Files in epongpipat/ppi
Psychophysiological Interaction (PPI)
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/.DS_Store
R/analyze.R
R/analyze_glm_fsl.R
R/build_afni_cmd.R
R/calculate_mean_func.R
R/calculate_parameter_derivative_polynomial.R
R/concatenate_data.R
R/concatenate_nii_rw_fsl.R
R/contrast_code_categorical_variable.R
R/convolve_afni.R
R/create_data_wrangling_report.R
R/create_design_matrix.R
R/create_flag.R
R/create_func_volume_by_voxel_heatmap.R
R/create_hrf_afni.R
R/create_phys_var.R
R/create_ppi_var.R
R/create_psy_var.R
R/create_trial_type_by_volume_list.R
R/data_wrangling.R
R/deconvolve_afni.R
R/detrend.R
R/downsample.R
R/execute_afni_cmd.R
R/extract_time_series_mean.R
R/extract_time_series_mean_rw.R
R/extract_time_series_rw_fsl.R
R/get_vif_tolerance.R
R/model_glm_roi2roi.R
R/model_lmer_roi2roi.R
R/model_roi2roi.R
R/save_data_wrangling.R
R/save_list_data.R
R/save_time_series_figure_from_list_data.R
R/save_time_series_heatmap_figure_from_list_data.R
R/scale_min_max.R
R/upsample.R
R/visualize_time_series.R
R/visualize_time_series_heatmap.R
README.Rmd
README.md
README_files/figure-gfm/unnamed-chunk-4-1.png
README_files/figure-gfm/unnamed-chunk-4-2.png
README_files/figure-gfm/unnamed-chunk-5-1.png
README_files/figure-gfm/unnamed-chunk-5-2.png
_pkgdown.yml
articles/data-wrangling.Rmd
bash/calculate_mean_func.R
bash/calculate_parameter_derivative_polynomial.R
bash/contrast_code_categorical_variable.R
bash/create_func_volume_by_voxel_heatmap.R
bash/create_phys_var.R
bash/create_psy_var.R
bash/deconvolve_afni.R
bash/detrend.R
bash/downsample.R
bash/extract_time_series_fsl.R
bash/extract_time_series_mean.R
bash/upsample.R
build_package.R
docs/404.html
docs/LICENSE-text.html
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/data_wrangling_report.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/build_afni_cmd.html
docs/reference/calculate_parameter_temporal_derivative_polynomial.html
docs/reference/contrast_code_categorical_variable.html
docs/reference/convolve_afni.html
docs/reference/create_data_wrangling_report.html
docs/reference/create_design_matrix.html
docs/reference/create_hrf_afni-1.png
docs/reference/create_hrf_afni.html
docs/reference/create_phys_var.html
docs/reference/create_ppi_var.html
docs/reference/create_psy_var.html
docs/reference/create_time_series_atlas_figure.html
docs/reference/create_time_series_heatmap_figure.html
docs/reference/create_trial_type_by_volume_list.html
docs/reference/create_ts_fig.html
docs/reference/data_wrangling.html
docs/reference/deconvolve_afni.html
docs/reference/detrend.html
docs/reference/downsample.html
docs/reference/execute_afni_cmd.html
docs/reference/extract_time_series_mean.html
docs/reference/extract_time_series_mean_rw.html
docs/reference/extract_time_series_rw_fsl.html
docs/reference/get_vif_tolerance.html
docs/reference/index.html
docs/reference/model_glm_roi2roi.html
docs/reference/model_lmer_roi2roi.html
docs/reference/save_data_wrangling.html
docs/reference/save_heatmap_figure_from_list_data.html
docs/reference/save_list_data.html
docs/reference/save_list_data_fig.html
docs/reference/save_time_series_figure_from_list_data.html
docs/reference/save_time_series_heatmap_figure_from_list_data.html
docs/reference/scale_min_max.html
docs/reference/upsample.html
docs/reference/visualize_time_series.html
docs/reference/visualize_time_series_heatmap.html
examples/analysis.Rmd
examples/data_wrangling.json
examples/data_wrangling.rds
examples/ppi-example-short.Rmd
examples/ppi-example-short.html
examples/ppi-example-super-short.Rmd
examples/ppi-example-super-short.html
examples/ppi-example.Rmd
examples/sub-control01_task-music_run-1_bold_space-subj_vox-32-24-38.csv
examples/sub-control01_task-music_run-1_bold_space-subj_vox-48-24-36.csv
inst/rmd/report_data_wrangling.Rmd
man/.DS_Store
man/build_afni_cmd.Rd
man/calculate_parameter_temporal_derivative_polynomial.Rd
man/contrast_code_categorical_variable.Rd
man/convolve_afni.Rd
man/create_data_wrangling_report.Rd
man/create_design_matrix.Rd
man/create_hrf_afni.Rd
man/create_phys_var.Rd
man/create_ppi_var.Rd
man/create_psy_var.Rd
man/create_trial_type_by_volume_list.Rd
man/data_wrangling.Rd
man/deconvolve_afni.Rd
man/detrend.Rd
man/downsample.Rd
man/execute_afni_cmd.Rd
man/extract_time_series_mean.Rd
man/extract_time_series_mean_rw.Rd
man/extract_time_series_rw_fsl.Rd
man/get_vif_tolerance.Rd
man/model_glm_roi2roi.Rd
man/model_lmer_roi2roi.Rd
man/save_data_wrangling.Rd
man/save_list_data.Rd
man/save_time_series_figure_from_list_data.Rd
man/save_time_series_heatmap_figure_from_list_data.Rd
man/scale_min_max.Rd
man/upsample.Rd
man/visualize_time_series.Rd
man/visualize_time_series_heatmap.Rd
ppi-example_files/figure-html/unnamed-chunk-3-1.png
ppi.Rproj
