| classification | Gene classification |
| class_plot | Classification plot |
| eval_k | Evaluation of the parameter k |
| extract_module | Extraction and plotting of connected subnetworks from a graph... |
| framework_mND | mND global function |
| mND | mND score |
| mND_demo | mND demo data |
| mND_s | Integration with mND function |
| neighbour_index | Index neighbours |
| optimize_k | Optimization of k value |
| run_ND | Network diffusion |
| signif_assess | Significance assessment |
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