Description Usage Arguments Author(s)
An amended function from the msy-package
1 2 3 4 5 |
fit |
A list returned from the function fitModels |
bio.years |
The years to sample maturity, weights and M from |
bio.const |
A flag, if FALSE mean of the biological values from the years selected are used |
sel.years |
The years to sample the selection patterns from |
sel.const |
A flag, if FALSE mean of the selection patterns from the years selected are used |
Fscan |
F values to scan over |
Fcv |
Assessment error in the advisory year |
Fphi |
Autocorrelation in assessment error in the advisory year |
Blim |
This we know |
Bpa |
This we know |
recruitment.trim |
A numeric vector with two log-value clipping the extreme recruitment values from a continuous lognormal distribution. The values must be set as c("high","low"). |
Btrigger |
If other than 0 (default) the target F applied is reduced by SSB/Btrigger |
Nrun |
The number of years to run in total (last 50 years from that will be retained) |
process.error |
Use stochastic recruitment or mean recruitment? (TRUE = predictive) |
verbose |
Flag, if TRUE (default) indication of the progress of the simulation is provided in the console. Useful to turn to FALSE when knitting documents. |
extreme.trim |
Call John Simmonds :-) |
Colin Millar colin.millar@jrc.ec.europa.eu
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