test/get_h5seurat_data.R

suppressPackageStartupMessages(require(Seurat))
suppressPackageStartupMessages(require(SeuratData))
suppressPackageStartupMessages(require(SeuratDisk))

InstallData("pbmc3k")
data("pbmc3k.final")

args = commandArgs(trailingOnly=TRUE)

SaveH5Seurat(pbmc3k.final, filename = args[1])
ebi-gene-expression-group/workflowscriptscommon documentation built on Feb. 20, 2022, 6:30 p.m.