Files in epiforecasts/covid19.slovakia.mass.testing
Code accompanying the manuscript "The effectiveness of population-wide screening in reducing SARS-CoV-2 infection prevalence in Slovakia"
.RData
.Rbuildignore
.Renviron
.gitignore
.here
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/bed_occupancy.r
R/county_table.r
R/datasets.r
R/estimate_min_specificity.r
R/make_labels.r
R/mobility.r
R/pcr_incidence.r
R/plot_predicted_prevalence.r
R/prevalence.r
R/regression.r
R/risk_ratios.r
R/self_adjusted_risk_ratios.r
R/simplify_names.r
R/sysdata.rda
README.Rmd
README.md
covid19.slovakia.mass.testing.Rproj
data-raw/data/COVID_pozitiv_Okr_20201112.xlsx
data-raw/data/Plosne testovanie.xlsx
data-raw/data/USJ_hranice_2.gpkg
data-raw/data/data_covid_okresy.xlsx
data-raw/data/generation_time.rds
data-raw/data/incubation_period.rds
data-raw/data/indicators/MS_2011-1.xlsx
data-raw/data/indicators/Roma Atlas 2019-1.xlsx
data-raw/data/indicators/slovakia_income_by_region.xlsx
data-raw/data/indicators/slovakia_mean_age_by_district.xlsx
data-raw/data/indicators/slovakia_pop_dens_by_district.xlsx
data-raw/data/reporting_delay.rds
data-raw/data/rt/cases_by_infection.csv
data-raw/data/rt/cases_by_report.csv
data-raw/data/rt/growth_rate.csv
data-raw/data/rt/latest_date.rds
data-raw/data/rt/prevalence-samples.csv
data-raw/data/rt/prevalence.csv
data-raw/data/rt/reported_cases.csv
data-raw/data/rt/rt.csv
data-raw/data/rt/summary_data.csv
data-raw/data/rt/summary_table.csv
data-raw/scripts/convert_data.r
data-raw/scripts/gr.r
data-raw/scripts/hospitalisations.r
data-raw/scripts/prevalence.r
data-raw/scripts/rt-distributions.r
data-raw/scripts/rt.r
data/PCR.inc.rdata
data/R.county.rdata
data/Rt.county.rdata
data/bed_occupancy.rdata
data/covariates.rdata
data/mob.slo.rdata
data/ms.tst.rdata
data/prevalence.samples.rdata
data/slovakia_shape.rdata
man/PCR.inc.Rd
man/Rt.county.Rd
man/bed_occupancy.Rd
man/county_table.Rd
man/covariates.Rd
man/estimate_min_specificity.Rd
man/make_labels.Rd
man/mob.slo.Rd
man/mobility.Rd
man/ms.tst.Rd
man/pcr_incidence.Rd
man/plot_predicted_prevalence.Rd
man/prevalence.Rd
man/prevalence.samples.Rd
man/regression.Rd
man/risk_ratios.Rd
man/self_adjusted_risk_ratios.Rd
man/simplify_names.Rd
man/slovakia_shape.Rd
