run_snppit: prepare data for SNPPIT and run it
In eriqande/HatcheryPedAgree:

run_snppit

R Documentation

prepare data for SNPPIT and run it

This returns the directory where it ran, so that you can slurp stuff out of there.

run_snppit(genotypes, metadata, additional_args = "", outdir = tempfile(), ...)

`genotypes`	A tibble of genotypes. Should have been reoranized if there were matching samples.
`metadata`	A tibble of metadata. Should have been reoranized if there were matching samples.
`additional_args`	A quoted string of additional (i.e. beyond the -f option) options and arguments to pass to snppit.
`outdir`	The directory to run SNPPIT in and in which to write the output.
`...`	Additional arguments to pass to `prepare_snppit_infile()`. Don't pass `outf` here, though!