tests/testthat/_snaps/estimate_ascertainment.md

In epiverse-trace/datadelay: Estimate Disease Severity and Case Ascertainment

Basic expectations for static ascertainment

Code
  estimate_ascertainment(data = ebola1976, severity_baseline = 0.7)
Output
    ascertainment_estimate ascertainment_low ascertainment_high
  1               0.732906         0.7162026          0.7599719

Correct for delays for static ascertainment

Code
  estimate_ascertainment(data = ebola1976, delay_density = function(x) dgamma(x,
    shape = 2.4, scale = 3.33), severity_baseline = 0.7)
Output
    ascertainment_estimate ascertainment_low ascertainment_high
  1              0.7297748         0.7147963          0.7530931

Static ascertainment from vignette

Code
  estimate_ascertainment(data = covid_uk, delay_density = function(x) dlnorm(x,
    meanlog = 2.577, sdlog = 0.44), severity_baseline = 0.014)
Output
    ascertainment_estimate ascertainment_low ascertainment_high
  1             0.06779661        0.06734007         0.06829268

epiverse-trace/datadelay documentation built on March 6, 2025, 12:55 a.m.