fix_typos: Fix typos programmatically fix typos using 'taxize' R...

Description Usage Arguments Details Value

View source: R/taxclean.R

Description

Fix typos programmatically fix typos using taxize R package. First, remove typos using rm_typos(), then check the Catalogue Of Life (COL) using taxize to find possible matches of erroneous species names.

Usage

1
fix_typos(sp, parallel = FALSE, n_cores = 6)

Arguments

sp

species name.

parallel

logical, weather to parallelize or not.

n_cores

number of cores to use in parallilization.

Details

Species not matched are returned as 'NA'; species without species-level taxonomy are returned as 'Species NA'

Value

a string with the species name taxonomy suggested by COL.


emilio-berti/taxclean documentation built on May 30, 2021, 5:19 p.m.