alignment_region: Retrieve a genomic alignment from a given region
In dwinter/rensembl: Talk to the ensembl REST API in R
Description
Usage
Arguments
Value
Description
Retrieve a genomic alignment from a given region
Usage
1
2
3
4
alignment_region(region, species = "homo_sapiens", aligned = FALSE,
compact = TRUE, compara = "multi", display_species_set = NULL,
mask = "soft", method = "EPO", species_set = NULL,
species_set_group = "mammals", req_format = "json")
Arguments
region
given as chr:start-end
Value
tree and information about sequence of the region for each species
dwinter/rensembl documentation built on May 15, 2019, 6:22 p.m.
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Description Usage Arguments Value
Description
Retrieve a genomic alignment from a given region
Usage
1 2 3 4 | alignment_region(region, species = "homo_sapiens", aligned = FALSE,
compact = TRUE, compara = "multi", display_species_set = NULL,
mask = "soft", method = "EPO", species_set = NULL,
species_set_group = "mammals", req_format = "json")
|
Arguments
region |
given as chr:start-end |
Value
tree and information about sequence of the region for each species
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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