treestructure.test: Test the hypothesis that two clades within a tree were...
In emvolz-phylodynamics/treestructure: Detect Population Structure Within Phylogenetic Trees
treestructure.test R Documentation
Test the hypothesis that two clades within a tree were generated by the same coalescent process.
Description
Test the hypothesis that two clades within a tree were generated by the same coalescent process.
Usage
treestructure.test(tre, x, y, nsim = 10000)
Arguments
tre
An ape::phylo tree, must be binary and rooted
x
A character vector of tip labels or numeric node numbers. If numeric, can include internal node numbers.
y
as x, but must be disjoint with x
nsim
Number of simulations (larger = slower and more accurate)
emvolz-phylodynamics/treestructure documentation built on March 1, 2025, 3:47 p.m.
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| treestructure.test | R Documentation |
Test the hypothesis that two clades within a tree were generated by the same coalescent process.
Description
Test the hypothesis that two clades within a tree were generated by the same coalescent process.
Usage
treestructure.test(tre, x, y, nsim = 10000)
Arguments
tre |
An ape::phylo tree, must be binary and rooted |
x |
A character vector of tip labels or numeric node numbers. If numeric, can include internal node numbers. |
y |
as x, but must be disjoint with x |
nsim |
Number of simulations (larger = slower and more accurate) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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