NEWS.md

In dynverse/anndata: 'anndata' for R

anndata 0.8.0

• FUNCTIONALITY: Added support for read_zarr() and write_zarr() (PR #33).

• BUG FIX: Use the right interface for the all.equal() function (PR #32).

• BUG FIX: Add py_to_r converter for anndata.abc._AbstractCSDataset (PR #34).

• MINOR CHANGES: Ignore python warnings when running tests (PR #34).

anndata 0.7.5.5

• FUNCTIONALITY: Added initial support for loading AnnData with backed=TRUE.

anndata 0.7.5.4

• BUG FIX: Set dimnames on layer views as well (#16).

• BUG FIX: Fix Github Actions for R CMD Check, test-coverage and pkgdown.

• DOCUMENTATION: Fix pkgdown config structure by adding missing topics.

• DOCUMENTATION: Regenerate the Rd files using the current CRAN version of roxygen2.

anndata 0.7.5.3

• BUG FIX write_h5ad(ad): Fix function pointer (#8).

• BUG FIX: Add manual converter function for converting a csc_matrix to dgCMatrix (#11).

anndata 0.7.5.2

• MINOR CHANGE: Add getters and setter for the internal python objects.

• MINOR CHANGE: Alter how and when Python objects get converted to R and vice versa.

• DOCUMENTATION: Documentation site is available at https://anndata.dynverse.org!

• DOCUMENTATION: Added two basic vignettes.

anndata 0.7.5.1

• MINOR CHANGE: Add wrapper classes for Raw and Layers objects.

• MAJOR CHANGE: Calling ad[..., ...] now correctly returns a view of ad instead of returning a matrix.

• TESTING: Extend tests based on theislab/anndata repository.

anndata 0.7.5 (2020-11-19)

• MINOR CHANGES: Updated Python requirements to anndata 0.7.5.

• NEW FEATURE AnnData(): Added obsp, varp, and raw objects to parameters.

• TESTING: Added more tests based on theislab/anndata repository.

anndata 0.7.4 (2020-11-04)

• Initial release

dynverse/anndata documentation built on April 17, 2025, 5:30 a.m.