Files in ecohealthalliance/sos
.gitignore
DESCRIPTION
NAMESPACE
R/column_cleaning_workflows.R
R/get_current_sos.R
R/ggsurv.R
R/import_country_codes.R
R/match_country.R
R/string_processing_utilities.R
README.md
data/country_codes.RData
data/country_data.RData
data/country_datasets.RData
data/country_names.RData
data/sos_cleaned.RData
data/sos_countries.RData
data/sos_raw.RData
inst/out/Lifespan of Biosurveillance Systems by current status 5yr.png
inst/out/Lifespan of Biosurveillance Systems by current status density.png
inst/out/Lifespan of Biosurveillance Systems by current status.png
inst/out/Lifespan of Biosurveillance Systems.png
inst/out/Number of Surveillance Systems Created and Terminated (with over-under line).pdf
inst/out/Number of Surveillance Systems Created and Terminated (with over-under line).png
inst/out/Number of Surveillance Systems Created and Terminated.pdf
inst/out/Number of Surveillance Systems Created and Terminated.png
inst/out/active_systems_by_entity_type_area.png
inst/out/active_systems_by_entity_type_area_not_stacked.png
inst/out/active_systems_by_entity_type_area_not_stacked_log.png
inst/out/active_systems_by_entity_type_area_stacked.png
inst/out/active_systems_by_entity_type_line.png
inst/out/active_systems_by_entity_type_line_log.png
inst/out/active_systems_log.png
inst/out/countries_matches.csv
inst/out/demo_log_map_2015-08-19.pdf
inst/out/demo_log_map_2015-08-19.png
inst/out/demo_map_2015-08-19.pdf
inst/out/demo_map_2015-08-19.png
inst/out/entity_type.txt
inst/out/entity_type_histogram.png
inst/out/entity_type_table.txt
inst/out/sos_cleaned.csv
inst/out/sos_countries.csv
inst/rawdata/FAOCountryCodes.csv
inst/rawdata/country-datasets/Age-standardized DALY rates.csv
inst/rawdata/country-datasets/Age-standardized death rate by three major cause groups, both sexes.csv
inst/rawdata/country-datasets/Disease Presence.csv
inst/rawdata/country-datasets/Health expenditure per capita, all countries, selected years.csv
inst/rawdata/country-datasets/Health expenditure ratios, all countries, selected years.csv
inst/rawdata/country-datasets/Per capita GDP at current prices - US dollars.csv
inst/rawdata/countrynames.txt
inst/rawdata/sos_latest.csv
inst/scratch/2-time-series-plots.R
inst/scratch/2015-08-24 sympsoms and disease scratch.R
inst/scratch/country_map_scratch.R
inst/scratch/country_matching_scratch.R
inst/scratch/export_test_country_matches.R
inst/scratch/fuzzy_match_scratch.R
inst/scratch/lifespan plot scratch.R
inst/scratch/old-load-and-clean.R
inst/scratch/plots of animals : humans : plants.R
inst/scratch/purrr_scratch.R
inst/scratch/syndromic time-series scratch.R
inst/scripts/1-load-and-clean.R
inst/scripts/Results.Rmd
inst/scripts/Results.docx
inst/scripts/Results.html
inst/scripts/Results.md
inst/scripts/Results.pdf
inst/scripts/Results.r
inst/scripts/Surveillance System Maps.Rmd
inst/scripts/Surveillance_System_Maps.html
inst/scripts/Surveillance_System_Maps.pdf
inst/scripts/Time Series Plots.Rmd
inst/scripts/Time Series Plots.r
inst/scripts/Time_Series_Plots.html
inst/scripts/bs2/analysis - syndromic vs single disease.R
inst/scripts/bs2/analysis - syndromic vs single disease.html
inst/scripts/bs2/country_analysis/1_transform_datasets.R
inst/scripts/bs2/country_analysis/2_merge_datasets.R
inst/scripts/bs2/country_analysis/3_analysis.Rmd
inst/scripts/bs2/country_analysis/3_analysis.html
inst/scripts/bs2/survival_analysis_scratch.R
inst/scripts/bs2/survival_analysis_scratch.html
inst/scripts/ingest_new_country_codes.R
inst/scripts/time-series-plots.R
inst/sos_versions/sos_2015-08-03-182023.csv
inst/sos_versions/sos_2015-08-03-182539.csv
inst/sos_versions/sos_2015-08-04-140154.csv
inst/sos_versions/sos_2015-08-04-143607.csv
inst/sos_versions/sos_2015-08-04-150122.csv
inst/sos_versions/sos_2015-08-04-152017.csv
inst/sos_versions/sos_2015-08-05-141331.csv
inst/sos_versions/sos_2015-08-05-145432.csv
inst/sos_versions/sos_2015-08-05-152238.csv
inst/sos_versions/sos_2015-08-05-160018.csv
inst/sos_versions/sos_2015-08-10-102735.csv
inst/sos_versions/sos_2015-08-10-103333.csv
inst/sos_versions/sos_2015-08-10-110147.csv
inst/sos_versions/sos_2015-08-10-111150.csv
inst/sos_versions/sos_2015-08-10-173524.csv
inst/sos_versions/sos_2015-08-11-111814.csv
inst/sos_versions/sos_2015-08-17-104656.csv
inst/sos_versions/sos_2015-08-17-142623.csv
inst/sos_versions/sos_2015-08-18-105348.csv
inst/sos_versions/sos_2015-08-18-111633.csv
inst/sos_versions/sos_2015-08-18-115441.csv
inst/sos_versions/sos_2015-08-18-154809.csv
inst/sos_versions/sos_2015-08-19-112829.csv
inst/sos_versions/sos_2015-08-19-123604.csv
inst/sos_versions/sos_2015-08-20-160634.csv
inst/sos_versions/sos_2015-08-21-172725.csv
inst/sos_versions/sos_2015-08-21-173531.csv
inst/sos_versions/sos_2015-08-24-154040.csv
inst/sos_versions/sos_2015-08-24-165437.csv
inst/sos_versions/sos_2015-08-31-181204.csv
inst/sos_versions/sos_2015-09-01-181725.csv
inst/sos_versions/sos_2015-09-02-094948.csv
inst/sos_versions/sos_2015-09-03-001740.csv
inst/sos_versions/sos_2015-09-08-145126.csv
inst/sos_versions/sos_2015-09-08-150745.csv
inst/sos_versions/sos_2015-09-08-152024.csv
inst/sos_versions/sos_2015-09-09-133011.csv
inst/sos_versions/sos_2015-09-10-143928.csv
inst/sos_versions/sos_2015-09-10-150558.csv
inst/sos_versions/sos_2015-09-10-151531.csv
inst/sos_versions/sos_2015-09-11-142627.csv
inst/sos_versions/sos_2015-09-11-143946.csv
inst/sos_versions/sos_2015-09-17-152746.csv
inst/sos_versions/sos_2015-09-17-161018.csv
inst/sos_versions/sos_2015-09-17-172153.csv
inst/sos_versions/sos_2015-09-19-123014.csv
inst/sos_versions/sos_2015-09-22-154143.csv
inst/sos_versions/sos_2015-10-14-153938.csv
inst/sos_versions/sos_2015-10-22-123059.csv
inst/sos_versions/sos_2015-10-22-163807.csv
inst/sos_versions/sos_2015-12-04-155742.csv
inst/sos_versions/sos_2015-12-04-163353.csv
inst/sos_versions/sos_2015-12-07-111036.csv
inst/sos_versions/sos_2016-01-08-160307.csv
inst/sos_versions/sos_2016-01-11-145122.csv
license.txt
sos.Rproj
