Man pages for eliotmiller/ecoPDcorr
Ecologically-informed phylodiversity metrics
| abundance | Get or set species abundances |
| aed | Abundance-weighted evolutionary distinctiveness |
| caterpillar | Caterpillar plots |
| coerce | Extract phylo4com phylogenies |
| communities | List communities |
| ecoPD-package | Ecologically-informed phylodiversity metrics in R |
| Families | Plant family lookup vector |
| genera | Extract genus names |
| iac | Imbalance of Abundances at the Clade level |
| LookupTL | Family-based lookup table for minimum tip lengths |
| minTL | Get or set minimum tip lengths |
| pae | Phylogenetic-Abundance Evenness |
| pairdist | Calculate pairwise distances between nodes |
| pd_from_Cadotte | Calculate phylogenetic diversity |
| phylo4com | Create community phylogenies object |
| phylo4com-class | phylo4com class |
| richness | Calculate richness for each community |
| shannon | Shannon diversity index |
| simpson | Phylogenetic Simpson's diversity index |
| siteBySpecies | Generate site-by-species matrix |
| Supertree | Reference plant phylogeny |
| tipLength | Calculate distance to tips from ancestors |
| weeds | Weed phylogeny and community data |
