consolidate_experiments: Consolidates Uncle Experiments

In eric-hunt/uncleR: an R package for parsing UNcle data

Description

This function consolidates experiments for a protein based on directory hierarchy. The hierarchy should be as follows from within the working directory where these functions will be executed:

Usage

consolidate_experiments(
  prot_dir,
  join_vars = NULL,
  legacy = FALSE,
  SLSheader = TRUE,
  DLSheader = FALSE
)

Arguments

prot_dir	a character string identical to subdirectory name of working directory where the experiment "Exports" folder is located for the protein being analyzed
legacy	a boolean value, TRUE if individual SLS/DLS spectra files were exported, FALSE if SLS/DLS "bundle" files were exported; default is FALSE
SLSheader	sets header argument for uncleR::import_SLSsum; defaults to TRUE
DLSheader	sets header argument for uncleR::import_DLSsum; defaults to FALSE

Details

<wd>/ <prot_dir>/ "Exports"/ "General Screen" "pH Screen" ...

The prot_dir argument should match the name of the protein subdirectory within the working directory. This is deliberate as it forces the user to make a coherent choice about which data to process. Exported summary and spectra should be contained within named subdirectories of a directory named "Exports" located within the prot_dir directory.

consolidate_experiments

Value

a named list of dataframes containing the consolidated data for each experiment

eric-hunt/uncleR documentation built on Dec. 20, 2021, 5:28 a.m.