In evoclock/translateR: Translate nucleotide sequences to amino acids

The translateR package is a simple package that allows you to take a DNA or RNA sequence as input and produce an output that contains the sequence translated to IUPAC amino acid codes. This package only works with nuclear DNA sequences for eukaryotes. This function does not support ambiguity codes.

Installation

You can install this package directly from GitHub using the following code.

install.packages("devtools")
library(devtools)
install_github('evoclock/translateR', build_vignettes = T)

Example code

# load the package
library(TranslateR)

# store a DNA sequence
data <- "ATGtacacagctaaaGAacggauuuctacacatGAAGgtagagaggccacagagagcacguag"

# translate the DNA sequence to IUPAC amino acid codes.
Tslate(data)

evoclock/translateR documentation built on Nov. 12, 2019, 12:04 a.m.