis.line =
element_line(colour = "gray0"), axis.line.y = element_blank(),
axis.line.x = element_line(colour = "gray0", size = 0.3), axis.text.y
= element_blank(), axis.ticks.y = element_blank(), axis.title.y =
element_blank(), : formal argument "axis.title.x" matched by multiple
actual arguments
metadataText: possible error in axis.text.x = element_blank(),
axis.ticks.x = element_blank(), axis.title.x = element_blank()):
formal argument "axis.title.x" matched by multiple actual arguments
useful (1.2.1)
Maintainer: Jared P. Lander packages@jaredlander.com
0 errors | 0 warnings | 0 notes
userfriendlyscience (0.4-1)
Maintainer: Gjalt-Jorn Peters gjalt-jorn@userfriendlyscience.com
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘userfriendlyscience-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: asymmetricalScatterMatrix
> ### Title: asymmetricalScatterMatrix
> ### Aliases: asymmetricalScatterMatrix
> ### Keywords: misc
>
> ### ** Examples
>
> asymmetricalScatterMatrix(infert, cols=c("parity", "age"),
+ rows=c("induced", "case", "spontaneous"),
+ showCorrelations="top-right");
Error in theme(axis.text = element_text(colour = "#000000", size = rel(0.8)), :
formal argument "strip.background" matched by multiple actual arguments
Calls: asymmetricalScatterMatrix ... dlvTheme -> %+replace% -> is.theme -> inherits -> theme
Execution halted
checking dependencies in R code ... NOTE
JavaVM: requested Java version ((null)) not available. Using Java at "" instead.
JavaVM: Failed to load JVM: /bundle/Libraries/libserver.dylib
JavaVM FATAL: Failed to load the jvm library.
checking R code for possible problems ... NOTE
didacticPlotTheme: possible error in theme(axis.text =
element_text(colour = "#000000", size = rel(0.8)), axis.ticks =
element_line(colour = "black"), legend.text = element_text(size =
rel(0.6)), legend.key = element_rect(colour = "grey80"),
legend.position = "top", legend.direction = "horizontal",
legend.key.size = unit(6, "mm"), panel.background = element_rect(fill
= "white", colour = NA), panel.border = element_rect(fill = NA,
colour = "grey50"), panel.grid.major = element_line(colour =
"grey90", size = 0.2), panel.grid.minor = element_line(colour =
... 13 lines ...
legend.key.size = unit(6, "mm"), panel.background = element_rect(fill
= "white", colour = NA), panel.border = element_rect(fill = NA,
colour = "grey50"), panel.grid.major = element_line(colour =
"grey90", size = 0.2), : formal argument "strip.background" matched
by multiple actual arguments
dlvTheme: possible error in panel.grid.minor = element_line(colour =
"grey98", size = 0.5), strip.background = element_rect(fill =
"grey80", colour = "grey50"), strip.background = element_rect(fill =
"grey80", colour = "grey50"), panel.margin = unit(c(0.5), "cm"),
...): formal argument "strip.background" matched by multiple actual
arguments
UsingR (2.0-5)
Maintainer: John Verzani verzani@math.csi.cuny.edu
1 error | 0 warnings | 0 notes
checking whether package ‘UsingR’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/UsingR.Rcheck/00install.out’ for details.
varian (0.2.2)
Maintainer: Joshua F. Wiley josh@elkhartgroup.com Bug reports: https://github.com/ElkhartGroup/varian/issues
0 errors | 0 warnings | 0 notes
vcdExtra (0.7-0)
Maintainer: Michael Friendly friendly@yorku.ca
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘alr3’
vcfR (1.2.0)
Maintainer: Brian J. Knaus briank.lists@gmail.com
0 errors | 0 warnings | 0 notes
VDAP (2.0.0)
Maintainer: Cody Moore Jumper9400@gmail.com
0 errors | 0 warnings | 0 notes
vdg (1.2.0)
Maintainer: Pieter Schoonees schoonees@gmail.com
0 errors | 0 warnings | 0 notes
vdmR (0.2.2)
Maintainer: Tomokazu Fujino fujino@fwu.ac.jp
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘vdmR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: vhist
> ### Title: Generate histogram with interactive functions
> ### Aliases: vhist
>
> ### ** Examples
>
> data(vsfuk2012)
> vhist(FertilityRate, vsfuk2012, "hist1", "vsfuk2012", fill=Type)
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Error in grid.Call.graphics(L_downviewport, name$name, strict) :
Viewport 'panel.3-4-3-4' was not found
Calls: vhist ... downViewport -> downViewport.vpPath -> grid.Call.graphics
Execution halted
checking tests ... ERROR
Running the tests in ‘tests/run-all.R’ failed.
Last 13 lines of output:
Viewport 'panel.3-4-3-4' was not found
1: vhist(Sepal.Length, iris, "hist01", "iris", fill = Species) at /Users/hadley/Documents/ggplot/ggplot2/revdep/checks/vdmR.Rcheck/vdmR/tests/test-vdmR.R:7
2: grid::downViewport("panel.3-4-3-4")
3: downViewport.default("panel.3-4-3-4")
4: downViewport(vpPath(name), strict, recording = recording)
5: downViewport.vpPath(vpPath(name), strict, recording = recording)
6: grid.Call.graphics(L_downviewport, name$name, strict)
DONE ===========================================================================
Error: Test failures
In addition: Warning message:
Placing tests in `inst/tests/` is deprecated. Please use `tests/testthat/` instead
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Quitting from lines 40-42 (vdmR-vignette.Rnw)
Error: processing vignette 'vdmR-vignette.Rnw' failed with diagnostics:
Viewport 'panel.3-4-3-4' was not found
Execution halted
VetResearchLMM (0.1.0)
Maintainer: Muhammad Yaseen myaseen208@gmail.com
0 errors | 0 warnings | 0 notes
vipor (0.4.4)
Maintainer: Scott Sherrill-Mix shescott@upenn.edu
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Loading required package: sm
Package 'sm', version 2.2-5.4: type help(sm) for summary information
Loading required package: ggplot2
Error: processing vignette 'usageExamples.Rnw' failed with diagnostics:
PositionQuasirandom was built with an incompatible version of ggproto.
Please reinstall the package that provides this extension.
Execution halted
viridis (0.3.4)
Maintainer: Simon Garnier garnier@njit.edu Bug reports: https://github.com/sjmgarnier/viridis/issues
0 errors | 0 warnings | 0 notes
viridisLite (0.1.3)
Maintainer: Simon Garnier garnier@njit.edu Bug reports: https://github.com/sjmgarnier/viridisLite/issues
0 errors | 0 warnings | 0 notes
visreg (2.3-0)
Maintainer: Patrick Breheny patrick-breheny@uiowa.edu
0 errors | 0 warnings | 0 notes
vmsbase (2.1.3)
Maintainer: Lorenzo D'Andrea support@vmsbase.org
1 error | 0 warnings | 0 notes
checking whether package ‘vmsbase’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/vmsbase.Rcheck/00install.out’ for details.
voxel (1.2.1)
Maintainer: Angel Garcia de la Garza agarciadlg@gmail.com
0 errors | 0 warnings | 0 notes
vrcp (0.1.1)
Maintainer: Yulei Wang yxw390@case.edu
0 errors | 0 warnings | 0 notes
VRPM (1.1)
Maintainer: Vanya Van Belle vanya.vanbelle@esat.kuleuven.be
0 errors | 0 warnings | 0 notes
VSE (0.99)
Maintainer: Hansen He hansenhe@uhnresearch.ca
0 errors | 0 warnings | 0 notes
vtreat (0.5.28)
Maintainer: John Mount jmount@win-vector.com Bug reports: https://github.com/WinVector/vtreat/issues
0 errors | 0 warnings | 0 notes
VWPre (0.9.0)
Maintainer: Vincent Porretta vincentporretta@gmail.com
0 errors | 0 warnings | 0 notes
waffle (0.6.0)
Maintainer: Bob Rudis bob@rud.is Bug reports: https://github.com/hrbrmstr/waffle/issues
0 errors | 0 warnings | 0 notes
wakefield (0.3.0)
Maintainer: Tyler Rinker tyler.rinker@gmail.com Bug reports: https://github.com/trinker/wakefield/issues
0 errors | 0 warnings | 0 notes
walkr (0.3.3)
Maintainer: Andy Yao andy.yao17@gmail.com Bug reports: https://github.com/andyyao95/walkr/issues
0 errors | 0 warnings | 0 notes
warbleR (1.1.2)
Maintainer: Marcelo Araya-Salas araya-salas@cornell.edu
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘monitoR’
waterfalls (0.1.0)
Maintainer: Hugh Parsonage hugh.parsonage+waterfall@gmail.com
0 errors | 0 warnings | 0 notes
Wats (0.10.3)
Maintainer: Will Beasley wibeasley@hotmail.com Bug reports: https://github.com/OuhscBbmc/Wats/issues
0 errors | 0 warnings | 0 notes
wbstats (0.1)
Maintainer: Jesse Piburn piburnjo@ornl.gov
0 errors | 0 warnings | 0 notes
wesanderson (0.3.2)
Maintainer: Karthik Ram karthik.ram@gmail.com Bug reports: https://github.com/karthik/wesanderson/issues
0 errors | 0 warnings | 2 notes
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
checking R code for possible problems ... NOTE
print.palette: no visible global function definition for ‘par’
print.palette: no visible global function definition for ‘image’
print.palette: no visible global function definition for ‘rect’
print.palette: no visible global function definition for ‘rgb’
print.palette: no visible global function definition for ‘text’
wes_palette: no visible global function definition for
‘colorRampPalette’
Undefined global functions or variables:
colorRampPalette image par rect rgb text
Consider adding
importFrom("grDevices", "colorRampPalette", "rgb")
importFrom("graphics", "image", "par", "rect", "text")
to your NAMESPACE file.
WHO (0.2)
Maintainer: Eric Persson expersso5@gmail.com Bug reports: https://www.github.com/expersso/WHO/issues
0 errors | 0 warnings | 0 notes
wikipediatrend (1.1.10)
Maintainer: Peter Meissner retep.meissner@gmail.com Bug reports: https://github.com/petermeissner/wikipediatrend/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Packages suggested but not available for checking:
‘AnomalyDetection’ ‘BreakoutDetection’
wordbankr (0.2.0)
Maintainer: Mika Braginsky mika.br@gmail.com Bug reports: http://github.com/langcog/wordbankr/issues
0 errors | 0 warnings | 0 notes
wppExplorer (2.0-0)
Maintainer: Hana Sevcikova hanas@uw.edu
0 errors | 0 warnings | 0 notes
wrswoR.benchmark (0.1-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org Bug reports: https://github.com/krlmlr/wrswoR.benchmark/issues
0 errors | 0 warnings | 0 notes
wrswoR (1.0-1)
Maintainer: Kirill Müller krlmlr+r@mailbox.org Bug reports: https://github.com/krlmlr/wrswoR/issues
0 errors | 0 warnings | 0 notes
x.ent (1.1.2)
Maintainer: Tien T. Phan phantien84@gmail.com Bug reports: https://github.com/tienpt/x.ent/issues
1 error | 0 warnings | 0 notes
checking whether package ‘x.ent’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/x.ent.Rcheck/00install.out’ for details.
xgboost (0.4-4)
Maintainer: Tong He hetong007@gmail.com Bug reports: https://github.com/dmlc/xgboost/issues
0 errors | 0 warnings | 0 notes
XGR (1.0.4)
Maintainer: Hai Fang hfang@well.ox.ac.uk
1 error | 0 warnings | 0 notes
checking whether package ‘XGR’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/XGR.Rcheck/00install.out’ for details.
xkcd (0.0.5)
Maintainer: Emilio Torres-Manzanera torres@uniovi.es
0 errors | 0 warnings | 0 notes
XLConnect (0.2-12)
Maintainer: Martin Studer martin.studer@mirai-solutions.com Bug reports: https://github.com/miraisolutions/xlconnect/issues
1 error | 0 warnings | 0 notes
checking whether package ‘XLConnect’ can be installed ... ERROR
Installation failed.
See ‘/Users/hadley/Documents/ggplot/ggplot2/revdep/checks/XLConnect.Rcheck/00install.out’ for details.
xtractomatic (3.1.1)
Maintainer: Roy Mendelssohn roy.mendelssohn@noaa.gov Bug reports: http://www.github.com/rmendels/xtractomatic/issues
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
date lon lat lowLon higLon lowLat higLat
4/23/2003 203.899 19.664 203.899 203.899 19.664 19.664
4/24/2003 204.151 19.821 203.912597 204.389403 18.78051934 20.86148066
4/30/2003 203.919 20.351 203.6793669 204.1586331 18.79728188 21.90471812
5/1/2003 204.229 20.305 203.9943343 204.4636657 18.90440013 21.70559987
Warning: Removed 308 rows containing missing values (geom_path).
Warning: Removed 308 rows containing missing values (geom_path).
Quitting from lines 528-535 (Usingxtractomatic.Rmd)
Error: processing vignette 'Usingxtractomatic.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
xxIRT (1.1.0)
Maintainer: Xiao Luo xluo1986@gmail.com Bug reports: http://github.com/xluo11/xxIRT
0 errors | 0 warnings | 0 notes
yorkr (0.0.5)
Maintainer: Tinniam V Ganesh tvganesh.85@gmail.com
0 errors | 0 warnings | 0 notes
zebu (0.1.0)
Maintainer: Olivier M. F. Martin olivmrtn@gmail.com Bug reports: https://github.com/olivmrtn/zebu/issues
0 errors | 0 warnings | 0 notes
zoo (1.7-13)
Maintainer: Achim Zeileis Achim.Zeileis@R-project.org
0 errors | 0 warnings | 0 notes
zooaRch (1.2)
Maintainer: Erik Otarola-Castillo eotarolacastillo@fas.harvard.edu
0 errors | 0 warnings | 0 notes
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