View source: R/divCurveFossilRecordSim.R
divCurveFossilRecordSim | R Documentation |
An extremely simple plotting function, which plots the original taxonomic diversity
versus the sampled taxonomic diversity, for use with output from the function simFossilRecord
.
If sampling processes were not included in the model, then it plots simply the
single diversity curve.
divCurveFossilRecordSim(
fossilRecord,
merge.cryptic = TRUE,
plotLegend = TRUE,
legendPosition = "topleft",
curveColors = c("black", "red"),
curveLineTypes = c(1, 2)
)
fossilRecord |
A list object output by |
merge.cryptic |
If |
plotLegend |
A logical. Should a legend be plotted? Only applies if sampling processes were modeled. |
legendPosition |
Where should the legend be plotted? See help for |
curveColors |
A vector of length two indicating what colors the original and sampled diversity curves should be displayed in. Only applies if sampling processes were modeled. |
curveLineTypes |
A vector of length two indicating what colors the original and sampled diversity curves should be displayed in. Only applies if sampling processes were modeled. |
This function is essentially a wrapper for paleotree
function multiDiv
.
This function returns nothing: it just creates a plot.
David W. Bapst
simFossilRecord
set.seed(44)
record <- simFossilRecord(p = 0.1, q = 0.1, r = 0.1, nruns = 1,
nTotalTaxa = c(20,30) ,nExtant = 0, plot = FALSE)
# now let's plot it
divCurveFossilRecordSim(record)
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