base_plot | plot to compare snppit runs |
coho_genotypes | Genotypes of 1984 coho salmon over seven years |
coho_metadata | Sex, year, and spawner group of 1984 coho salmon over seven... |
compile_pedigree_sex_issues | Compile the connected components of parent pairs with sex... |
count_discrepancies | from pairs of duplicately genotyped samples, prepare a report... |
find_matching_samples | Find matching samples to a single representative |
genos2rubias | convert long format genotypes to rubias format |
partition_two_snppit_results | Partition the results of two SNPPIT runs by comparisons of... |
prepare_snppit_infile | prepare long-format genotypes for snppit |
prep_to_compare_snppit_runs | Prepare SNPPIT runs to compare them |
reformat_no_sex_or_date_results | After slurping in a SNPPIT run done without sex or date... |
reorganize_matching_samples | Relabel matching genotypes to a single ID and reorganize... |
run_snppit | prepare data for SNPPIT and run it |
slurp_snppit | Read the output from snppit into a format useful for... |
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