estimateEffect: Compute the estimated effect of the model covariates on...

In emauryg/STRAND_R: Structural TensoR ANalysis and Decomposition (STRAND)

Description

Compute the estimated effect of the model covariates on signature contribution

Usage

estimateEffect(mod0, X, niter, sig_number, to_plot = TRUE)

Arguments

mod0	: fitted model from STRAND
niter	: number of simulations to draw for the estimation of the effect (default = 1000)
X:	design matrix with the covariates you wish to estimate the effect of
sig_number:	number of the signature you want to estimate the effect of (i.e. 1, or 2, etc.)
to_plot:	boolean indicating whether you want to plot the effect (default = TRUE)

Value

a list containing the summary of the coefficients including p-values, simulated draws, and ggplot object.

emauryg/STRAND_R documentation built on Dec. 20, 2021, 4:22 a.m.