README.md

In eisascience/scRNASeqEisa:

This repo has been moved to https://github.com/bimberlabinternal/OOSAP

scRNASeq

Tools and functions for researching/analyzing scRNASeq in my pipelines...

Most of these tools are for post-DGE (digital gene expression) matrix creation. E.g. post cellRanger for 10X data.

Will update function names and descriptions below soon...

directory structure and key files

./rbin

This directory contains the R files that house the various functions. They are split by utility.

./rbin/SustomFXs_Caret.R

./rbin/CustomFXs_Seurat.R

./rbin/CustomFXs_Useful.R

./data

This directory contains data files that the functions above utilize.

./data/CellCycle

./data/QuickGO

./data/Rhesus

eisascience/scRNASeqEisa documentation built on Aug. 7, 2019, 1:55 a.m.