GenomicHilbertCurve-class: The GenomicHilbertCurve class

In eilslabs/HilbertCurve: Making 2D Hilbert Curve

Description

The GenomicHilbertCurve class

Details

The GenomicHilbertCurve-class is inherited from the HilbertCurve-class. Basically the structure of this class is almost the same as the HilbertCurve-class but with several additional slots added to facilitate visualizing genomic data.

Methods

The GenomicHilbertCurve-class provides following methods:

• GenomicHilbertCurve: constructor method;

• hc_points,GenomicHilbertCurve-method: add points;

• hc_segments,GenomicHilbertCurve-method: add lines;

• hc_rect,GenomicHilbertCurve-method: add rectangles;

• hc_polygon,GenomicHilbertCurve-method: add poygons;

• hc_text,GenomicHilbertCurve-method: add text;

• hc_layer,GenomicHilbertCurve-method: add layers undel "pixel" mode;

• hc_map,GenomicHilbertCurve-method: show the map of different categories on the curve. Works both for "normal" and "pixel" mode

The usage of above functions are almost same as those functions for the HilbertCurve-class except that the second argument which specifies the intervals should be a GRanges object.

Author(s)

Zuguang Gu <[e-mail]>

Examples

NULL

eilslabs/HilbertCurve documentation built on May 16, 2019, 1:23 a.m.