In dynverse/dyno: Set of packages for doing trajectory inference on single-cell data

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Inferring trajectories using dyno

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  out.width = "100%",
  fig.path = "man/figures/",
  message = FALSE,
  dpi = 300
)
set.seed(1)

The dyno package offers end-users a complete TI pipeline. It features:

• a uniform interface to r nrow(dynmethods::methods) TI methods,
• an interactive guideline tool to help the user select the most appropriate method,
• streamlined interpretation and visualisation of trajectories, including colouring by gene expression or clusters, and
• downstream analyses such as the identification of potential marker genes.

For information on how to use dyno, check out the installation instructions, tutorials and documentation at dynverse.org

Latest changes

Check out news(package = "dyno") or NEWS.md for a full list of changes.

cat(dynutils::recent_news())

Dynverse dependencies

dynverse/dyno documentation built on Feb. 7, 2020, 4:57 a.m.