API for epiforecasts/EpiNow
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
| Global functions | |
|---|---|
| R_to_growth | Man page Source code |
| add_dates | Man page Source code |
| adjust_for_truncation | Man page Source code |
| adjust_infection_to_report | Man page Source code |
| clean_nowcasts | Man page Source code |
| country_map | Man page Source code |
| covid_generation_times | Man page |
| covid_generation_times_summary | Man page |
| covid_incubation_period | Man page |
| covid_serial_intervals | Man page |
| dist_fit | Man page Source code |
| dist_skel | Man page Source code |
| epi_measures_pipeline | Man page Source code |
| estimate_R0 | Man page Source code |
| estimate_doubling_time | Man page Source code |
| estimate_little_r | Man page Source code |
| estimate_r_in_window | Man page Source code |
| estimate_time_varying_r | Man page |
| gamma_dist_def | Man page Source code |
| generate_pseudo_linelist | Man page Source code |
| get_dist_def | Man page Source code |
| get_local_import_case_counts | Man page Source code |
| get_regions | Man page Source code |
| get_timeseries | Man page Source code |
| global_map | Man page Source code |
| growth_to_R | Man page Source code |
| linelist_from_case_counts | Man page Source code |
| load_nowcast_result | Man page Source code |
| lognorm_dist_def | Man page Source code |
| make_conf | Man page Source code |
| map_prob_change | Man page Source code |
| nowcast_pipeline | Man page Source code |
| plot_confidence | Man page Source code |
| plot_forecast | Man page Source code |
| plot_grid | Man page Source code |
| plot_pipeline | Man page Source code |
| plot_summary | Man page |
| pull_max_var | Man page Source code |
| rbinom_size | Man page Source code |
| regional_rt_pipeline | Man page Source code |
| regional_summary | Man page |
| report_cases | Man page |
| report_littler | Man page |
| report_nowcast | Man page Source code |
| report_reff | Man page |
| report_summary | Man page |
| rt_pipeline | Man page Source code |
| sample_approx_dist | Man page Source code |
| sample_delay | Man page |
| simulate_cases | Man page Source code |
| split_linelist_by_day | Man page |
| summarise_cast | Man page Source code |
| summarise_results | Man page |
| summarise_to_csv | Man page |
| theme_map | Man page Source code |
