Man pages for einarhjorleifsson/mac
Miscalaneous set of functions related fish stock assessment work
| compile_admb2 | Compile admb code |
| eqsim_ggplot2 | Plots of the results from eqsim |
| eqsim_plot2 | Plots of the results from eqsim |
| eqsim_run2 | simulates the equilibrium results for a population |
| FIT_all | Some title |
| FIT_base | Some title |
| FIT_segreg | Some title |
| get_sam_run | get_sam_run |
| hcr_implementation_model_1 | Add implementation error to TAC |
| hcr_management_bio | Biomass-based Harvest Control Rule |
| hcr_management_bio2 | iCod Biomass-based Harvest Control Rule |
| hcr_management_bio_pred | B-based Harvest Control Rule |
| hcr_management_effort | Effort type management |
| hcr_management_fmort | F-based Harvest Control Rule |
| hcr_management_fmort_pred | F-based Harvest Control Rule |
| hcr_observation_error | Observation error model |
| hcr_operating_model | Operating model |
| hcr_read_ctr | HCR - Read control file |
| hcr_read_startfile | HCR: Reading starting years input from file |
| hcr_recruitment_model | hcr_recruitment_model |
| hcr_set_assErrors | HCR: Setup of assessment errors |
| hcr_set_dimensions | hcr_set_dimensions |
| hcr_set_recErrors | HCR: Setup of recruitment error structure |
| hcr_set_starting_conditions | HCR: Set starting condition for stock |
| hcr_set_wgtErrors | hcr_set_wgtErrors |
| hcr_summarise_data | hcr_summarise_data |
| hcr_TAC_to_Fmult | hcr_TAC_to_Fmult |
| Mac | Some title |
| Mac.ctrl | Some title |
| mac_get_starting_condition | mac_get_starting_condition |
| mac-package | Title mac package |
| mac_run_the_stuff | mac_run_the_stuff |
| mac_run_the_stuff2 | mac_run_the_stuff2 |
| Mac.sam | Some title |
| mac_srest_cat | Write srest.dat to disk |
| Mac.tun | Some title |
| rby | Some title |
| rbya | Some title |
| read.conf | read.conf |
| read.fit | read.fit |
| read.ibya | read.ibya |
| read.lowestoft | read.lowestoft |
| read.rby | Reads the stock summary values |
| read.rbya | Reads the stock in numbers and fishing mortality |
| sam_2013n | Some title |
| sam2flr | Read in sam output to FLSAM object |
| SIM_all | Some title |
| SIM_base | Some title |
| SIM_segreg | Some title |
| ypr | ypr |
