gLRTH: The Function for the Likelihood Ratio Test for Genome-Wide...
In echohan/gLRTH: An R package for the Likelihood Ratio Test for Genome-Wide Association under Genetic Heterogeneity

The Function for the Likelihood Ratio Test for Genome-Wide Association under Genetic Heterogeneity with genotype frequencies as input values

1	gLRTH(n0, n1, n2, m0, m1, m2)

`n0`	AA genotype frequency in case
`n1`	Aa genotype frequency in case
`n2`	aa genotype frequency in case
`m0`	AA genotype frequency in control
`m1`	Aa genotype frequency in control
`m2`	aa genotype frequency in control

The test statistic and asymptotic p-value for the likelihood ratio test under genetic heterogeneity

Xiaoxia Han and Yongzhao Shao

Qian M., Shao Y. (2013) A Likelihood Ratio Test for Genome-Wide Association under Genetic Heterogeneity. Annals of Human Genetics, 77(2): 174-182.

1	gLRTH(n0=2940, n1=738, n2=53, m0=3601, m1=1173, m2=117)

echohan/gLRTH documentation built on May 15, 2019, 7:51 p.m.

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