Wishbone: Execute Wishbone

In dynverse/Wishbone: Wrapper for Wishbone

Description

Execute Wishbone

Usage

Wishbone(counts, start_cell_id, knn = 10, n_diffusion_components = 2,
  n_pca_components = 15, markers = "~", branch = TRUE, k = 15,
  num_waypoints = 50, normalize = TRUE, epsilon = 1, verbose = FALSE,
  num_cores = 1)

Arguments

counts	Counts
start_cell_id	ID of start cell
knn	k nearest neighbours for diffusion
n_diffusion_components	number of diffusion components
n_pca_components	number of pca components
markers	markers to use
branch	whether or not to branch or linear
k	k param
num_waypoints	number of waypoints
normalize	whether or not to normalize
epsilon	epsilon param
verbose	whether or not to print the wishbone output
num_cores	number of cores to use

dynverse/Wishbone documentation built on May 7, 2019, 2:55 a.m.