emvolz-phylodynamics/treedater-dev: Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation

Functions for estimating times of common ancestry and molecular clock rates of evolution using a variety of evolutionary models, parametric and nonparametric bootstrap confidence intervals, methods for detecting outlier lineages, root-to-tip regression, and a statistical test for selecting molecular clock models. The methods are described in Volz, E.M. and S.D.W. Frost (2017) <doi:10.1093/ve/vex025>.

Getting started

Package details

AuthorErik Volz [aut, cre]
MaintainerErik Volz <erik.volz@gmail.com>
LicenseGPL-2
Version0.5.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("emvolz-phylodynamics/treedater-dev")
emvolz-phylodynamics/treedater-dev documentation built on Jan. 28, 2020, 6:05 p.m.