write_all_mendel_files: Write all necessary files for Mendel to do a gene-dropping...
In eriqande/gdropR: Simulate Linked Markers Down Pedigrees

Writes all files in the directory Dir but does not launch mendel.

1	write_all_mendel_files(ID, Reps, Seed, Markers, Pedigree, Dir = ".")

`ID`	The ID or identifier of the run. This string will be prepended to all input and output files.
`Reps`	The number of replicate data sets to simulate.
`Seed`	The random seed to use. This must be a single integer between 1 and 30,000.
`Markers`	A data frame in the format of `long_markers` that gives information about marker positions and allele frequencies.
`Pedigree`	A data frame formatted like any component of `pedigrees` which holds the pedigree to drop genes upon.
`Dir`	The directory in which to write the files. It must be created already. Defaults to the current working directory.

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# make a temp directory to place things into:
tmpDir <- tempdir()
write_all_mendel_files("mendel-example", 10, 1234, long_markers, pedigrees$HS, Dir = tmpDir)