setProteinLength: Update protein lengths
In eahrne/apmsTools: Tools for analysis of Affinity Purification Mass Spectrometry data
Description
Usage
Arguments
Details
Value
Note
Author(s)
References
See Also
Description
Updates protein lengths (extracted from .fasta) in apmsExp object,
Usage
1
setProteinLength(apmsExp, fastaFile)
Arguments
apmsExp
An object of class apmsExp.
fastaFile
Full path to .fasta file
Details
Not yet available
Value
An updated apmsExp object
specCountDf
data.frame, df
df[,1:3]: "protein description","gene name","protein length"
df[,4:n] bait-prey spec counts
Note
Not yet available
Author(s)
Erik Ahrne
erik.ahrne@unibas.ch
References
Not yet available
See Also
Not yet available
eahrne/apmsTools documentation built on May 15, 2019, 7:25 p.m.
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Description Usage Arguments Details Value Note Author(s) References See Also
Description
Updates protein lengths (extracted from .fasta) in apmsExp object,
Usage
1 | setProteinLength(apmsExp, fastaFile)
|
Arguments
apmsExp |
An object of class apmsExp. |
fastaFile |
Full path to .fasta file |
Details
Not yet available
Value
An updated apmsExp object
specCountDf |
data.frame, df df[,1:3]: "protein description","gene name","protein length" df[,4:n] bait-prey spec counts |
Note
Not yet available
Author(s)
Erik Ahrne
erik.ahrne@unibas.ch
References
Not yet available
See Also
Not yet available
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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