impute: Imputation Function

In elnazmirzaei/dogs:

Description

This function will Impute zero values of your data.

Usage

impute(A = 0, loged = FALSE, prepared = FALSE, method = "NMF")

Arguments

a	data matrix A, which represent gene expressions for each cell/sample. rows = genes and cols= cells, first column should be gene names, first row should be cell names.
b	loged should be TRUE if your data is loged, default is FALSE
c	prepared to save time prepared should be set to TRUE if you have ran impute on your data before, and you just want to try different methods, default is FALSE
d	method could be set to "NMF", "KNN" or "SlopeOne". default is "NMF"

Examples

impute(A)
impute(A, method="NMF" )

elnazmirzaei/dogs documentation built on Nov. 22, 2020, 9:06 a.m.