Man pages for ericgoolsby/phylocurve
Phylogenetic Comparative Methods for High-Dimensional Traits
| compare.models | Compare evolutionary hypotheses |
| evo.model | Fit an evolutionary model |
| fast.geomorph.compare.evol.rates | DEPRECATED: Fast covariance-based implementations of... |
| fast.geomorph.compare.multi.evol.rates | DEPRECATED: Fast covariance-based implementations of... |
| fast.geomorph.phylo.integration | DEPRECATED: Fast covariance-based implementations of... |
| fast.geomorph.physignal | DEPRECATED: Fast covariance-based implementations of... |
| fast.geomorph.procD.pgls | DEPRECATED: Fast covariance-based implementations of... |
| get.aligned.function.data | Estimate aligned data for function-valued traits |
| get.tip.coefficients | Estimate regression coefficients for tip species curves |
| GP.fit | Fit Gaussian process curves to species data |
| K.mult | Test phylogenetic signal (Kmult) using phylogenetic... |
| multipic | Efficient PIC algorithm for multiple traits |
| nonlinear.fit | Fit nonlinear curves to species data |
| paint.edges | Paint tree edges based on species regimes |
| phylocurve | Ancestral curve reconstruction for logistic regression (glm... |
| phylocurve.generalized | Align curves of any shape |
| phylocurve-package | Phylogenetic Comparative Methods for Function-Valued and... |
| phylocurve.trim | Trim aligned curves |
| polynomial.fit | Fit polynomial curves to species data using stepwise... |
| prep_multipic | Prep multipic |
| print.evo.model | Print evo.model |
| sim.curves | Simulate function-valued curve evolution |
| sim.traits | Simulate multivariate trait evolution |
| ultraFastAnc | Ultra-fast maximum likelihood ancestral state reconstruction |
