GreatJob-class: Class to store and retrieve GREAT results

In eilslabs/rGREAT: Client for GREAT Analysis

Description

Class to store and retrieve GREAT results

Details

After submitting request to GREAT server, the generated results will be available on GREAT server for some time. The GreatJob-class is defined to store parameters that user has set and result tables what were retrieved from GREAT server.

Constructor

Users don't need to construct by hand, submitGreatJob is used to generate a GreatJob-class instance.

Workflow

After submitting request to GREAT server, users can perform following steps:

• call getEnrichmentTables to get enrichment tables for selected ontologies catalogues.

• call plotRegionGeneAssociationGraphs to get associations between regions and genes as well as making plots.

Author(s)

Zuguang gu <[e-mail]>

Examples

# please refer to page of `submitGreatJob`
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eilslabs/rGREAT documentation built on May 16, 2019, 1:25 a.m.