tscor: OTU correlation matrix for each subject

Description Usage Arguments Value

Description

OTU correlation matrix for each subject

Usage

1
tscor(ana, method = "kendall", subject_var, fill.na = 0)

Arguments

ana

a phyloseq object of counts/relative abundance data.

method

an option of the correlation method ("pearson","kendall","spearman"). The default method is "kendall".

subject_var

a numeric vector of subject.

fill.na

a number between 0 and 1 to fill the missing value. The default value is 0.

Value

a list of temporal correlation matrix for each subject.


elong0527/MINT documentation built on May 16, 2019, 3:56 a.m.